Basic Information

Gene Symbol
Kdm5
Assembly
GCA_947095525.1
Location
OX352732.1:1752286-1754799[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.9e-20 3.6e-17 63.0 0.1 3 88 94 175 92 176 0.93

Sequence Information

Coding Sequence
ATGAATAGCAAGAGTATTCAGAAAAATGCGTTGTTTAAACAAGCAGAATTTAAGTTTACTGTACCTCCTGATGCACCTATATTCCAGCCTACGCCTGAAGAATTCATGGATCCCTTTGGGTATATATCAAAAATTCGTCCAATTGCCGAAAAGAGTGGCATATGTAAAATAATTCCACCGTCGCGCTGGCAGCCGCCGTTTTCATTAGACGTGGACAAATTCAAATTTGTCCCACGAATACAAAAATTGAATGAGTTGGATGCCATTACGCGTTTAAAACTATTGTTTGTAGAGAAGATCTTCATATTTTGGGAGCTGCAGGGATCGCCTTTGAAAATACCGTTGATCGAAAATAAGCCTTTAGATTTGTACTGTCTCAAATTTTGGGTTGATGAAGGAGGTGGCTTTGAAAAATGTAATACCACAAAACAATGGCCACATATCTCTAATGTAATGGGTTACAGCCAGAACATAAGTACCATGTATTACCTTAAGAATAGTTACGAAAAAATATTGCTACCATATGTGAAGTTTGAAAAAAATAAAGCAATTAATCTTAAACCTGTAAAAAAAGCTAAACAAAAAATTGAAGTAAAAGAAGAAGATGAAAATTTATTAATTACTAAAGTACCAAAACAAACAATAAAAAATCCAACTGAAATTGAGCCTGACACAGTTATAATAGATGAAAACCCTCTCACAAATATACAAAAAACAGGGTCAGATAATAAACCTGATAATCAAACTGATAATAAACCTGAAAATGAATTTGATAATCAATCTGATAATAAACCTGGTAATCAACCTGATATTACTAGAACTAAATCTGAGACTAGGAGATTTAACTATGGTTGTAGAGAATTACAAAGATTAGCATGCTATGGGCCAGGACCAAAAATGCCTGCTCTTACTGATGAAGAGACTAAATTGTTTACCTTAAGCCAACGAAAGAGGCCACGCTATGATCTTGATCCATTATCTATTTATCAATGTGTTATCTGCCACAAAGATCAGAGGGATGATCTCTTGATATTTTGCAATGGTTGTTCTGTTACATATCACACATTTTGTCTAAAGCCTCCGCTCGATTCATTACCAGATGAGTGGCAGTGTTCTAGTTGTATTGCAGAACATGTGCGTAAGCCTGCAGAAGCATATGGCTTTGCTCAGGCTGAAAAGGAATACACATTACTAGAGTTTGGTGATATGGCAGATAAATTTAAATCAGATTATTTTGGTATATCTGGACACTTAGTGCCAACAACAGTTGTTGAAAAAGAATTCTGGAGAATTATTTCAAGGATAGAAGAAGATGTTACAGTTGAATATGGTGCTGATCTTCACTCCATGGATCATGGGTCAGGCTTCCCCACTAAAGCTTCTCTGAATCTATATCCTGCTGACCAAGAATATGTTGATTCAGGATGGAACCTAAACAATCTGCCTGTTAAAGATGGATCAGTTCTTAAATTCATAAATGGTGATATATCTGGCATGACAGTTCCATGGATGTATGTCGGTATGTGCTTTGCAGCATTTTGCTGGCACAATGAAGATCACTGGAGTTACAGTATTAATTATTTACATTGGGGTGAAACTAAGACTTGGTATGGTGTACCAGGCAGTAGTGCAGAGTTACTAGAAAATACAATGAAGGCGGCAGCACCAGACCTTTTTGAATCACAGCCCGACTTGTTACATCAACTGGTGACTACGATGAACCCAAATATTTTAATGGATGCTGGGGTACCAGTGTGCAAGATTGATCAAAATGCTGGTGAGTTTGTTGTTACATTCCCTAGAGCATACCATACAGGATTCAACCATGGATATAATTTTGCTGAAGCTGTCAACTTTGCACCTCCTGATTGGCTCAAAATAGGACGTCAATGTATATCACATTATAAAAATATAAAAAGATATTGTGTATTTTCTCATGATGAATTGGTTTGTAAAATTGCATTAGATGGAGACCGCTTAGATTTGGCAACTGCATTAGGAACACAGAATGAGTTAGTGAAAGTAAGCGAGGAAGAACACTGTTTGAGAACTATGTTAACTAAGAAAGGGATAACAAATATGCATAGGACTGCCTTTGAGTTACTTGGTGATGATGAGCGTCTTTGTGAGGTTTGTAAAACAACATGCTTCTTGTCCTCAATAGCTTGTAGCACTTGTAAGCATATGGTTTGTCTGCAGCATGCAGATGACTTGTGTCAATGCAGTACGGACAAAAAAACGCTACACTTCCGTTATGACATGGATGAAATAAAAATTATGTTGCAAACAGTAGATTTTAGAGTATGTAGTTATGATAAGTGGATGTCTCAAGCCAACAATATATTAAATCCTAATACACCCAAAGTTGGCAAAATACAAAAAATTAAAGAATTATTAAATGACGCAGAAGAACTTAGTTTACCTATATGTCCACAGCTTACACTATTGAAAGAAGAATATGCTGTTATGACAAAGAATATGGAAACAGTTATTATAGAAATAGATGATGATTAA
Protein Sequence
MNSKSIQKNALFKQAEFKFTVPPDAPIFQPTPEEFMDPFGYISKIRPIAEKSGICKIIPPSRWQPPFSLDVDKFKFVPRIQKLNELDAITRLKLLFVEKIFIFWELQGSPLKIPLIENKPLDLYCLKFWVDEGGGFEKCNTTKQWPHISNVMGYSQNISTMYYLKNSYEKILLPYVKFEKNKAINLKPVKKAKQKIEVKEEDENLLITKVPKQTIKNPTEIEPDTVIIDENPLTNIQKTGSDNKPDNQTDNKPENEFDNQSDNKPGNQPDITRTKSETRRFNYGCRELQRLACYGPGPKMPALTDEETKLFTLSQRKRPRYDLDPLSIYQCVICHKDQRDDLLIFCNGCSVTYHTFCLKPPLDSLPDEWQCSSCIAEHVRKPAEAYGFAQAEKEYTLLEFGDMADKFKSDYFGISGHLVPTTVVEKEFWRIISRIEEDVTVEYGADLHSMDHGSGFPTKASLNLYPADQEYVDSGWNLNNLPVKDGSVLKFINGDISGMTVPWMYVGMCFAAFCWHNEDHWSYSINYLHWGETKTWYGVPGSSAELLENTMKAAAPDLFESQPDLLHQLVTTMNPNILMDAGVPVCKIDQNAGEFVVTFPRAYHTGFNHGYNFAEAVNFAPPDWLKIGRQCISHYKNIKRYCVFSHDELVCKIALDGDRLDLATALGTQNELVKVSEEEHCLRTMLTKKGITNMHRTAFELLGDDERLCEVCKTTCFLSSIACSTCKHMVCLQHADDLCQCSTDKKTLHFRYDMDEIKIMLQTVDFRVCSYDKWMSQANNILNPNTPKVGKIQKIKELLNDAEELSLPICPQLTLLKEEYAVMTKNMETVIIEIDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-