Tper000924.1
Basic Information
- Insect
- Trionymus perrisii
- Gene Symbol
- ZNF131
- Assembly
- GCA_900050545.1
- Location
- FIZV01034780.1:1251-3275[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 7.6e-05 0.0077 17.2 4.5 2 23 274 295 273 295 0.96 2 12 1e-05 0.001 20.0 2.9 1 23 300 322 300 322 0.98 3 12 0.48 49 5.3 6.4 1 23 341 363 341 363 0.97 4 12 4.2e-05 0.0043 18.0 1.5 1 23 396 418 396 418 0.97 5 12 0.031 3.2 9.0 2.3 2 23 425 447 424 447 0.95 6 12 0.087 8.9 7.6 5.8 3 23 455 476 453 476 0.95 7 12 1.1e-06 0.00011 23.0 0.3 1 23 482 504 482 504 0.98 8 12 0.00012 0.012 16.6 0.8 1 23 510 533 510 533 0.95 9 12 9.1e-06 0.00093 20.1 1.3 1 23 538 560 538 560 0.97 10 12 0.001 0.11 13.7 1.0 1 20 571 590 571 592 0.94 11 12 0.015 1.6 10.0 0.3 2 23 623 644 622 644 0.96 12 12 0.0012 0.12 13.5 0.4 1 23 650 673 650 673 0.94
Sequence Information
- Coding Sequence
- ATGGCGATTGAAAACGTATGCATTCTCGATACATTGAGCGAAGATCAGCAAACTAACTCCATTGATGCTAAGGAAGCTAACGATCCTGATCAAATCGACCTTCACACGAGGAATGGTTTCCTTAACGATGTAAACAGTAAGTCATACGACGAATTGCCACTTCATACCTGCGATACAGACGACCAAACATGTACTCTTACTGCTGATAGCTTCGAAAATTTAGGTAACGTCATAATCTACGAGTCTGTCGTCGTTACCACCGAAgacaaattaatttcgaatgaATTGAAACCAGATACTACGAACGGATCTGCACATGAAGAGATAATCACCCAATCTTGCGATCTTTCCAATCACGAATGTTTGATCACAATTGGCGACGATTTTCACTCGAGTGATTTGATCGAATACGTAGAATATGACGAAACATACACTCATTCTGCCGATCACCTCGATTCCAACGACATACCAAATATCGTAGCCAACGATCTTGTCATCGAATACAATGAACTAATTCCGATTGGAACTGAACCAAATCCTACGAACGAATTCCTATGCAAGAGAAAAATAAGCGATGAAAATCCTCCCCAATCTTGCGATTTTTCCAATGTCGATCATATTGATGAAAACAATGTTTCTTTGATCTCTAACGACGACGAGTTTTATTCAAGCGACGAGATCGAATACATAGAAGAGATCTCAATCGAAGTCGAGCTAGATGAAAGACCGAAGTCGGTCAGTGACGAAAATGAGAGTATACCGTGCCGATTGTTTgaattaccaaaatatttaaaacctAATTCTAATCGTTGTAAGCTAATTTGCAATTATTGCCAGAAATGTTTTCggtcgaaaaatattttgcagaaGCATATTCGAAAGCACACAAAACAGTCGTTCAAATGTACCAAATGCGACAGATGCTTTGTCACTCGCAGTAGCTTAGTTCTCCATGAACAGGTCCACTCGTCTAAGAAGTCTCGGAAACGCAAACGAAAATATAATCGGGTATCGAGGAAATTCTTCTGCAGTCACTGTACTTTCAAATGCACCGCTCAGTCTGTAATGACTGCTCATACCAGGACAcacgatattgaaaaaaagttcttaccTAAAAGTACTTCAATCCGGAGCAAATGCATATCCGATCGTGTCCGCTCAAAGAGCTGCACATCTAACCAATCATTTAGTTGTGATAAATGCGGTAAAACGTTCACCACCAGTAACCGTCTAGGTGTGCACCGAAGTTCCCATACTTGTGAGAGGTTATTGAACTGTACCAAATGTCAATTCCGCGCTAAGAACTACAACAATCTCAAGTATCACATTTCGACTCGGCATAGCGCAAACGAGCCCATGTGTTGCGAATTTTGTGGTAAATTATGCGATAATAAGTTCAAATTGAGAGAACATCTCAGAAACAGCCATAAAGTAGGGAAACAATTCATCTGCGATATTTGCGACCGTAAATATAAATCGAAGGCTACCCTGATCGCTCATATTAGAAGTCACATGGCCGAAAAGCCATTTGTTTGTGAAATCTGCAACCAAAAGTACGCCGTCAGGAGTAGTTTAATTCGACATAAACGTTTCCAACATGGCGCCGATCAATTCGTCTGCGATTATTGTCAGCAAACTTTCgggcaaaaaaataccttgagGAAGCACATTCAGGAACATCTGAGACAATTGAACAGGACAGTGGAATTGTACAAGTGTCAATTATGCGAATTGGAATTTACAGAAAGATCTCAACTAAAGAATCATGCCTGTATCACCGAGCTTAGCTTCGAGCAAGAATCTATAGATACCAGTCAAACTTATCGTCATATTTTCAGTACCAACGTGAATGAATCGTTACATCTGACGTGCCAAATATGCGATTTCAAAGTAGATCGAGATTCTGATCTAATGGATCATTTTAGACTGCATACTGGAGAAACGCCTTTCTTTTGCGAAATCTGCGAAGAGAGATTTGCTCGCAGTATGGATTTATCGATGCATAAACTTATTTATCACGATTAG
- Protein Sequence
- MAIENVCILDTLSEDQQTNSIDAKEANDPDQIDLHTRNGFLNDVNSKSYDELPLHTCDTDDQTCTLTADSFENLGNVIIYESVVVTTEDKLISNELKPDTTNGSAHEEIITQSCDLSNHECLITIGDDFHSSDLIEYVEYDETYTHSADHLDSNDIPNIVANDLVIEYNELIPIGTEPNPTNEFLCKRKISDENPPQSCDFSNVDHIDENNVSLISNDDEFYSSDEIEYIEEISIEVELDERPKSVSDENESIPCRLFELPKYLKPNSNRCKLICNYCQKCFRSKNILQKHIRKHTKQSFKCTKCDRCFVTRSSLVLHEQVHSSKKSRKRKRKYNRVSRKFFCSHCTFKCTAQSVMTAHTRTHDIEKKFLPKSTSIRSKCISDRVRSKSCTSNQSFSCDKCGKTFTTSNRLGVHRSSHTCERLLNCTKCQFRAKNYNNLKYHISTRHSANEPMCCEFCGKLCDNKFKLREHLRNSHKVGKQFICDICDRKYKSKATLIAHIRSHMAEKPFVCEICNQKYAVRSSLIRHKRFQHGADQFVCDYCQQTFGQKNTLRKHIQEHLRQLNRTVELYKCQLCELEFTERSQLKNHACITELSFEQESIDTSQTYRHIFSTNVNESLHLTCQICDFKVDRDSDLMDHFRLHTGETPFFCEICEERFARSMDLSMHKLIYHD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -