Basic Information

Insect: Trionymus perrisii
Gene Symbol: -
Assembly: GCA_900050545.1
Location: FIZV01053791.1:12975-15889[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.17 18 6.6 0.6 1 11 238 248 238 256 0.93

2 10 7.3e-06 0.00075 20.4 0.5 2 23 269 291 268 291 0.96

3 10 0.0014 0.14 13.3 7.7 1 23 296 318 296 318 0.97

4 10 4.8e-05 0.0049 17.8 3.1 1 23 324 346 324 346 0.98

5 10 5.7e-05 0.0058 17.6 2.1 1 23 358 380 358 380 0.98

6 10 0.00056 0.057 14.5 2.4 2 22 390 410 386 410 0.93

7 10 2.6 2.7e+02 2.9 1.7 1 16 417 432 417 439 0.71

8 10 8.8e-07 9e-05 23.3 2.2 2 23 446 467 445 467 0.97

9 10 1.6e-05 0.0017 19.3 2.4 1 23 473 495 473 495 0.97

10 10 0.033 3.4 8.9 1.5 1 23 501 523 501 523 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.17	18	6.6	0.6	1	11	238	248	238	256	0.93
2	10	7.3e-06	0.00075	20.4	0.5	2	23	269	291	268	291	0.96
3	10	0.0014	0.14	13.3	7.7	1	23	296	318	296	318	0.97
4	10	4.8e-05	0.0049	17.8	3.1	1	23	324	346	324	346	0.98
5	10	5.7e-05	0.0058	17.6	2.1	1	23	358	380	358	380	0.98
6	10	0.00056	0.057	14.5	2.4	2	22	390	410	386	410	0.93
7	10	2.6	2.7e+02	2.9	1.7	1	16	417	432	417	439	0.71
8	10	8.8e-07	9e-05	23.3	2.2	2	23	446	467	445	467	0.97
9	10	1.6e-05	0.0017	19.3	2.4	1	23	473	495	473	495	0.97
10	10	0.033	3.4	8.9	1.5	1	23	501	523	501	523	0.95

Sequence Information

Coding Sequence: ATGTTGCCATCAGAATTGACCGAACTATGTCGTTTGTGTTTAATCAAAGATCAAGTAGATGTgaacatctttgaaaatgactcTAAGGATATTTATTACAGAATTTCTACATGTCTTCCAGTCACTATTACTATAGAAGATAAACTACCAAAAAAGATATGTTTGACTTGtgttaataaaataaacatgTTCTACGATTTTTGGAATCAAACGTTGAATGCAGAGAAACATTTGTTGTCTTGGCTTGAACCTACATCATTGAACAGTATCTGCAAAAACTCTCAATCTTACTCGTATTCTTGCACTTCGGagGGAAGCGATACAAATATCAATAATCACAGTACGGGCGTTTCCAGCGATGAAAATAATGCAGAAAgcgatttagaaaataatgtgAACAAACGCCGTACTAATGCAAAACCTAAAGATTCTAATAAGCCTAAAAGTAATCAAATACTTAATGTGGACTATCAAGATGAAAAACCGGGACCTTCTGGTTTTCAAGTTGAACAAACTTCAGCGCTGAAACAATTACAAGGgtataccGACGAATTGGCTAATAATTCGTTGAGTaacttatcgaaaattttccaagtactAAATAGTCCGGAAGATATGTCAGAGAGTGCATTATCGCCTGCTTTACCATCACCTTCACCTGTACCTGAAAAGCAACTCAACACAAGTGATCATTTTGACGTCGAACCTTTGCATAAATGCGAAACATGCAATAAAGCATTTTCTTGCGAAGATATTTTAGCTGTGCATAAATTGAGTCAATGCAAAGATCAgagcgaaatgaaaaaatgctatTTGTGCGATGAAACTTTCTCAAATCCTTCAAAACTAGCCGAGCACATGAAAAACATTCACGACGATCGTAAATTTCAATGCGAAGAATGCGGCAAATGTTTCTTAACAAAGCATCATTTGCGTATGCATAGTTCGATGCACTTGGATTCTAAGCCATTTTCGTGCCAGAAATGCGGTACCAATTTTCGGTACAAGAAAACCTACGAAACGCATATTAAAATCCACGCCAACGAGAAGAAATCAACCGACGAACAGACCTTTGTTTGCGATATTTGCGAGCAACGTTTTTCCACGCGTAATTCCTATATACATCACGCCCGAAGCCATAAAAACGTTACTGGTAAATGTAAACTCATGTGTTTCGTTTGTAATCAAACCTTTGCCTCGAAACGTATGCTAACTCAGCATTTACGCACACAATGTGGAGAAAAAACTCATACGTGTGACGTATGTGGAAAAGAATTGTTAACTAAGGAGTCGTTAGATTGTCATAAACTTATACACGTCGATGAAAAATCCTTAGTTTGTAAGATTTGCGGTAAGACATTTTCACATCGTAAGTACTTCGTTGTACATCAACGTATACATACCGGTGAGAGACCATATAAGTGTATCACTTGTAATAAAACTTTCACTCAGGCATCTACATTAACTGTTCATCGACGGTATCATACCGGAGAACGTCCATATAAATGTTTTGTATGTTCTAAAGGTTTTGTTACTCGCACTATAATGTTATCTCACttgaaatatcacaaaaaatcgtga
Protein Sequence: MLPSELTELCRLCLIKDQVDVNIFENDSKDIYYRISTCLPVTITIEDKLPKKICLTCVNKINMFYDFWNQTLNAEKHLLSWLEPTSLNSICKNSQSYSYSCTSEGSDTNINNHSTGVSSDENNAESDLENNVNKRRTNAKPKDSNKPKSNQILNVDYQDEKPGPSGFQVEQTSALKQLQGYTDELANNSLSNLSKIFQVLNSPEDMSESALSPALPSPSPVPEKQLNTSDHFDVEPLHKCETCNKAFSCEDILAVHKLSQCKDQSEMKKCYLCDETFSNPSKLAEHMKNIHDDRKFQCEECGKCFLTKHHLRMHSSMHLDSKPFSCQKCGTNFRYKKTYETHIKIHANEKKSTDEQTFVCDICEQRFSTRNSYIHHARSHKNVTGKCKLMCFVCNQTFASKRMLTQHLRTQCGEKTHTCDVCGKELLTKESLDCHKLIHVDEKSLVCKICGKTFSHRKYFVVHQRIHTGERPYKCITCNKTFTQASTLTVHRRYHTGERPYKCFVCSKGFVTRTIMLSHLKYHKKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00194676;
90% Identity: iTF_00194676;
80% Identity: -