Tper015219.1
Basic Information
- Insect
- Trionymus perrisii
- Gene Symbol
- SMARCC2
- Assembly
- GCA_900050545.1
- Location
- FIZV01075377.1:1974-6381[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-15 4.8e-12 46.4 0.2 3 44 534 575 532 577 0.95 2 2 4.1 7.1e+03 -2.2 0.0 23 40 636 654 634 654 0.91
Sequence Information
- Coding Sequence
- ATGGGTGGACCGCAGGACATTGGGCATCTACTGTTCAGGAAGGACGACTTTGACAGTCCTTCTCGGATGGACAGAAATATCGAAATGTTTATGAATGTGGAGAAAGCGCTGATACAAAATAAATGCCTAGCCATGCCGCAAGTTTTTATTCGAGCAGATGTGGAAAAAACTACGAGAGACAAAGTGAAAGATATAATAAAACGCCATCAGGGATCTATAACGGACAACGAAGACGAAGCTACACATATAATATACCCAGTAGTCGATCCTTGTGATGAGGAATACGCCCGAGCAGTGTTTCGAAACAAAGAAAGATGGACATTGCTGCATTGGTATTATTTTCCCGATTCGCACGATTCTTGGGTGAATACCGAAATACCGGTGGATCCTCCGGAATTGCCGCCATCTTATAATGCCAACACCAAATGGAAGGTTTCAGCGTCGTGGGCGTTAGATTTGGAGCAATACAACGAATGGATGTCGGAAGAAGACTACGAAGTGGACGAAGGCGGTAGAAAAAAAGTGCACAAGTTTCGTTTATCGGTAGACGATCTGATGGCGGCTATGGATCCCGAACGAACTAAGAAGAAACAGAAACGCAAAAGGTCGCCCTCGCCCGACTTACGTAAACAACTGAAACGAAAAAGTACACGCGGACCGTCTACTCCTTCTACTCCGTCGatgaatgcgaaaaaaatgaaaaacgacgACGACAGTGGTACGGACGACTTGACCAAAGACATGGAAGAACCTGTGCCAGAACCTAACGTTCAAGAGATCAACATAACGAAACTGGCGCACTCGACTGCGGCGGCAGcatcgtcgtcttcgtcgtcgtcgtctaaAAAAGACAACGAGACGCAACCGCTGAAAAGCGCCACATTGACAGATTTGGACGAAGAAGTAGATAAAGGCGAAGATAGTCAAGCGGCTAAATTTCCAGTCGATCCGAGTAATCAGGATGCTTCGATCAAAGACGAAGGTCAAGAAGACAACGTTACCGAACAAACGCACCACATCATCATACCCAGTTACGCGGCTTGGTTCGACTACAACTCCATTCACATGATCGAGAAACGAGCGTTGCCCGAATTCTTCAACGGTAAAAACAAGTCGAAAACGCCGGAAATTTACCTGGCCTATCGTAATTTCATGATCGATACGTATCGCTTGAATCCGACCGAATATTTAACGAGCACGGCGTCTAGAAGGAATTTGGCCGGCGACGTTTGCGCCATTATGAGAGTACACGCCTTCCTGGAACAGTGgggtttgataaattatcaaGTGGACGCGGACAGCCGACCTACGCCGATGGGACCGCCTCCTACGTCGCATTTCCACGTACTGTCCGATACGCCGTCCGGCCTGCAGCCCATTAATCCGCCTAAGACGCCGCAACCGTCCGCTGCCAAGACCTTACTCGATTTGGAGAAACGTTGCGATTCAtcagcggcggcggcggcggccgCCGCCGCCTCCTCTTCCATTAAGAAGACCGAACCTTTGGACGCTAACGCTAATTTCGGCTTAAGACTAGATCAGTACGGTAAACGGGCCGgcttattgaaaaacaaaaccgcCGCCGGCCTAACCAGGGATTGGACGGAACAAGAGACGTTGCTGCTGTTGGAAGCTCTGGAACTGTACAAAGACGATTGGAACAAAGTATGCGAACACGTGGGTACTCGTACGCAGGACGAATgcattttacactttttaagGTTGCCCATCGAAGATCCGTAtttggaagattttgaaaCGGGTGGCGCTCTCGGTCCGCTCGCCTATCAGCCTATCCCGTTCAGCAAAGCCGGTAATCCGATTATGTCGACGGTCGCGTTTCTCGCGTCTGTCGTCGATCCTAGAATCGCATCGACTGCCGCCAAGGCTGCCATGGAAACGTTTGCCGAAATCAAGGACGAAGTACCCGCTTCGCTGATGGATTCGCACATAAGGAATGTCGAAGCTTCCATCGTCGATGGTAAATTCGATCCGACAGCCGGTCTACTGCAGAGCGGTATCGCCGGCACCGAGAAGGAGGACGAtacggcggcggcggcggcggcggcggcggctaCTGTTGCTGTCGATAAGTCGAAAAAAGAAAGCGGCAGCTCGGTCGCGGACGCGGCGACCAAAGATGGCGCTAGCAACAGCGTCGCTGGGAACGCCGCTTCGCCCGAATCGGAAAAATGTGGCGCGGAATCGGCCGAAATAAAAGATACATCTTCGGAGAAGCCAACCGTCGCCAATTTCGACGAATCTTCATCTGGCGTGGACGTGCCTAAAAAGGAACCGACCACCGAACGTACCGCAGACGAATCTGTCGAACCCAAAGAAGACAACGAACGTACTAAACTAATTAAAGACGCGCAACTGCAGTCGGCAGCCGCTGCCGCGTTAGCTGCGGCCGCCGTAAAAGCTAAACATTTGGCGGCGGTCGaagaacgaaaaataaaatcgctgGTCGCCCTGCTCGTCGAAACGcaaatgaaaaagttggagATCAAACTGCGTCATTTCGAAGAATTGGAAACTACGATGGAGAAGGAACGCGAAGGATTGGAGTATCAACGTCAGCAACTGATCACGGAACGTCAACAGTTCCATTTGGAGCAGATCAAAGCGGCCGAATTTCGCGCTCGTCAACAAGCGCAACAACGAAACGCCGccgaacaacaacaacaacagcagcagcaacaacaacaacaacaacaacagcagcagcagcagcagcagtag
- Protein Sequence
- MGGPQDIGHLLFRKDDFDSPSRMDRNIEMFMNVEKALIQNKCLAMPQVFIRADVEKTTRDKVKDIIKRHQGSITDNEDEATHIIYPVVDPCDEEYARAVFRNKERWTLLHWYYFPDSHDSWVNTEIPVDPPELPPSYNANTKWKVSASWALDLEQYNEWMSEEDYEVDEGGRKKVHKFRLSVDDLMAAMDPERTKKKQKRKRSPSPDLRKQLKRKSTRGPSTPSTPSMNAKKMKNDDDSGTDDLTKDMEEPVPEPNVQEINITKLAHSTAAAASSSSSSSSKKDNETQPLKSATLTDLDEEVDKGEDSQAAKFPVDPSNQDASIKDEGQEDNVTEQTHHIIIPSYAAWFDYNSIHMIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTASRRNLAGDVCAIMRVHAFLEQWGLINYQVDADSRPTPMGPPPTSHFHVLSDTPSGLQPINPPKTPQPSAAKTLLDLEKRCDSSAAAAAAAAASSSIKKTEPLDANANFGLRLDQYGKRAGLLKNKTAAGLTRDWTEQETLLLLEALELYKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDFETGGALGPLAYQPIPFSKAGNPIMSTVAFLASVVDPRIASTAAKAAMETFAEIKDEVPASLMDSHIRNVEASIVDGKFDPTAGLLQSGIAGTEKEDDTAAAAAAAAATVAVDKSKKESGSSVADAATKDGASNSVAGNAASPESEKCGAESAEIKDTSSEKPTVANFDESSSGVDVPKKEPTTERTADESVEPKEDNERTKLIKDAQLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEKEREGLEYQRQQLITERQQFHLEQIKAAEFRARQQAQQRNAAEQQQQQQQQQQQQQQQQQQQQQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01263299;
- 90% Identity
- iTF_00194247; iTF_01150282;
- 80% Identity
- -