Basic Information

Insect: Trionymus perrisii
Gene Symbol: -
Assembly: GCA_900050545.1
Location: FIZV01055055.1:342-3485[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 7.6e-05 0.0078 17.2 0.7 2 23 72 94 71 94 0.95

2 22 0.00011 0.011 16.8 2.3 1 20 378 397 378 402 0.92

3 22 0.39 40 5.5 3.4 2 23 413 435 412 435 0.95

4 22 0.0013 0.14 13.3 2.6 2 23 440 462 439 462 0.97

5 22 6.1e-05 0.0063 17.5 5.1 1 23 479 501 479 501 0.98

6 22 0.0064 0.66 11.2 2.0 1 23 505 528 505 528 0.87

7 22 0.026 2.7 9.2 5.0 2 23 540 562 539 562 0.96

8 22 0.0061 0.62 11.2 1.9 2 23 567 589 566 589 0.96

9 22 9.4e-07 9.6e-05 23.2 3.2 1 23 593 615 593 615 0.97

10 22 0.0059 0.6 11.3 3.8 1 23 619 641 619 641 0.97

11 22 3.5 3.6e+02 2.6 0.4 2 23 648 670 647 670 0.89

12 22 0.00055 0.057 14.5 0.8 3 23 678 699 677 699 0.96

13 22 9.8e-05 0.01 16.9 3.6 3 23 724 745 722 745 0.95

14 22 0.003 0.3 12.2 1.2 1 23 751 773 751 773 0.98

15 22 0.00055 0.056 14.5 3.9 1 23 779 801 779 801 0.98

16 22 1.5 1.5e+02 3.7 0.2 1 23 807 830 807 830 0.87

17 22 2.8e-05 0.0028 18.6 4.1 1 23 834 856 834 856 0.99

18 22 0.00018 0.018 16.1 4.8 2 23 869 890 868 890 0.96

19 22 0.04 4.1 8.7 0.5 2 23 895 916 894 916 0.93

20 22 0.004 0.41 11.8 0.1 3 23 924 944 922 944 0.97

21 22 2.6e-05 0.0027 18.7 1.4 1 23 950 972 950 972 0.99

22 22 0.0021 0.21 12.7 1.2 1 23 978 1001 978 1001 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	7.6e-05	0.0078	17.2	0.7	2	23	72	94	71	94	0.95
2	22	0.00011	0.011	16.8	2.3	1	20	378	397	378	402	0.92
3	22	0.39	40	5.5	3.4	2	23	413	435	412	435	0.95
4	22	0.0013	0.14	13.3	2.6	2	23	440	462	439	462	0.97
5	22	6.1e-05	0.0063	17.5	5.1	1	23	479	501	479	501	0.98
6	22	0.0064	0.66	11.2	2.0	1	23	505	528	505	528	0.87
7	22	0.026	2.7	9.2	5.0	2	23	540	562	539	562	0.96
8	22	0.0061	0.62	11.2	1.9	2	23	567	589	566	589	0.96
9	22	9.4e-07	9.6e-05	23.2	3.2	1	23	593	615	593	615	0.97
10	22	0.0059	0.6	11.3	3.8	1	23	619	641	619	641	0.97
11	22	3.5	3.6e+02	2.6	0.4	2	23	648	670	647	670	0.89
12	22	0.00055	0.057	14.5	0.8	3	23	678	699	677	699	0.96
13	22	9.8e-05	0.01	16.9	3.6	3	23	724	745	722	745	0.95
14	22	0.003	0.3	12.2	1.2	1	23	751	773	751	773	0.98
15	22	0.00055	0.056	14.5	3.9	1	23	779	801	779	801	0.98
16	22	1.5	1.5e+02	3.7	0.2	1	23	807	830	807	830	0.87
17	22	2.8e-05	0.0028	18.6	4.1	1	23	834	856	834	856	0.99
18	22	0.00018	0.018	16.1	4.8	2	23	869	890	868	890	0.96
19	22	0.04	4.1	8.7	0.5	2	23	895	916	894	916	0.93
20	22	0.004	0.41	11.8	0.1	3	23	924	944	922	944	0.97
21	22	2.6e-05	0.0027	18.7	1.4	1	23	950	972	950	972	0.99
22	22	0.0021	0.21	12.7	1.2	1	23	978	1001	978	1001	0.96

Sequence Information

Coding Sequence: TTGCAGAACATCGAATCAGTACCAACAGTTGAAAATTGCTCCAGTCCAAACTCGCCACCTTCGGTTTTTCAAATCGACACctcaaaaaatgtccaaacTAGTCCAGATCAAGGTTTAGATACCATCTCCGAAGACACGACCGTGGAACCGGACTCGACAAATCATTCAACCAAGAATGAATCAAACCAATCATCTGAAAAATCGTCACTCCTCACGTGCGAAATTTGCGATCAAACTTTTGCAAGCTTTAGTAATCTTCTCAGTCATAAAACCACAACTCACATTCTAGACGATGGTATCGATTCTGCCGACGTAGTTGATATCGATACCGTCAAAGATCCGACAGTAGTGTCCCTAGTGTCGAATGAGAGCGAATCTGTCTCGTTGAATGAATCAGTTAGCGACGAGTTAAGTTCGCTTGATCAATGTGAAGTTCCTATTTACCAGATTGAcgataaaatacctactactTATAGTCATCTTCGAGATGAAACTGATACAAATCAGGAGACTGGTCTCAGTTTCGTTGACGACGGTCTTCAACCTAACGATGTTGAAATTGCCACGAAGAACGTGGACGATAACGTTCAAAACGTTGCAGTGGTATTTACGAATGAAAAGGTAACAGAATCGACGAACCAATCATTTAAAGATAGTGTTACCGTAGAacgttttgataaattgtccTTTCAAGGCTGCGAGAATGAAGTCGAAGTTTCCTCTCTGTCTAGTGATAATGATACAGGCTACGAAAACATATTATCTCGTACAATAGTCGACGAACATTGCTCAAACAATGTTATCGATAGTAGAAAAGACGTTGAACAAATCTCGAACAACGTTATCGATAGTAGAAGAGATATTGAACAAATCTCGAACAACGTAGAATTAAATACGATAAGTGAATCTGTAAACGAGACAGGATGTGATCATCTCATTGACATTCGAAATGATGGAAACAGTATTCATTCTAACGATGATCAAAGTAACTCAGATGACGATTGCGTGATAATCGAAGACGACTTTGAAGAAATCTCGATAGATATCGACCTAGACACGACGACCGATTTAGTAAATCAAACTCATCACAGGCATCGATTTGGTAAAAACAGTACCCTAAACAAAACATCatacaattgtaaaaaatgcgATAAAACATTCACGAGTCAAAGGGGTTTACGTATTCATGAAGCGCATCGATCGCATGAACTTACAGGTAGCCCAAATCTGAAGCTAAAATGTGACAAATGCGAGTTTCGTGCTAGATATAAACATAATCTTCTTTATCATACGTTATCTCGACATACCGGTTCGGTCACTTGTCCAACATGTGGTAAATTATGCAGCAATAAGATCAACTACCTCAGTCATCGTAGGCGTAATCACGCTAACGTAGTACTGCCGAATCCCAAGCTACCCAAGCATAAGAATGAGTACATTTGCGCCCTTTGTCAGAAACATTTCCCGCACAAATCAACTCTCAAATCGCATCTCCGCCGTCACGATTATAAATACAAATGTAAACAATGCGATAAAACATTCGccgttgaaaaaagtttgcgTTTTCATGTATTTAAATTGCATAGAATTGAACCTGAACAATCGACACCAACGTTAGAATGCGACAAATGCGACTTCCACGCTAAATACAAACATAATCTCAACTATCACATGTCAACCAAGCACACCGGTCCGATCGTTTGTCCAACATGTGGCGAATCATGCGGTAATAGAATAGCTTTCCTACATCATCGTAGACGTTATCATTCGTTCAACTACTTTTGCAAACACTGCGAAAAGTCTTTCCGCAACAAAGGAACGCTAAGAGCACATATCCGCGGTCATATTTCGGTTCATAAATGTGAAGAATGCGATAAAAGGTTCCTTACGAAGATTGGATTACGTTCGCACAAACGATTTCATACTTCGCCGGCTGAAATAAAATGTGACAAATGCGATTTCACTGCCAAAATTCGTCGAGTCGTCAATGACCATATGCTGAGCCAGCACGGTACAGAAGGATCTTTACTTTGCGATTCGTGCGGCGAATCGTTCAAAAGTCGAACGTCTCTTTCGACTCATTATAAACTGGTCCATAATCCGAGTGGAAGGCTAAAGAATCATCTTATACAACATATTCAAGTAAAACACTTGGTCGAAGAGtcaatttgccaaatttgcaataaaacgTTCAGAAATAAAGCCTGTCTGaaattgcatttgaaaaatactcacaACGCGGTGAATAAATACACGTGCGAAATATGTGATTATAAATGCTCAGCACCGGGTCGTTTAAAGGACCATTTCAGGATACACCTTGGAGAAAAACAACACGTTTGTGACGTTTGTAAAGAGTCTTTCGTGCATAAGAGAAGTCTCGTATTACACAAAAAAACTCACGAACAAGTTGGCCAATTTGTCTGCGACCACTGCCAAGCGGAATTCTGGTTAGAGATGAGCTTAAAAGAGCATATTATCGAAACACACACATTCCACTTCAAGTGCAACAAATGCCAGAAACGTTTTTCCACCGAGGCTGAACTTTGCTCGCACGAAAATACTCATGCTTCGGATGGCAAGGTAGTTCCGCAAAAGAAATGCATTTGTGAGGTTTGTGGCAAAGCCTGCAGCTCTGAATTCCATTTAACTTCGCATCAACGTATTCACAATAATGTGTTGACTTGTAacccttgtcaaaaattgttcagttcGAGAAGAGCCTTGAGCCAGCATCTTCTCGGTCATACATCTACTGAAAAGACAGCTTGCGAAACATgcggcaaaattttcattggtgAGGTTGCTATGAAATTGCACCAAAAACGGCACCAAAAAGAATTAATGTTCACGTGCGAAATATGTGATTATAAATTTAGGTCGTTGAGTGTCTTAACTGACCATTTTAGAACGCATACCGGAGAAACATCGCACTCGTGTGATGAATGCGACCTTaattattccgaaaaaagAGACTTACTATGGCATAAGCGTATCTATCATCCCATTAAGCGGATTACAAGAGAATTTAATTTGACGAATGCTCATAAGGGACCTATTGAACCCATTGTTATAGATTAA
Protein Sequence: LQNIESVPTVENCSSPNSPPSVFQIDTSKNVQTSPDQGLDTISEDTTVEPDSTNHSTKNESNQSSEKSSLLTCEICDQTFASFSNLLSHKTTTHILDDGIDSADVVDIDTVKDPTVVSLVSNESESVSLNESVSDELSSLDQCEVPIYQIDDKIPTTYSHLRDETDTNQETGLSFVDDGLQPNDVEIATKNVDDNVQNVAVVFTNEKVTESTNQSFKDSVTVERFDKLSFQGCENEVEVSSLSSDNDTGYENILSRTIVDEHCSNNVIDSRKDVEQISNNVIDSRRDIEQISNNVELNTISESVNETGCDHLIDIRNDGNSIHSNDDQSNSDDDCVIIEDDFEEISIDIDLDTTTDLVNQTHHRHRFGKNSTLNKTSYNCKKCDKTFTSQRGLRIHEAHRSHELTGSPNLKLKCDKCEFRARYKHNLLYHTLSRHTGSVTCPTCGKLCSNKINYLSHRRRNHANVVLPNPKLPKHKNEYICALCQKHFPHKSTLKSHLRRHDYKYKCKQCDKTFAVEKSLRFHVFKLHRIEPEQSTPTLECDKCDFHAKYKHNLNYHMSTKHTGPIVCPTCGESCGNRIAFLHHRRRYHSFNYFCKHCEKSFRNKGTLRAHIRGHISVHKCEECDKRFLTKIGLRSHKRFHTSPAEIKCDKCDFTAKIRRVVNDHMLSQHGTEGSLLCDSCGESFKSRTSLSTHYKLVHNPSGRLKNHLIQHIQVKHLVEESICQICNKTFRNKACLKLHLKNTHNAVNKYTCEICDYKCSAPGRLKDHFRIHLGEKQHVCDVCKESFVHKRSLVLHKKTHEQVGQFVCDHCQAEFWLEMSLKEHIIETHTFHFKCNKCQKRFSTEAELCSHENTHASDGKVVPQKKCICEVCGKACSSEFHLTSHQRIHNNVLTCNPCQKLFSSRRALSQHLLGHTSTEKTACETCGKIFIGEVAMKLHQKRHQKELMFTCEICDYKFRSLSVLTDHFRTHTGETSHSCDECDLNYSEKRDLLWHKRIYHPIKRITREFNLTNAHKGPIEPIVID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -