Tper000229.1
Basic Information
- Insect
- Trionymus perrisii
- Gene Symbol
- gata1-a
- Assembly
- GCA_900050545.1
- Location
- FIZV01045659.1:19534-24836[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.96 5.3e+03 -2.3 0.4 21 26 56 61 52 62 0.81 2 2 2.5e-15 1.4e-11 44.4 2.8 1 34 584 616 584 617 0.98
Sequence Information
- Coding Sequence
- ATGACTGCTGCGCATTTAAATCTTTATCAAGTTTGTCGCCTTTGTTTGTGCGAGCTGAATGGCTCGTCGTTTGTACCGATATTTGATAACAAAGATAGTAACTTACCATATAAGATAAAATCctgtttttccatttctGTTGATGAAACAGATCGTTTACCCAATGTTTTATGCCCAGCTTGTACTAGAGATGTAGAACGATTTTAcaagtttaaagaaaaagttatcaagAATAATGCTTTCCTCAAGTCGTACGTTTTTCAGCGAGACCGCAAGGCTGCTCAATTTCTGGGTCGTGGTAAAGATGAAACGAACACCGTTGTGGAGCCACCGACTATGAAAAAACGCGCCACCGCTGGGCCCGCAGCTTCGGTCAAAGGAAAACGTACGCCGTCCAAAGCGAAAGCAGCCGATTATCCGGAATCTGCAACCGCTACCGCCGAATGCCTGCCGACGTTGAATAATTTCGACAATTGCGAACTATCGAATACTTTTTTCGACAACAGCAATAAAGTCAAGGTGGAAATCATTCCGCAAGTAGACAACGACATGTACTCGTCTACCAGCGCCATATACAGCAGCGATACGAAAAGCAACATCGTCGAAATGTGGCCGTCGTCCATGTCGAACGAAGACGGCTCGTCTAACTTTCGCAACGGTAGAAATATAGAAGAGATCGCCACCACTACGATCGAAAGCTCGTCCAAATCGCCAGATTACACCAGCGTTATACGTCATAGCAGCGACGACTACGGTAATAGTAATTCGTCGTACGATAAATATATCAGCGTTCACGTCAAAGAGgaaatttgtaaagaaaattcgGGCGAAGAGTACGACTCGGAGGATACAAAATCCGCTGCCTCGTTGACGTTTCGCGAAGAAGACGAAGATAAACTGATCATCGACGAGGAAACCATGGAAGTTAAACCGTACGTCCACGGACGCGAGGCCGCGAAAACATCTGACAGTTGTATTTTGTTGCGCACGCTAATCTCGACATCCAACGCCGCCAACTCGAATCAACCGGTCAGAGGCGAGACAGTCAAGAAACCAGCCACTTTCTCTCCACAAATATTAGTGAGCGACACGTTGGCCAATTCGCCAAATTCGCAGAATTCGCAGAGCGGCGGCTCCAACACACCTACCTCAGAGAAAAGCAGCACCAGGCGAAAGCAACGATGTCCTACGAAGGCCAGCGAAACAGCGGCCGAGTTGGGCGACGAAAGCGACGAAGACGCCGCCGAATTAGCGCCGCTCAGCGAACAGCACCCGCAGTCGATGATGTACCAGCAGGAAATCGTTAACATTAGCCCGGTCACGGTGACGTGTACGTCCAACGGACGAGAAGAAATCGTCGGATATAATCAGTCGCAATTTTTAGACgagGACGAATTACAGGTGTTATCTAGGCACAGCTCGCCGGCCACAACGCCGCCCATGGTAATGCCTTCGCAAGCCGAAAGATTACATAAAGCGTGCGACGTGCTACTCAGAGCGGCCagcaaaattcaagatttaccTCCCGGTATACAGCAGGAGGAGGTGGTcgtcgaagaagaagaaagcaTAACCTTGTATCCTAACAGTTCCCAAATAGAAGGCCAGAGCGAACAAATAACTATTCGCCACAATCCGGTGCCGTTGTACGAAATCAACTTCTCTTCGGTGAACGCCATCAGCGAGACCCGCGTTACTAAAAAGATTAAATCGCGCGAAAAAATACAGAACATGTCTCAGCATAAAGAATGTAATAATTGTCACGCCGTACAGACCACCATTTGGAGACGAGACAGATTTGGCAATATCGTCTGCAACGCTTGCGGATTGTACTATAAATTGCATAATTACGATCGTCCGTGTAGAATGCGCCGAGATGAGATACACAAACGTAATCGTAAAAGAAACGCCAacgaaagtaaataa
- Protein Sequence
- MTAAHLNLYQVCRLCLCELNGSSFVPIFDNKDSNLPYKIKSCFSISVDETDRLPNVLCPACTRDVERFYKFKEKVIKNNAFLKSYVFQRDRKAAQFLGRGKDETNTVVEPPTMKKRATAGPAASVKGKRTPSKAKAADYPESATATAECLPTLNNFDNCELSNTFFDNSNKVKVEIIPQVDNDMYSSTSAIYSSDTKSNIVEMWPSSMSNEDGSSNFRNGRNIEEIATTTIESSSKSPDYTSVIRHSSDDYGNSNSSYDKYISVHVKEEICKENSGEEYDSEDTKSAASLTFREEDEDKLIIDEETMEVKPYVHGREAAKTSDSCILLRTLISTSNAANSNQPVRGETVKKPATFSPQILVSDTLANSPNSQNSQSGGSNTPTSEKSSTRRKQRCPTKASETAAELGDESDEDAAELAPLSEQHPQSMMYQQEIVNISPVTVTCTSNGREEIVGYNQSQFLDEDELQVLSRHSSPATTPPMVMPSQAERLHKACDVLLRAASKIQDLPPGIQQEEVVVEEEESITLYPNSSQIEGQSEQITIRHNPVPLYEINFSSVNAISETRVTKKIKSREKIQNMSQHKECNNCHAVQTTIWRRDRFGNIVCNACGLYYKLHNYDRPCRMRRDEIHKRNRKRNANESK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01178076;
- 90% Identity
- -
- 80% Identity
- -