Basic Information

Insect: Trionymus perrisii
Gene Symbol: -
Assembly: GCA_900050545.1
Location: FIZV01032764.1:3030-9319[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0059 0.6 11.3 0.4 2 23 151 172 150 172 0.96

2 16 5.8e-06 0.0006 20.7 4.9 1 23 405 428 405 428 0.97

3 16 0.33 34 5.8 0.1 1 23 446 469 446 469 0.93

4 16 5.5 5.7e+02 1.9 0.8 3 11 490 498 489 507 0.82

5 16 0.024 2.5 9.3 1.9 1 23 533 556 533 556 0.95

6 16 0.0075 0.76 10.9 1.2 1 21 574 594 574 595 0.95

7 16 0.0043 0.44 11.7 2.1 1 23 610 633 610 633 0.98

8 16 0.0011 0.11 13.6 2.7 1 23 648 671 648 671 0.98

9 16 2.7e-05 0.0028 18.6 1.3 1 23 679 702 679 702 0.93

10 16 0.051 5.2 8.3 1.5 1 23 728 750 728 750 0.97

11 16 9.3e-05 0.0095 16.9 1.8 1 23 756 779 756 779 0.97

12 16 0.0025 0.26 12.4 3.9 1 23 785 807 785 807 0.98

13 16 0.00085 0.087 13.9 0.2 1 23 813 835 813 835 0.96

14 16 2.4e-05 0.0024 18.8 5.2 1 23 841 863 841 863 0.98

15 16 0.00029 0.029 15.4 3.7 1 23 869 892 869 892 0.97

16 16 0.00093 0.095 13.8 3.4 1 23 898 920 898 920 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0059	0.6	11.3	0.4	2	23	151	172	150	172	0.96
2	16	5.8e-06	0.0006	20.7	4.9	1	23	405	428	405	428	0.97
3	16	0.33	34	5.8	0.1	1	23	446	469	446	469	0.93
4	16	5.5	5.7e+02	1.9	0.8	3	11	490	498	489	507	0.82
5	16	0.024	2.5	9.3	1.9	1	23	533	556	533	556	0.95
6	16	0.0075	0.76	10.9	1.2	1	21	574	594	574	595	0.95
7	16	0.0043	0.44	11.7	2.1	1	23	610	633	610	633	0.98
8	16	0.0011	0.11	13.6	2.7	1	23	648	671	648	671	0.98
9	16	2.7e-05	0.0028	18.6	1.3	1	23	679	702	679	702	0.93
10	16	0.051	5.2	8.3	1.5	1	23	728	750	728	750	0.97
11	16	9.3e-05	0.0095	16.9	1.8	1	23	756	779	756	779	0.97
12	16	0.0025	0.26	12.4	3.9	1	23	785	807	785	807	0.98
13	16	0.00085	0.087	13.9	0.2	1	23	813	835	813	835	0.96
14	16	2.4e-05	0.0024	18.8	5.2	1	23	841	863	841	863	0.98
15	16	0.00029	0.029	15.4	3.7	1	23	869	892	869	892	0.97
16	16	0.00093	0.095	13.8	3.4	1	23	898	920	898	920	0.97

Sequence Information

Coding Sequence: ATGGGCGAGGCGTGGCGAGGCACGGTGCGGTGCGGTCGGTGCGATACGGCTGGCATAGCGTATTTCGTATTAGCTGTTCCATTTGCAAAGTCTTACTGTCTTGTAGTCATAGAGCAGGAGCAGGAGCAGGAGCAGGAGCACGACGAAAAACGACGACTAAACATTTCTTTACTCGTGACACGATTGTCGACGGCTGCGGCTGCGGCTGCGGCTACGACTTCCACTACCGCTTTTTCGAAAACCAATTCCCTATGTCCGAGTGGTGCTGTGCTCGATGGCGAGAAATGGGATCCACTTATAGTACCGCCACCACAGACATCGTCACCTTCGCCTACAACGGCCGCCGCTGGTGCCACGGCGACGTACGCCGAAGATCGGGCGAAATTGgtgaagagtaaaaaattagggCCTCTAATGCGTAACTACAAAGGCGACGATATCGCCGTGCTGGAATGCGATCAATGTACGGCGTTTTTTATTGATgaaacagattttgaaaaacatcgcAACTCGCACGAAGATCATGCCATTCTGAAAGCTGGCGATGTCAGTTCTGGAATAGAAATCGGCTGTGTGATCAAATACAGCGACGTCGATGGCCTAACCAAAGTTGACTCGAGATCCGACCTAGATGTTACGCCCTTGAAACCacacagcaaaaaaaaattgtctacgAATTCGACTACCACCAGTACAAGAGGATGGAGGCAGTCCACTcgacaaaaattacgtatcaAGTTGGGTGGTAACGTCGTAGTTAAGAAAactgctaaaaaattattcgccaGTAAATCCGCATCGAAAAATAACTCAGTAGATGTTGATGACTCGAAATCTGCTGCTACGTCATCATCACAAAAAAGAAGATATATGAAATTGGACGAAAACGAAGCTGAAAAcgcgagtaaaaaatatacaagacCTTCCTTTATCAATGACCAACATGAAATCCACGTTACTAGAGGTAAAGACCCGAAAAAACGTAGATACTCCGAGATAGCAGAAGACAAAAATGCTGGCACAAACGATgagatgaaaattgtcaaaaaagaaGATTCAGATATCGAAGTGATCGAAGAAATGATCTTATCCGAACAAAAAGTAGCTCGAGAGCGAAGGAGTACCTCGGATGGTGAAACGAGACAGAAAAAAACTCGACTGAAGCGATTCCGTCGTGGAAACGACGAAGAGGAAGATAAAAGCCAAACTATCTACACTTGCGCCCATTGTCTGCGAAATTTCCGTCGAAAATCAAATCTAAAAAGGCACATGTCCAAGTTGCATTTTGATAAGGAAAAAGAAGAAGCTGGCGATTCTTCGAAATGGTTCACCGGCTACTGTTGCGATGTTTGCGGCGAAGGATTGCAAGTTCGATCGATGATGATGGCTCATCGTGACGTCGTGCATGGCAAAGTTCCAGAAATAGATTGGTGTAAATATCAAACCTCATTGGCTCGGGTTAAATTCTGCAACGAGTGCAAGAAATATTTCCGAGGTGGTAAATTATTCGACGAGCATAGTTGCGATAAAGGTAAAAGTATCGTTGATGAAAAACGTGTCAGATTATTGCAAGAGGCCGAGGATATACCACCATCATTCGTTTGTTACATTTGTAATCAGTGCTTTAGGTGGAAGTGGGATTACCGAGCTCATCGTGAAAGCGAGCATAAAGACGCAGTACCTGTCGATTGGTCTGGGTTGAAACCTCTGCCGTTGGAATTTTACTGTGACAAGTGTTTCAAGGCGTATTCTGACGCAGTAACATTGAGCGAACATCAGTGCAGCGCTGCACCGCAACAGTCAGCCGACAACGTAGTTGTGAAACCTTTTCGATGCGAGCTTTGTGGCAACGATTACTTCTGGAAGTCTGATTTCCGACGGCATATGCGAACCAAGCATCCAAAAGAAAACTATAAACCTACCGAGCATGATACCATAATTTACTCGTGTCCATATTGCGAAGAAAAGTTCTCCATGAAAAAACGAATCCTGCATCACATGCGTAAAGCCCACAGCATCAATAGTGATTCGCCGTTCGTTTGTGTAAAATGCAACAAGGTATTCAGAAGACGTGATAACCTCGATAGGCACAACGAATCGTACCATCCGACGTTGAACGATCAAGAAGAAGTTACTAAAATATTATCCGTAGCGGAAATCAAAATCAACGGCGAAATCGCCTATCATTGCGAGGTTTGCAATCGTAATATCTCGAATCCCAATCGATTCATATCGCATTATCGTGGCCATTATTCAGAGAACAAGTTTACTTGCGATTTATGCGGCAAACAGGCAAAAACGCAGCATCAGTTGAATACtcatatcaaaaatattcacctTAATATACGTAACTACAAATGCGACCTTTGTAATAAGAGCTTTTACACAAAACAAGCCTGCGAAGAGCATAGACGTATTCATACCGGTGAACGACCATTCTCGTGCGAAATCTGCGGCAAAACCTTTGTCGCTGGTAACGCTCTCATATCTCATAAACGATTCCATAATGATTTCTATCCTCACAGTTGTCACATGTGTCcgaaaaagttcaaagtacGCAGGTCATTGATCAATCACATACGAACCCATACTGGAGAACGTCCCTTCAAATGTGATCTGTGCACGAAAACATTCAACAATTCGTCGCAATACTCGTACCATAAAAAAGTCACTCATTCGGAGAATCGTCCGTTTACATGCTCCCTCTGCGGTAACTGTTTCAAAGCCAATAAGTTCTTAACCAGACATATGGAATTGCATACCGTTCGTAGCCAAATTCAAAGTCGGAAACCAAACAATCCAGCCCACTATACTACTTCGCAAATAAAAACATCGACAGCGACAGTTCAACCAGTTGCCAGTACAACGATGATAGTGAGTCATCAGCAGCAGTCACCGGTACTTCAGCAACACTCATCTGGCAGAGTGGACGCCATCGGGCAAACAGCTTCGGCTGCCCCCATCATGACTGCACAAGTACAATCGGTTCAACACGTTACCCCCACTACTGTCTATATCAAACAAGGGTCGCCATCAACGTCTTCGGCTTCTACTTACAGAAACGACAATGTAGTCGGTGCGACGATGTACAATTTGCAACGAGCAGGGTATGAATCTAGTGGCAACGAATTTGTTAGATCCGCTGCCGTTCCCGAGTGCGATATCAATGCTATGAACACTGCAAAAAGGAATTTTACCGCGGCCGACGCTTATATAGCTGCTGCTAATTACGCCTTAAGTAACGAAGATTATAAGCCAACTCCTAATGCAGTGAATAGACCTTATAATCCGCCTGACCAATCTGCGGGTAATCACCCTATCGCCACTGGGAAACATATGACGTGGTTGTAG
Protein Sequence: MGEAWRGTVRCGRCDTAGIAYFVLAVPFAKSYCLVVIEQEQEQEQEHDEKRRLNISLLVTRLSTAAAAAAATTSTTAFSKTNSLCPSGAVLDGEKWDPLIVPPPQTSSPSPTTAAAGATATYAEDRAKLVKSKKLGPLMRNYKGDDIAVLECDQCTAFFIDETDFEKHRNSHEDHAILKAGDVSSGIEIGCVIKYSDVDGLTKVDSRSDLDVTPLKPHSKKKLSTNSTTTSTRGWRQSTRQKLRIKLGGNVVVKKTAKKLFASKSASKNNSVDVDDSKSAATSSSQKRRYMKLDENEAENASKKYTRPSFINDQHEIHVTRGKDPKKRRYSEIAEDKNAGTNDEMKIVKKEDSDIEVIEEMILSEQKVARERRSTSDGETRQKKTRLKRFRRGNDEEEDKSQTIYTCAHCLRNFRRKSNLKRHMSKLHFDKEKEEAGDSSKWFTGYCCDVCGEGLQVRSMMMAHRDVVHGKVPEIDWCKYQTSLARVKFCNECKKYFRGGKLFDEHSCDKGKSIVDEKRVRLLQEAEDIPPSFVCYICNQCFRWKWDYRAHRESEHKDAVPVDWSGLKPLPLEFYCDKCFKAYSDAVTLSEHQCSAAPQQSADNVVVKPFRCELCGNDYFWKSDFRRHMRTKHPKENYKPTEHDTIIYSCPYCEEKFSMKKRILHHMRKAHSINSDSPFVCVKCNKVFRRRDNLDRHNESYHPTLNDQEEVTKILSVAEIKINGEIAYHCEVCNRNISNPNRFISHYRGHYSENKFTCDLCGKQAKTQHQLNTHIKNIHLNIRNYKCDLCNKSFYTKQACEEHRRIHTGERPFSCEICGKTFVAGNALISHKRFHNDFYPHSCHMCPKKFKVRRSLINHIRTHTGERPFKCDLCTKTFNNSSQYSYHKKVTHSENRPFTCSLCGNCFKANKFLTRHMELHTVRSQIQSRKPNNPAHYTTSQIKTSTATVQPVASTTMIVSHQQQSPVLQQHSSGRVDAIGQTASAAPIMTAQVQSVQHVTPTTVYIKQGSPSTSSASTYRNDNVVGATMYNLQRAGYESSGNEFVRSAAVPECDINAMNTAKRNFTAADAYIAAANYALSNEDYKPTPNAVNRPYNPPDQSAGNHPIATGKHMTWL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00194630;
90% Identity: -
80% Identity: -