Tper011435.1
Basic Information
- Insect
- Trionymus perrisii
- Gene Symbol
- Zfy1
- Assembly
- GCA_900050545.1
- Location
- FIZV01026998.1:4097-11808[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.0011 0.12 13.5 1.2 1 23 305 328 305 328 0.96 2 22 0.027 2.8 9.2 0.3 3 23 391 412 389 412 0.92 3 22 0.09 9.2 7.5 0.8 2 23 419 441 418 441 0.96 4 22 1.6 1.6e+02 3.6 1.7 1 23 452 474 452 474 0.92 5 22 0.0037 0.38 11.9 3.0 2 23 500 522 500 522 0.95 6 22 5.9 6e+02 1.8 2.5 2 23 566 589 565 590 0.90 7 22 1.8 1.8e+02 3.5 0.3 2 23 599 621 599 621 0.90 8 22 0.046 4.7 8.5 0.1 3 23 629 650 627 650 0.94 9 22 0.0017 0.17 13.0 0.8 3 23 661 681 659 681 0.96 10 22 4.1 4.1e+02 2.3 0.0 2 23 701 724 700 724 0.92 11 22 0.0019 0.19 12.8 1.4 1 23 727 750 727 750 0.96 12 22 0.039 4 8.7 1.5 2 23 757 779 756 779 0.95 13 22 0.00058 0.059 14.4 1.8 1 21 854 874 854 875 0.95 14 22 0.016 1.7 9.9 0.6 1 23 903 926 903 926 0.96 15 22 2.4 2.5e+02 3.1 0.2 8 23 941 957 929 957 0.75 16 22 0.011 1.1 10.4 0.1 2 23 964 987 963 987 0.93 17 22 6.3e-05 0.0064 17.5 0.9 1 23 994 1017 994 1017 0.97 18 22 5.8 5.9e+02 1.9 0.7 2 22 1055 1075 1054 1077 0.69 19 22 0.0023 0.24 12.5 0.7 2 23 1083 1104 1082 1104 0.94 20 22 0.013 1.3 10.2 0.6 1 23 1233 1256 1233 1256 0.93 21 22 0.94 96 4.3 3.2 1 23 1335 1358 1335 1358 0.95 22 22 0.013 1.4 10.2 2.0 1 23 1401 1423 1401 1423 0.98
Sequence Information
- Coding Sequence
- ATGCAAGAAATCGACGCATCCGAAatcaaaacgaattttcacgAATTATGCCGGCTTTGCGCTTCGTACGACAATGTGAAAATCGGACTGTTTACTGAAGAAGGAGTGAAAAGGCAGctacgtaaaaaaatccaaatctgTCTACCATTTAAGGTTGAAGAGAATGATGGCTTTCCAAAATCTCTCTGTTTCAAATGCGTTTACAATTTGGAAACAACTTACGAATTCAGATGTAAATGCATACAAGTTAATCGAAGTTTGGAAAAGCATCTGTACcaattgGAAAGAGATAAACAGTCGAAAAATGTGATACCTGGTCGGTCGTACAAAATTCATCCCGAAGTTTCCATCTTCGCAATATCCACCGAGTCGAGTAAAGGCAAGCAGAACGAACCGAAATGTAATTTACCCGCCGAGTGCGAAGAAGAATCGCCGAATCCATTGGATTTTCTCGAAGTTGGTGTCAGTTCCGACGATGGTTCAAACATCCGTCCAAAACCCGGTTTTCAAGACTGCAAGAAATCTCACTTATGGAAGACCGATCGAAGATGGCTCTCAGTTGAGCATAAACCACTTCATAACGACTCGACGCTGCAACAAGATGATAGCGCCAAAGTGAACATGAAATATTTCGACACGTCGACGCCGGATGATAACGGAAGCCGAAGAAAAAGCTGTAAACCGCGAAGAATTACTCGAGAAAGCGAAGAGTGCGGCGCCGCCAATACGCACTCGTCGCCGTCGTCTTCGCAGGCGGCGAAATCGGTTGGTCGACTATTTGACGACGGCGACGTTGCTAGTTTCAACCAAAAGCAAAAGGATagcgaagaaaaagaagattgCGTCGTCTCAGCTgctgccgccgccgccgccgccgatgatgacgacgacgaatcGCCCCAACAAGAACGATTTACATGTTTATTGTGCGAAAAGAGCTTCGGATTGCGTTCGTCGctgaataaacatttttcgacGATACACGGTATCGAGCCCTACGAAGTGGTGTCGCCTCCGCCGGCGCCGCCGTCGGCGTTGCCTCTGCAAAGTAGAGCGCTGCTGTCGCAACAGTCGTTTGTTACGCCGCTGACGACGAACGCGACATCGTCGGAGGCGTCTAAAAACGAAGAGGATTTAGAAAACATGATGGAACAAGAGACGGTGATATTTTGCGAAGTTTGTCGGCGCGAATTCCAAGATCGCGCCAGTTTGTGGTTGCACATGGTGCACGCGCATCGCGAAGAGGCGAGCGTGTCATGCGGCATTTGCCTGAAGATCTGCTGCGACAACATCACGTTAATCGAGCACGTGAATACGGCGCATTCGGGCGATAAAGCGATCGTGCAGCGTCGGTATTCGTGCCAGGTGTGCGGTCGGCAGCACGATTCACGTCAGAAATTGCTCAAGCACGCGACGCTGCACACGTTGATCGACAACCAGGGTCAAACCATTCAGCCCGAAGAGATGGTGTCGCTGAATAACGCGTTCGCGCCGCGCGAGTGCCCCATATGCCGTAAACGTTTCTTCAACGAAGAGAAGCTCAACCACCATACGCAGAATTTCCATAACGACGCCAACGACACGACGTTGTCGCCGTCCACCGTGTACAAATGCGAGTTGTGCGCTTCGGCGCACGCCACCCGTATCGACCGCTGGTGGCACATGTACTATTCGCATTTGGGCGACGCACGCGTCACCTGCCAACGTAAAAACTGTCGCAAAATATTCGTCTCGACGACGCTGAAGGAGGAACACGCGAAAACGCACCACGAATCGCAAGGCGAATTCACCAACACGTGCGAAATCTGCGGCAAATTGTGGGAGTCGCGTACCGTCTTCTACAAGCACATGATGAACGTGCATCCGAAATGTTTGCCCACCATATGCGGCATCTGCATGAAGATTTTCAGCAACGTGCCCGAGCTGCGGCAACACGTGCGAGGCGATCATCCGCCGCTCGAAGAGTGCGGCGGCATATGCTGCGACGTGTGCGGACGGCCGTACGCCGAACGTTCGAAAATGCTGCGTCACCGTCGCGTGCACAACGTGACGGACGGCGTTCCAACCGCCACCAGTACGGTAAAGAAGAAAGACGATCTGGTGTGCAGCTTCTGTCCGGACGTCAGCTTCGAGCAGTACGAGGACGTAGCTCAACATCGGCGCGTCGTTCATCAGCTCTTCGTTTGCGACCTATGCCCGAAATTCTACAACGGCAACAATCACCTTTGGAAGCACGTCAGCAAGCAGCACAAGGGCGATCCGAACGTCACTTGCAACCTGTGTCTGCGCACCTCCGCCAGTCGGGCGCATCTCGAACGTCACAAAATCAAATACCATTCCGATCCGGTCGATAAGCTGCTGAAtaagcagcagcagcagcagcagcaacaacagcaacaacaacaacaacaacaacaacagcaacaacaacagcagcagcagcagcaacagcaaAAACAACAGTTGCAGCTGCAACAGGGCTACGCCGTTGGTACGAGTTTGCTCGCGGCCGCGTCCTCGACGCAACAACAGCAACTGCAGCTGCAGCCGCAACAACCACATAAATGCAGCCTTTGCGGTAAGCTGTTCCGCATACGAAGCTTGCTGAAGAAACATTTGAAATCGTGCAAAGGTGTTAAAGCGATAGGCGCGTCGGCGGCGGCCGCGGCCAAAATCACAGCCAAAGTACTGCCCGTCAACGGGGTATTTCCATGCTCCAAGTGCGCCAAAGTTTTCCAGCTGCAAAGCGTACTCTCGAAACACGTGAAAAATTCGCACGCTCAGCACGCTTGCGAAGTTTGCCAGACGGAGGGCGAGGTCAGCGCGTTCGACACGAAGAAAGGCTTGTTGCAGCATATACGCCAACGACACGCCGACAATTGCGAGTTGGTATGCGACGTGGTCGGTTGCGGCAAGGTGCTGCGTTTGAAGGCCGACCTCAAGAAGCACAAATTGGAGCACCAACGCGGCTATTTCACCTACATTTGCGAAATCTGCGGCGATATGTTTTCGAATCGCAAAAAACTACGCAAACATCTGCTAACCTATCATAAGGCGGACGTGAAATATTTGTGCGCCATTTGCGCCTCCATTCACCAGTCTGTAGACCAACTCGTACAACACGTGCACGGCGCGCACTCGGTTGTGCTGCATCGGCCGTGCACGTGTCAGATTTGCGGCAAAAATTGGACGGTCGGCAGTAAGGTGGTCGACCACATTACCAAAGTTCACGGTGCCGAGTACAAGCCGTGCCGCATCTGCTGGAAGGTGTTCACGGACGAACACGCCTTTCAACAGCACGTCGATAATCATCCGGCCGTCGAAGAAAAAACCGCGCCACCTTCTTCCGCctccgccgccgccgccgcagCCGCTACTAACGCGGCTGCGCCAGGTGACGCCGCAGTCACTTCGGACGAGAGAACGACGCTAGTTCCGTCACGTTCTTCGTCTTCTTGCTCGATCGTGGATGGCGACAGCggcggtggtggtggtggtggtgattCCGAAATAGTAGACTGTAGCGCCACAGTGAAAAAACACGACGACCACCGAGCGGCGGGCATCGTTGCCGGTGTAAAGAGGCCGCTGGATGACTCGTCGTTATGCGACGACAACGgcgacgaagacgacgacgagaaCGAGAACGAAAACGGAAACGAGAACGAGAACGCCAGCAAACGTCTTCGGCGAAAATACAAATGTATTTGGTGTAAGGAAAGCTTCCGTTCTACGGACGAGCTAAAGGAGCACAAAATGGCGCAACACGCCGATAACCAACAGCAACGAAAATTGAGTGGCGTCGAAAATGACGCTGGCGTTAGGAGCGGCGCTACCGCTATCGCAGCCGAAATAAAGCCTACGAAGATGGAACTGGACACGAACCGAACGGAACGATGGACCGACATTCGTCCGATCGCTTGCGACTGTTGcgagaaaatttggaattccAAGAAACAACTGTGGCAGCATCTGATTCGTTCGCACGCCTACGAATCGCAGCACACGTGCGGTATCTGTTTGCAGGTTTGCCGCGACTATTTCGATTTGTTTTACCATTTAGACTCGCAGCATTCGGACGCGGTGAACGACGCGGTCGCCAACCGATTCGCGTGCTTCATTTGCGGTCACTACCATAACTCGCAGAGTAAGCTCGACAAGCATTTTTCGCTGCATAAAAATGCGCCGTCTCGATGCGAATACACTTGCCAGTATTGTCGCAAATTGTACAAATCGGTAGCTTTCTATCGCGATCATATGCGCGCGCACGAAGCCGAGCTGCCGGCCGAAACCAAAACTAAACCCATCTCCGAATTCAGCGGATTCAGCATTAATCATATTTTGGCGACGAAAAACGATCGATCCCGCAGCTTGACCAACGTCGTCGTCGCTCCCGCTCCTGTTCCTGTTTCTGCTCCAACTTGCACGTCAACTACGGCAGCGGTGGTTAAAATCGACGCTCGGCCCGAATCCAGGTACAGAGCTTCTTTCGATCGAAGCGAATACGATCGTAAAGTCAAGGACGAAAATATGGAAGAGTTGATCGAAGAAttggacgacgacgacgacgacgacggcaGCGTTAACCAtgacgacgaagacgacgtGGAAGACGTCGAACGGATTCCGGCTCAGGGTAGCGACGTTCGACTGCCCATTTCGACTGTCGGTCGACAAAGCCATAAACGAACAGAATCAACGCCTTCCGAAGCTTACGCCAACATTTCGGGCAGCGAcgacgaaatcgaaaattgttctgtgaagaacgagaacgaagacgaagacgaagacgaagatgacgacgacgacgataacGACGAAAGCGGTAACGTTATGCTGAACGGTGGCAGCGGTACTGATAACGATTTTGCCGCCTTCGGTATGAACAATAATCAAAAACAACGCGCAGCTAGACATTCGGTGTCAACCTGCGCAGCGGTTGTATCGAATGCTGCCATGCCTGTGGACGACGATTCTGTCCACTTGCAAATCTATGAAATGTATACGCAATGGTaa
- Protein Sequence
- MQEIDASEIKTNFHELCRLCASYDNVKIGLFTEEGVKRQLRKKIQICLPFKVEENDGFPKSLCFKCVYNLETTYEFRCKCIQVNRSLEKHLYQLERDKQSKNVIPGRSYKIHPEVSIFAISTESSKGKQNEPKCNLPAECEEESPNPLDFLEVGVSSDDGSNIRPKPGFQDCKKSHLWKTDRRWLSVEHKPLHNDSTLQQDDSAKVNMKYFDTSTPDDNGSRRKSCKPRRITRESEECGAANTHSSPSSSQAAKSVGRLFDDGDVASFNQKQKDSEEKEDCVVSAAAAAAAADDDDDESPQQERFTCLLCEKSFGLRSSLNKHFSTIHGIEPYEVVSPPPAPPSALPLQSRALLSQQSFVTPLTTNATSSEASKNEEDLENMMEQETVIFCEVCRREFQDRASLWLHMVHAHREEASVSCGICLKICCDNITLIEHVNTAHSGDKAIVQRRYSCQVCGRQHDSRQKLLKHATLHTLIDNQGQTIQPEEMVSLNNAFAPRECPICRKRFFNEEKLNHHTQNFHNDANDTTLSPSTVYKCELCASAHATRIDRWWHMYYSHLGDARVTCQRKNCRKIFVSTTLKEEHAKTHHESQGEFTNTCEICGKLWESRTVFYKHMMNVHPKCLPTICGICMKIFSNVPELRQHVRGDHPPLEECGGICCDVCGRPYAERSKMLRHRRVHNVTDGVPTATSTVKKKDDLVCSFCPDVSFEQYEDVAQHRRVVHQLFVCDLCPKFYNGNNHLWKHVSKQHKGDPNVTCNLCLRTSASRAHLERHKIKYHSDPVDKLLNKQQQQQQQQQQQQQQQQQQQQQQQQQQQQQKQQLQLQQGYAVGTSLLAAASSTQQQQLQLQPQQPHKCSLCGKLFRIRSLLKKHLKSCKGVKAIGASAAAAAKITAKVLPVNGVFPCSKCAKVFQLQSVLSKHVKNSHAQHACEVCQTEGEVSAFDTKKGLLQHIRQRHADNCELVCDVVGCGKVLRLKADLKKHKLEHQRGYFTYICEICGDMFSNRKKLRKHLLTYHKADVKYLCAICASIHQSVDQLVQHVHGAHSVVLHRPCTCQICGKNWTVGSKVVDHITKVHGAEYKPCRICWKVFTDEHAFQQHVDNHPAVEEKTAPPSSASAAAAAAATNAAAPGDAAVTSDERTTLVPSRSSSSCSIVDGDSGGGGGGGDSEIVDCSATVKKHDDHRAAGIVAGVKRPLDDSSLCDDNGDEDDDENENENGNENENASKRLRRKYKCIWCKESFRSTDELKEHKMAQHADNQQQRKLSGVENDAGVRSGATAIAAEIKPTKMELDTNRTERWTDIRPIACDCCEKIWNSKKQLWQHLIRSHAYESQHTCGICLQVCRDYFDLFYHLDSQHSDAVNDAVANRFACFICGHYHNSQSKLDKHFSLHKNAPSRCEYTCQYCRKLYKSVAFYRDHMRAHEAELPAETKTKPISEFSGFSINHILATKNDRSRSLTNVVVAPAPVPVSAPTCTSTTAAVVKIDARPESRYRASFDRSEYDRKVKDENMEELIEELDDDDDDDGSVNHDDEDDVEDVERIPAQGSDVRLPISTVGRQSHKRTESTPSEAYANISGSDDEIENCSVKNENEDEDEDEDDDDDDNDESGNVMLNGGSGTDNDFAAFGMNNNQKQRAARHSVSTCAAVVSNAAMPVDDDSVHLQIYEMYTQW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -