Tper023459.1
Basic Information
- Insect
- Trionymus perrisii
- Gene Symbol
- Arid5a
- Assembly
- GCA_900050545.1
- Location
- FIZV01080099.1:1-785[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-25 1.8e-21 76.9 0.2 2 89 22 107 21 107 0.95
Sequence Information
- Coding Sequence
- cagcAGACTGGTATCAAACGACCCGATTCCAAGAAATTGCCTAATAATCAAGTCTTAGTGGCTCAGCAAGCATTTACCCAGAATTTATACGCTTTTATGAAAGCTCGTCTTACTCCCATCGGTAGACTACCTCTGATTGGCAACAAAGAAAtaaatttatacgaattttATAACAAGGTGAAATTACTGGGGAATTACGCCTCGGTgactaataataaattatggaAGTACGTTTTCGAAGAATTAGGCGGCGATCGCGGTGATCCTTCGATGGCAACGTTGATGCGGAAATATTACGAAAAATTTCTACTACCTTACGAGCAACATATGCTACAACAGTTGAAGCATTCGTCGGCCAATCAATCGACCAGCAGCGGTAGCGGTGGCGTTATCAAATCTGTGAGTATGATATTCGTGAGTAGGCTTAATACCGAGCATTACTTCTTCACTTTGAgcatccataaattttttttacctctaaTGCTACGCCTAATTTATTTGCAACTGGTGTACGGTGCCCTAtga
- Protein Sequence
- QQTGIKRPDSKKLPNNQVLVAQQAFTQNLYAFMKARLTPIGRLPLIGNKEINLYEFYNKVKLLGNYASVTNNKLWKYVFEELGGDRGDPSMATLMRKYYEKFLLPYEQHMLQQLKHSSANQSTSSGSGGVIKSVSMIFVSRLNTEHYFFTLSIHKFFLPLMLRLIYLQLVYGAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -