Tper006813.1
Basic Information
- Insect
- Trionymus perrisii
- Gene Symbol
- CAMTA1
- Assembly
- GCA_900050545.1
- Location
- FIZV01029838.1:54-4329[+]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-15 7.2e-11 42.4 0.3 77 116 4 42 2 42 0.94 2 2 0.42 1.2e+04 -3.4 0.0 67 83 89 105 78 120 0.74
Sequence Information
- Coding Sequence
- atgttttccaaaaataagTGTATTTATGGTTGCTACGTCCATTCCGCCGTATTGCCAACCTTCCACCGTCGATGTTATTGGTTATTACAGaatccGGATATAGTTTTGGTGCACTATTTGAATGTTCCATATCCAGATGATAGCAAATTGGCAGCTCTCATCCCAAACATAGCGTTTTGGACGGAAAAAAAGGAATGGACACGAGAAGAATTACTTTTACAATTAAAACCAATGTACGAAAATCCCAGTCTAGAAAGTAGTAAAGAAAACGATAGAgaggaattgaaaatgaatcgtGTAGATCAAGTTTCATCCTTCATCGAATCCATGATCGCTCAACTCCTCGAAAAACAACGTTACGTTCGTACAGCTCTGGCAAATTCTTTAGAATGCGGATGTGGAAGTCGCAAATGTATGGGAGCGACCAGATGTACTCGTCCAATACGACGCATATCGTCGGCCAAAAAGCAAGGTAAACGATCCAACGTGAACACCAAACTGCAAGAAAAACGTAGCGTTAATAATGGCGAGTTGATGCAGGCGGttaattctaaagaaattttgaccaattacTCCAGAACTGATATGAGAGTAGAAGGTTATTTACCAAATGTTGAATTCGTTAGCGGAGAAAATCAACATTATCAATCGAACTATTCTTGTCAACTAGTGGACCAATATGTGCCTAATAACGAAATGATGGACGAAAAACAGGAAATTACTTCGCAAGAAAACATCTCCTCCAATTCGAACTTAAACTTGATTCCGTACCAAAACGAAGACAACGAATACGTTACTGATAAGTACCAAAGTGATACTACCGATGGATCGGAATGCAACAGTTACTCCACGATTCATCATCAAGCCAGTCCAGATGAAAGCTTTACTAGTTTAGATGAAACAGAAGTCTATGCCAATGGCGATGTTCTCGACGATTTGGTTATGAACGTTAACCAATGCTATAATTACGAAAATGGAGATTACAACGCTGACAGAAGTCTGTACGAATTGATAATACAGCTAACgcagaaagaaaagaaatcaaacgCAACGAATTCTCTGCTGTCATATGAAAAACTACAGCAATATGGTTTACACAGCGAAAGTGCGGATACCTGTGAACCAATTTATGAAAGTAATTCTCAATCAATTTCCGATGCCAATGGAAACTTCTTGAATTCTTATTCGAGGTACAGTACCACAGCAGAAGTTGAAAATGCAAACATGAGTAACGCTTTATCAACGGAATTTACCAGAATTGAAGATGAACacatggaaaattattcaaCTGAAATGGGAACGAATTTCATAAATACATCGTCTGGTTTTCCAACGAGCGAACGATCAACGTCCAATCAATCCGAACATCAAGACTCGAGACAAAATGACTCTCCTTGTGTTATCTTAGATCTAGCTCCGGAGTGGTCATATTGCGatggAGGTACTAAATTATTAATCATCGGTCCGTGGTATTTCCAATCTGATTATTCGGTTCTTTTTGATTCTTACTCAGTACCGGCAACACTGATTCAAGCAGGTGTCTTACGTTGTTATTGTCCAGAACATGCAGTTGGACTGGTTTCCATTCAAGTAATGTCCAGCGGATCAATAATCTCCAATTCGGTTGTATTCGAATACAAGAAGAGGCCCGATTATGAAGAAAACGTTTGCCATAATTTATGTAATATAAAGTCAGAGCACTATAATCAATACATGTACGAAAATGACACCTTGTTGAAGTTCATATTAATACAAAGGATCGAAGCTATACAAGATGACGCGTTTATGCATAGCTCCTCTTTAATTAACAAATACGAagttagttttcaaaattag
- Protein Sequence
- MFSKNKCIYGCYVHSAVLPTFHRRCYWLLQNPDIVLVHYLNVPYPDDSKLAALIPNIAFWTEKKEWTREELLLQLKPMYENPSLESSKENDREELKMNRVDQVSSFIESMIAQLLEKQRYVRTALANSLECGCGSRKCMGATRCTRPIRRISSAKKQGKRSNVNTKLQEKRSVNNGELMQAVNSKEILTNYSRTDMRVEGYLPNVEFVSGENQHYQSNYSCQLVDQYVPNNEMMDEKQEITSQENISSNSNLNLIPYQNEDNEYVTDKYQSDTTDGSECNSYSTIHHQASPDESFTSLDETEVYANGDVLDDLVMNVNQCYNYENGDYNADRSLYELIIQLTQKEKKSNATNSLLSYEKLQQYGLHSESADTCEPIYESNSQSISDANGNFLNSYSRYSTTAEVENANMSNALSTEFTRIEDEHMENYSTEMGTNFINTSSGFPTSERSTSNQSEHQDSRQNDSPCVILDLAPEWSYCDGGTKLLIIGPWYFQSDYSVLFDSYSVPATLIQAGVLRCYCPEHAVGLVSIQVMSSGSIISNSVVFEYKKRPDYEENVCHNLCNIKSEHYNQYMYENDTLLKFILIQRIEAIQDDAFMHSSSLINKYEVSFQN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01150337;
- 90% Identity
- iTF_01150337;
- 80% Identity
- -