Tper021121.1
Basic Information
- Insect
- Trionymus perrisii
- Gene Symbol
- bab2
- Assembly
- GCA_900050545.1
- Location
- FIZV01030069.1:5393-8048[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-11 1e-08 35.3 0.0 1 39 474 513 474 517 0.90 2 2 0.00038 0.22 11.9 0.0 2 26 529 553 528 553 0.93
Sequence Information
- Coding Sequence
- ATGGCCAACATCGGACAGCACTATTGCTTGCGATGGAATAATTATCAGTCGAACATGACGTCTGTGTTTTATCAATTACTACGCACCGGAGCTTTCGTCGATGTCACATTGACctgtaatgaaaattctctaaaagcTCATAAGGTAGTTTTATCAGCATGTtcttcgtattttcaaaaattactcacaGATAATCCGTGCAAACATCCGACCATAATATTACCGCAGGAAGTTGGCttcaatgatttgaaattcatcATCGATTTCGTATACCGTGGCGAAATCAACGTTTCAGAAGCAGAGCTACAATCTTTGCTCAAGACGGCCGATCACTTGAAAATCAAAGGATTATGCGAAGTGCCAGAAGGCGAAGAAGACGAAATGGACGAGACCGGTTGCGGCGAATCAGTAACCGATGTCAGCGTTCTAGGTGCTCACATGATGATGATGGATAAATCATCGACGCAGAAACAACACAAAATACTCACCAAATTAAAACCCACTTTGCATAAATTTGCTGCCAATATCAAACGAAAGCATCTGCCGCAAGATTTAAATAACTCGCGAAAATATTACATCAAAGATACCAAATGCGGTACTGGTACTCACTTAGAACAAGGGTCAGTCCAACTGATACAAGCCAGTACCATAAATCCAAACGATATTCTAGATACGACGAATAATACCCAACAATATCACAACATGCAACCGTCATCCAATTGCATCACAGTTGCCACATCGACAGAAGAAGACGGCAAAGCAAAGTCAACGACCAACAACATACCAGTAGTAATTTTAGATAACCGCCATCAGCAACAAATGTCAACGACAGTTCATTCCTCCTTACATTACGTCCAACAAAGCAAtcagcaacagcaacaacgATGCCAGCAGaacgaaaaaatcatcatgaGTAGTCCATCGCCGCTGATGACCTCCTGTACTACTCTCACAACTTTACAACCTCAAcagTCTTTACTTTTAGATCAAAGTAGCCATCACCTTGGACCAACGCCGTCCCAAATATCGAATGCTGAAGATAAACAAACCGATGTAGAGATGATATCAGAAGGACAGCCTCCAGGACCTACGGCTACTCCTGTACATTGTCATTCGATTGAAATGCAGCAGCACAGTCCCACCCATCGAGACATCGCTGTTGACACCTCAGGAATGCAAACAGACGACATGAaagttaaatttgaaactttgaggACCATGGATCAAACTTCAGATAGCATGGATACGATCGAGAATCACATGTCCGAGCACagcaTGAACGACGACGAGCATACAATGCAAACGATGATGATCACTCCAGAATTACTAGGACTAATACCATCTACTTCATCTGCTCCTTCTTCCGAAGTCGGCAGTGATAACGGTAAAAACAACATGACATTGTCCAAAAAAGATTGGACCCAAGATGATATGGATGCTGCGTTAGATGCCCTCCGAAATCATCACATGAGTTTAACCAAAGCTTCTCTAACTTTCGGCATTCCATCGACAACGTTATGGCAAAGAGCTCATAGACTCGGTATAGATACTCCTAAGAAAGACGGTCCTTCTAAATCTTGGAACGAAGACGTTCTTAACGTAGCTCTAGATGCATTACGAACTGGATCTCTCAGCGCGAACAAAGCCAGTAAAGCTTATG
- Protein Sequence
- MANIGQHYCLRWNNYQSNMTSVFYQLLRTGAFVDVTLTCNENSLKAHKVVLSACSSYFQKLLTDNPCKHPTIILPQEVGFNDLKFIIDFVYRGEINVSEAELQSLLKTADHLKIKGLCEVPEGEEDEMDETGCGESVTDVSVLGAHMMMMDKSSTQKQHKILTKLKPTLHKFAANIKRKHLPQDLNNSRKYYIKDTKCGTGTHLEQGSVQLIQASTINPNDILDTTNNTQQYHNMQPSSNCITVATSTEEDGKAKSTTNNIPVVILDNRHQQQMSTTVHSSLHYVQQSNQQQQQRCQQNEKIIMSSPSPLMTSCTTLTTLQPQQSLLLDQSSHHLGPTPSQISNAEDKQTDVEMISEGQPPGPTATPVHCHSIEMQQHSPTHRDIAVDTSGMQTDDMKVKFETLRTMDQTSDSMDTIENHMSEHSMNDDEHTMQTMMITPELLGLIPSTSSAPSSEVGSDNGKNNMTLSKKDWTQDDMDAALDALRNHHMSLTKASLTFGIPSTTLWQRAHRLGIDTPKKDGPSKSWNEDVLNVALDALRTGSLSANKASKAY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01491182;
- 90% Identity
- iTF_01491182;
- 80% Identity
- iTF_01491182;