Tper000460.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Trionymus perrisii
Gene Symbol
-
Assembly
GCA_900050545.1
Location
FIZV01051956.1:3069-7630[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 36 7.1e-07 7.2e-05 23.6 0.7 1 23 145 167 145 167 0.98
2 36 5.5e-05 0.0056 17.7 2.6 1 23 203 225 203 225 0.97
3 36 2.3e-05 0.0023 18.9 1.5 1 23 241 263 241 263 0.98
4 36 0.0031 0.31 12.2 0.7 1 23 268 290 268 290 0.97
5 36 0.0011 0.11 13.6 2.1 1 20 296 315 296 318 0.92
6 36 0.55 56 5.1 9.3 1 23 323 345 323 345 0.93
7 36 9e-06 0.00092 20.1 2.2 1 23 351 373 351 373 0.98
8 36 2.8e-05 0.0029 18.6 2.8 1 23 377 399 377 399 0.99
9 36 0.016 1.7 9.9 0.4 1 23 513 535 513 535 0.97
10 36 5.2e-05 0.0053 17.7 4.8 2 23 542 563 541 563 0.96
11 36 0.011 1.2 10.4 2.0 1 23 566 588 566 588 0.97
12 36 1.8e-05 0.0019 19.2 3.9 1 23 593 615 593 615 0.99
13 36 2e-07 2e-05 25.4 1.0 1 23 619 641 619 641 0.99
14 36 1.9e-06 0.00019 22.3 1.8 1 23 645 667 645 667 0.99
15 36 5.3e-06 0.00054 20.9 1.8 1 23 671 694 671 694 0.97
16 36 2.4e-05 0.0024 18.8 3.4 1 23 699 721 699 721 0.98
17 36 0.0051 0.52 11.5 6.1 1 23 725 747 725 747 0.99
18 36 4.4e-06 0.00045 21.1 3.7 1 23 754 776 754 776 0.98
19 36 0.0031 0.31 12.2 2.1 1 23 780 803 780 803 0.98
20 36 0.0013 0.13 13.4 6.3 1 23 851 873 851 873 0.97
21 36 0.02 2.1 9.6 2.1 1 23 877 900 877 900 0.96
22 36 0.00011 0.012 16.7 2.6 1 23 906 928 906 928 0.96
23 36 0.002 0.21 12.7 1.7 5 23 935 953 934 953 0.97
24 36 2.8e-05 0.0029 18.6 1.6 2 23 959 980 958 980 0.97
25 36 0.0001 0.01 16.8 0.6 1 23 986 1009 986 1009 0.95
26 36 0.00031 0.032 15.3 1.2 2 23 1018 1039 1017 1039 0.92
27 36 0.049 5 8.4 3.7 1 23 1043 1065 1043 1065 0.91
28 36 1e-06 0.00011 23.1 2.2 2 23 1072 1093 1072 1093 0.97
29 36 1.7e-06 0.00017 22.4 1.3 2 23 1108 1129 1107 1129 0.96
30 36 0.00024 0.024 15.6 0.9 1 21 1135 1155 1135 1158 0.90
31 36 0.015 1.5 10.0 2.1 1 22 1164 1185 1164 1185 0.95
32 36 0.005 0.51 11.5 3.1 1 23 1192 1214 1192 1214 0.97
33 36 5.4e-05 0.0055 17.7 2.2 1 23 1220 1242 1220 1242 0.99
34 36 0.052 5.3 8.3 1.3 2 23 1249 1270 1248 1270 0.95
35 36 0.0073 0.75 11.0 6.2 1 23 1274 1297 1274 1297 0.97
36 36 0.0023 0.23 12.6 0.2 1 23 1303 1325 1303 1325 0.98

Sequence Information

Coding Sequence
ATGTACTCCGGCCAGAATAtagtgcaaaattttAATGGAAACAACCAATACCAATACTCGTGCAATGAAGGGATACCAAACGTCAAAGTGGAAAGAGAAGATGACTATGAGCACCCGGTAAATGACGAAGATGATTCTCATTACCAAGATGACCACGACAACGTTGCCCATAACGTTAAACCCGACAATGAATCAAACATTTCTGATGaagaaatcgatttatcgGCTGCTGATAAATTACAGaatttcttcaaaaatgaaggaataCGGTTACCACGTGGAACGGAGATTCTTATAGCGCCTACCCAATCTTCGAGTGGTGCGTGCGATAACGATTCCAACGAATCAGATTCGAGCGACGAAGCTATGGTGGAATTTCCGCCATTCGAACCAAACGTAGATAACAAATCGGTACCaaagttggagaaaaattacccTTGTTCCTTGTGCGATAAAGCTTTCAGTACGAAGCGTTATCTAGAAACGCATATTCGCCTCCATACCCTGGAATCGCTTCCAGAACACCAGCTGAGCTTGGAACGTGAACTCGACCTATCTCGAGGATCGTTGAACGTGTTACCAGCTATCGATACTACGCCCGGAGCGTTCGCCTGTCCCGTTTGCGACAAGACCTTCCACATGAAACGTTACCTCTCGAATCACCTGAGATCGCATAATATGAAACTGGTCGAATCTGATCCGAACTTCAACGGCGAATCTTACACTTGCCAACAATGTCAGAAATCGTACACGAAGAAGGCTTCTTTCATAGCGCACATGAAAGCCCACGATGACCGACCTTACAAATGCGAAATCTGCAGTCGTCTATTTCGCGAGTTGAACTCTCTCAACGTGCACCGATCTTTACATTCCTCCAATTCAAAGCACCAGTGCACCGTTTGCGGTCTATTCTTCAAGTTTCGATCTCAGCTTAAGATACACGAATGGACCCACAGCAATAGCAAATTCACTTGTAAATTCTGCGGTAAAACATTTCGTAATTATTTCTCCTGCAAGAGTCACGAGAATCACCATGTTAACGGTAAACAGTTCACATGTTCCTTTTGcgacaaaactttcaaatacaAGGTGGCTCTGAAGACGCACGTACTAACCCATACCAGACCTTACAAATGCGATTCGTGCAATCGTACGTTTGATAACTCGGTCAAACTGCAGAATCACAGGAAGACCCATTTATATGAGAAATTCCAAATGAATATTTCCCAAAGTAGTCACGATCCTTTGGCTTCGAACGACGACGTTTACGTTAAATTCGAGCCTAATGATGACTACCAGGGAAACTGTACCGAATCGCAGCAGCGTACCGAATACGAAGAGACCATCGTTCATCAGCAGATCGAATTCTTACCCGATTGTGGTCCTTATGACGAGTCCGCCAAGTCAGAGACTATCGTCGATGATTGCCTCGTAGACAATTTACAGTTACATTTCTTGGAAGGTGGCGAGAACGATTGCGATGAAAGTAACGAAGGCAATTCCGAGCACTGCGATGAGAATTCCGACCTGCCATTGTACTCGTGCCAATATTGCAAGATCGAGTTCAAGTTACTAGAGGAATACCAAGGTCATATGGGCTCTCATCAGGGTAACTTGGACTTAAACTGTAAACATTGCGGACAGGCTTTTAaacggtttaaaaaattggaaaaacatttGCGTAAACATAACGAGTTCAAGTGCGAAAGATGTATAAAAAGTTTCGAAACTGAAAGCGACCTTTTGCAGCATACGATTCACCATAAAGACGAATCTTTCAAGTGTAACTATTGCGATAGTATGTTTACCAATAAGTACACCTTACAGTACCATATTAAACGTCATTTGAAACGTTACCGTTGCAAGTACTGTCCTAAGAGTTTCGATAACGAGAGTCAGCTCGAGACGCACATCAACAGTCATCAATCAGTCTACAAGTGCGACTACTGCGATAAAGATTTCAAGTTCAACTCGTTACTAATGAATCATCTGAAAATACACACTAGACAGTTTAAATGCGACAAATGTGACAGGTCTTTTGACAAAAGTATCACGTTGACTAGACACCAGAGAAATGCGCATGCGCCCACTCCGTTCATCTGTCACATCTGCGAGAAATCCTTCAACTACGAGTCGACCTTTAATTCCCATTTACGCAGCCACAATCGTCAATTCCAATGCGTCTATTGTCTGCGTAGCTTCGACGACGAGCACTGCTATAATAAGCACATACGCAGACACGAGATGAAGTTCACCGAATTCAAGTGCGAAAAATGCgacaaaaagtttaaatattaTTCGCAGCTGCAGGTACATTTGAAGAATCATGGCAACGTGTATCGCTGCGACGAGTGCCAGATCGAACTAAAACACTGGAAGAGTTACGAGAAGCATAAACGAATCATGCATAGCACAGAAGGCCAGTCTATTTCTTCGGAGCAAGCTTCTGAAGAACCCACAACTGGCGAGAATTCTACACCTGGGGAGAACTCTGCAACCGGAGAAAGCTCGACAGCAATCGCGAGTTCTGCCCCGAGGCCGAAGACCTCGCACAAGTGTCCGAAATGCAGCAAACAGTTCAAATACCACTCGCAGCTGTTACTTCACGTCAAAAACCACAAAAACGCGCACCGTTGCGAGCCCTGCGACTTGCAATTCAAGAACTACCGATCTTACCAGAAGCACGTACGAGTTGTGCACGAACAAAGTCAAGAATTCGCTTGCACTCAGTGCGACGCTAAATTCAAATACCAGAGTCAGCTAAAACACCACGTCGAATCCCATAACCGAAAATACGCCTGCGAATGCGGCAAAACCTTCAATTCGAAGAAGTACTTCGTCAGTCATCAACAGTCGCACACCGTCGATAGTCTAAAATGCGACTACTgcgaaaaagaattcaaatacTTATCTACCCTCAAGCTACACTTGAAATCGCACCAGAAAGAATCCACCTTCCAGTGCGCATACTGCgatcgtattttcaaaaacaagtgGAAAATACAACGCCACATTGAGAATGTGCATctgaacgagaaaaaaatcaccctggTATGCCAGACATGCAACAAATCCTTCAAATACCTATCGCAGCTCAAACTTCACTCTGCCCAGCATGAGAAAACGTACTTGTGTAAAATCTGCGACCGTTCATTCAACAACAAACGGTACTACCTGTTTCACAAGAATAAGCACGCCAACGTCTCGGCTCCCACTTGCACTCAATGTGGCAAATCCTTCAAATACAACTCCCAACTTCGTATCCATTTGAAATCGCACGCCAAAGGTCAAAACGCAGCGTGCAGAACGCAATGCTCTTGGAACTGCAACCTGTGCGGCAAACGGTTTAAATTCCGGTCACTCCTCAAGAACCATATGATGATCCACGAAGGAGTAAAACCCTACCAGTGCAACTACTGCGGTAAACGATTCGCCTGGAAAAGCAGCCTCCAAATACACTCGTCCTTTGTACACAAACACAAGACTCGTTTCTACTGCGAATCCTGCGACCGATACTTCTTCTACGAAAGTCAATACAAACAACACATGTCCACTTGCCTCTGGAACGTCTCGTTCAACTGCAAGTACTGCGACAAGCAGCTAAAATCGCGTAAAACCTACGAATTACACCTTCTAAAACACGAAGGCACCAAACAATTCACATGTGCCCATTGCGACAAAGCCTTCTATACCAAACAAGTGCTCCTCAACCATGTCAGAACGCACCTCGAAAGGGAAACCAAATCTTGCCCGATTTGTAACCAACAATTCACCAGCGACTTCCGTTTCAACAGCCACGTCCAAAATCATTATAACGAATTCAGATGCGACATTTGcgataaagttttcaaatgcaAGTATAAAATGAAACGGCATTTTATGACCACCCATCAACCCAACTCTACCTACTCGTGTCAACTTTGCGGTAAACTATTTCTACGCGAAAGTGCCCTTATTAATCATCAAGCCAGCCATTTTGCAGCCCCAGATGACCCAGATGCGGCTGCCCAAGAAGATAAGAACATCGATAAACCGTACGAACAGCTCGAAGTGTACGATGAAGTACCAGACAAGTATCTTCCTAATGACGAACCGATCGATTGTAAACCCGACCTTTCCGAGTTGGATATTCTAGTTCCAGAAGTGATCTacgaaaaccatttttaa
Protein Sequence
MYSGQNIVQNFNGNNQYQYSCNEGIPNVKVEREDDYEHPVNDEDDSHYQDDHDNVAHNVKPDNESNISDEEIDLSAADKLQNFFKNEGIRLPRGTEILIAPTQSSSGACDNDSNESDSSDEAMVEFPPFEPNVDNKSVPKLEKNYPCSLCDKAFSTKRYLETHIRLHTLESLPEHQLSLERELDLSRGSLNVLPAIDTTPGAFACPVCDKTFHMKRYLSNHLRSHNMKLVESDPNFNGESYTCQQCQKSYTKKASFIAHMKAHDDRPYKCEICSRLFRELNSLNVHRSLHSSNSKHQCTVCGLFFKFRSQLKIHEWTHSNSKFTCKFCGKTFRNYFSCKSHENHHVNGKQFTCSFCDKTFKYKVALKTHVLTHTRPYKCDSCNRTFDNSVKLQNHRKTHLYEKFQMNISQSSHDPLASNDDVYVKFEPNDDYQGNCTESQQRTEYEETIVHQQIEFLPDCGPYDESAKSETIVDDCLVDNLQLHFLEGGENDCDESNEGNSEHCDENSDLPLYSCQYCKIEFKLLEEYQGHMGSHQGNLDLNCKHCGQAFKRFKKLEKHLRKHNEFKCERCIKSFETESDLLQHTIHHKDESFKCNYCDSMFTNKYTLQYHIKRHLKRYRCKYCPKSFDNESQLETHINSHQSVYKCDYCDKDFKFNSLLMNHLKIHTRQFKCDKCDRSFDKSITLTRHQRNAHAPTPFICHICEKSFNYESTFNSHLRSHNRQFQCVYCLRSFDDEHCYNKHIRRHEMKFTEFKCEKCDKKFKYYSQLQVHLKNHGNVYRCDECQIELKHWKSYEKHKRIMHSTEGQSISSEQASEEPTTGENSTPGENSATGESSTAIASSAPRPKTSHKCPKCSKQFKYHSQLLLHVKNHKNAHRCEPCDLQFKNYRSYQKHVRVVHEQSQEFACTQCDAKFKYQSQLKHHVESHNRKYACECGKTFNSKKYFVSHQQSHTVDSLKCDYCEKEFKYLSTLKLHLKSHQKESTFQCAYCDRIFKNKWKIQRHIENVHLNEKKITLVCQTCNKSFKYLSQLKLHSAQHEKTYLCKICDRSFNNKRYYLFHKNKHANVSAPTCTQCGKSFKYNSQLRIHLKSHAKGQNAACRTQCSWNCNLCGKRFKFRSLLKNHMMIHEGVKPYQCNYCGKRFAWKSSLQIHSSFVHKHKTRFYCESCDRYFFYESQYKQHMSTCLWNVSFNCKYCDKQLKSRKTYELHLLKHEGTKQFTCAHCDKAFYTKQVLLNHVRTHLERETKSCPICNQQFTSDFRFNSHVQNHYNEFRCDICDKVFKCKYKMKRHFMTTHQPNSTYSCQLCGKLFLRESALINHQASHFAAPDDPDAAAQEDKNIDKPYEQLEVYDEVPDKYLPNDEPIDCKPDLSELDILVPEVIYENHF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00194591;
90% Identity
iTF_00194591;
80% Identity
-