Tper001526.1
Basic Information
- Insect
- Trionymus perrisii
- Gene Symbol
- clz9
- Assembly
- GCA_900050545.1
- Location
- FIZV01036491.1:1051-2667[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7e-12 4e-09 36.6 0.0 1 37 18 55 18 61 0.93
Sequence Information
- Coding Sequence
- ATGCCAAGCAAAGTTAGTCCACAGGAGCTTGTACGGCGTCGCAGAGGTTATTCAGAGGAGGATTTAGACAGAGCTCTTTCTGCTATTAACCAAGGTGGTGTACCTATACGCGAAGCAGCCAGCACGTACTCAGTGCCATACACTACACTTCAACGAAGGAGAAAAGACGCCGATAATGATGCAACTTTTCAAAGACCAGGTCCAAAACCCAAATTAGGTCATCATATCGAAGCTGGGTTAGTTGAAGCGATAATAGCATTTGAACGTTTGGGATATGGTCTCGGCAGGGCTGAAATAAAGAGCCTAGCAAAACAGATTGATTTACGGCAAGGTTCATCTGCTTTCGGAGAAGGAGATCCGTCTGACATGTGGTTTAAGCgattttcatccagaaacgAATTATCAACGAGAATTCCAAGATCGTTTGCCAAAAGCAGAGACGAAATGACCACAGAAGAAGTCCGTGACGACCTATTTGCAACTTACAGAAAAATACGGGAGCGGTTTAATTTCTCCGCTCAACATATATATAATATGGACGAATCTGGTCTTCAAATAGTATGCAAACCTTTGAAAGTTGTAACCAGAAGAGGTGCAAAAACTGTGTATGCTAGGCAAGAGAGCGAAAGAAGCGAAAACATTACAATTGTTGCTGCTGGAAACGCATCCGCTAATACTATAGTGCCTCCGatggtcattttcaaaaatggctacTTAACGTCAAAAATTCGCCCGGCACAATTTCCAGCAAATACAACGTTTGCAGTTACAGACAGCAGATATATGACATCAGAATTATTTCTTCGCtggtttgagatttttttggaaaacattccGCCGGTGAGACCAATTCTACTTCTGTTGGATGGGCACGCGTCGCATGTCTCATTGGAGTTAATTGAAAAAGCGAAAGAAAATCAAGTTCATTTATTAGTGTTGCCACCCCATACCACTCATATCTTTCAACCCCTGGATGTGTCTGTCTTCAAACCTCTAAAAGATAATTTCAAGAAACAACTTCGAATTCGTATGAGGAAATTCCGATCGATCAAGAAATATGACTTCGGTAAAGTTTTTACTCCAGCTTATTACGAATCGGTCACGCCTATGAACTTAATTAATGGATTTCGTAAAACCGGTTTTTGGCCTGAGAATAAATTTGCTGCtgatttaaatttacctaaaaacgAATCTGACCAAAACGAATCTAATTCTTCAAACACGACAGTTTCGCCTTCAACTCCTGATGATCTCCCTTCTACATCTTCCTCGGTAACTCCGACACCCTCATCGACGAGCTCGACAGCATCTCAGTCCATCAAAGAAgtaatttcctcatttttaaaaccatcgCCTCAGAAACAGAATGCCAAAAAGTCAAGAAGAATAACGGTTGCAAGATGTTTGACTCACGACGAAATGACAAAAGAAATCGAAAGATTAGAGGAACCagtaaaaaaggtaaaaaattttgatcaaatctttgaaaacttcCGCACCcgtaatttattaataattttgatttttttttttaatgaacaaacACGAAAACTTGGCGCTAAAAAAGTGTATTTATGGCAGAGATGGGGCGGTTCGAATCGAATAAAAGAACCGTAA
- Protein Sequence
- MPSKVSPQELVRRRRGYSEEDLDRALSAINQGGVPIREAASTYSVPYTTLQRRRKDADNDATFQRPGPKPKLGHHIEAGLVEAIIAFERLGYGLGRAEIKSLAKQIDLRQGSSAFGEGDPSDMWFKRFSSRNELSTRIPRSFAKSRDEMTTEEVRDDLFATYRKIRERFNFSAQHIYNMDESGLQIVCKPLKVVTRRGAKTVYARQESERSENITIVAAGNASANTIVPPMVIFKNGYLTSKIRPAQFPANTTFAVTDSRYMTSELFLRWFEIFLENIPPVRPILLLLDGHASHVSLELIEKAKENQVHLLVLPPHTTHIFQPLDVSVFKPLKDNFKKQLRIRMRKFRSIKKYDFGKVFTPAYYESVTPMNLINGFRKTGFWPENKFAADLNLPKNESDQNESNSSNTTVSPSTPDDLPSTSSSVTPTPSSTSSTASQSIKEVISSFLKPSPQKQNAKKSRRITVARCLTHDEMTKEIERLEEPVKKVKNFDQIFENFRTRNLLIILIFFFNEQTRKLGAKKVYLWQRWGGSNRIKEP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -