Basic Information

Insect: Trilocha varians
Gene Symbol: stc
Assembly: GCA_030269945.2
Location: AP028269.1:2654780-2661547[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3 2.9e+04 -4.3 1.6 15 19 484 488 483 488 0.81

2 14 0.049 4.6e+02 1.6 0.6 4 10 518 524 517 524 0.95

3 14 5.5e-05 0.52 11.0 18.1 4 19 532 547 530 547 0.93

4 14 2.8e-08 0.00027 21.5 12.0 1 18 583 600 583 601 0.97

5 14 0.00013 1.2 9.9 11.8 1 18 638 655 638 656 0.97

6 14 1.4e-05 0.14 12.9 11.5 1 19 697 719 697 719 0.88

7 14 3 2.9e+04 -5.3 2.2 6 10 749 753 749 753 0.94

8 14 0.28 2.7e+03 -0.8 11.5 1 11 759 769 759 770 0.94

9 14 0.12 1.2e+03 0.3 0.2 3 10 773 780 773 782 0.93

10 14 1.6e-05 0.16 12.7 14.9 3 19 788 804 786 804 0.92

11 14 0.0015 14 6.5 11.3 8 18 849 859 843 860 0.79

12 14 0.56 5.4e+03 -1.8 1.0 8 13 865 870 864 871 0.83

13 14 1.5e-08 0.00015 22.4 13.0 1 17 896 914 896 920 0.83

14 14 0.0052 50 4.7 7.6 1 13 926 937 926 938 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3	2.9e+04	-4.3	1.6	15	19	484	488	483	488	0.81
2	14	0.049	4.6e+02	1.6	0.6	4	10	518	524	517	524	0.95
3	14	5.5e-05	0.52	11.0	18.1	4	19	532	547	530	547	0.93
4	14	2.8e-08	0.00027	21.5	12.0	1	18	583	600	583	601	0.97
5	14	0.00013	1.2	9.9	11.8	1	18	638	655	638	656	0.97
6	14	1.4e-05	0.14	12.9	11.5	1	19	697	719	697	719	0.88
7	14	3	2.9e+04	-5.3	2.2	6	10	749	753	749	753	0.94
8	14	0.28	2.7e+03	-0.8	11.5	1	11	759	769	759	770	0.94
9	14	0.12	1.2e+03	0.3	0.2	3	10	773	780	773	782	0.93
10	14	1.6e-05	0.16	12.7	14.9	3	19	788	804	786	804	0.92
11	14	0.0015	14	6.5	11.3	8	18	849	859	843	860	0.79
12	14	0.56	5.4e+03	-1.8	1.0	8	13	865	870	864	871	0.83
13	14	1.5e-08	0.00015	22.4	13.0	1	17	896	914	896	920	0.83
14	14	0.0052	50	4.7	7.6	1	13	926	937	926	938	0.95

Sequence Information

Coding Sequence: ATGTCGCAGTGGAACAACTCTTATGCCTACAACGGTCAATACCAAGCATCTAACGGCTGGAACGGCGATGCTAATGCTCAGTACGGAAACCCACAATACTTCGCGAACGGGCAGGATACCGCCAACCAGTATGTGAGCTTCAATGAATTCTTAACACAAATACAGGGTAGGACTCCAGCTCAGGGTAATTCATCTCAATACAATAATGTTAGGTATGAAAACTATCCAAACACCCAATACAATTATCAAAATATGCCATCTACATCACATAGAACTGTAGATAGCtataattatcaaaataatagtAACCCAAGGAATCCAGAGATGTACCAAATGAATGTGCAAAATCAATACCATGGGCCCCCTGAAACTTTTCAAAATGATATTATACTGAAATCTAACCTTACTCCTACTGCAATGGAGTTTGTTCCTAAAAGTATGGTTCAAGCAAGCTCTAGCTGTCAAAACTTAGCAGAACCTGTGAATAATCATAGCTCTAATGAAACAAACTGGAGAGAAAGACAGCAGAGTTCTCATCAAAATGGTGATGTGACAAACCATCAGGTTACTGAGTCTAGAAGCCAAACAAACAAGCCCCAAACTAAGGCACATAACAACCATGAATCTGTTAAAAATGGTTATGAAGGTACTAGACATCGTAATAATGATCAAAGAAACAATGAAAGAAGTAATGAATCAAGTAACAGTAGTTATTATCAAAATCACAACGAAACCAAGGAATCTAAGTCTCGTCACGAAATGAACAACCGTGAAACAGCAAACAACGGTTATGACAGTGCTAGACACCGTAACAATGACCATCGGAATAATGAAAGAAATAATGAACCCAGTACCACTAATAACCATCAAAACCAATATGAAAATAAGTCTCGGTATGAAATGAACAACCGTAATGAATCAAGCAGCCGTTATGAATCTAGGAACTACAACCGCAATGAAAAAAAAGGTCCTCCACAATCTAACCCTAAATCAAAAAGAGATCCTGATGCTCGTACTTTCTACAACAGTTCTGTTGCTAAAGATAGTCAAGATGTCAGGAATGGAAGAGGTGAAAGTTCCGGAAGACAGAGGAATTGGGCTGGTAGTCAACGAGTCAAACCCTCAGAGAGGATTACTGCTGAGGATGAATATTATGCTAACACATACACTCAGCAGAGACAAGAAAGAATGGAACGAAAGGCTGAAACTTCAAGCCCAAGTAGATTTAGAAACAAGAATGTTGAACAACCAGcagTCCTGAATAAAGAAATGACACAAAGAGAGCGTCTGACTGAACAACTTGAAAAAGGAACATTAGAATGTCTGGTTTGTTGCGAGAGAGTGAAACAAACAGAGTCTGTCTGGTCGTGCGGGAACTGCTATCATGTACTCCATCTTAGGTGCATCAGGAAATGGGCTATGAGCAGTTTGGTCGATGGTAAATGGCGCTGCCCAGCTTGTCAGAACTCGAACGAAACAATACCGACAGAGTGTCGTTGTATGTGCGGTGCGATGCGCTCCCCGGAGTACCACCGCGGGCAGTATGTGGCTCACACGTGCGGCAAGCTGTGTCGCCGGCAGCGGGCCTGTCCGCATCCGTGCACTCTTCTGTGTCATCCGGGACCGTGCCCGCCATGCCAGGCTACCGTTACTaaGCAATGCGGGTGCGGTGCTGAAACTCGTTCAGTGATGTGTAGCAGTAAACTACCACAAGTCTGCGGGAAGATCTGTCAGCGCATGTTACAATGCGGAGTTCACACATGCATGAAGGAGTGTCATGAGGGACCCTGTGATGAATGTGATAAAACTGTCACACAAGTATGCTACTGTCCCCTCGCGAAGACTCGTTCCGTGGCGTGCTGCTTAGAGAAGTCTTGGTCGTGCGACGGCACGTGCGGGCGCGTGTTGTCTTGCGGCGCACACGTGTGTCGACGCACGTGCCACGCGCCGCCCTGCCCCGACTGCGATCTACTGCCGCAAGCTATCATCACCTGCCCTTGTGGGAAGACTAGGATACCTAAAGACAAGCGCAAGTCGTGTGCCGATCCGATCCCGCTGTGCGGTAACATCTGCGCCAAACCATTATCGTGTGGCCCCGCAGGAGACAGACACTTCTGTAAACTGGACTGCCATGAAGgtcCATGCCCCGTGTGCCCCGAAAAAACGTTGTTACCATGTCGATGTGGTCATTCCAACCGCGAGATTCCATGCGCCGAACTACCAGATATGTACAACAATGTGTTCTGTCAGAAGAAATGTAATAAGAAACTGTCGTGCGGTCGTCACCGTTGTCGCGCGTGTTGTTGTGCGGACACCCAGCACCGCTGCGGACTCGTGTGCGGACGCTCGCTGGCGTGCCAGACGCATCGCTGCCAGGACTTCTGTCACACCGGACACTGCGCACCCTGTCCTACTCTTAGTTTCGAAGAGCTATCGTGTTCGTGCGGTCGCGAGGTGGTGTTGCCGCCGGTCCGCTGCGGCACGCGTCCCCCGGCCTGCACCGCGCCGTGTCGCCGCCCGCGCGCCTGCGGACACGACACACTGCACTCCTGCCACACCGGGGACTGCCCGCCCTGCGTCGTGCTCACCACCAGGACCTGCCACGGGGGACACGAGGAACGCAAAACCATCCCGTGTTCGCAAGAAGAGTTCTCATGCGGCCTCCCGTGCGGCAAACCCCTGCCTTGCGGTAAACACACCTGCATCAAGGTGTGCCATAAGGGACCTTGCGACACCGGCAAATGCACTCAGCCGTGCACCGAGAAGCGTTCAAGCTGCGGTCACCCGTGCGGCGCGGCGTGCCACTCGGGCGCGGCGGAGGGCAGCCCGGGCGCCGCGTGTCCCAGCTCCGCGCCCTGCCGCCGCACCGTGCGCGCCACCTGCCCCTGCAAGAGACGGTCAGCTGACAGACCCTGCTGTGAGAACGCGAGGGACTATGACAGGATATTAGGTGCGCTTGCAGCAACTAAAATTCAAGAAGGAAGCTCTGTCGATCTCTCTGATGCACAACGTGTCATTAATATGCTCAAAACTTTGGAGTGCGACGACGAGTGTCGCGTAGAGGCACGCACACGGCAGATGGCGCTGGCGCTGCAGATCCGCAACCCCGACGTGTCCGCCAAGCTGGCGCCGCGCTACAGCGAGCACGTGCGCGCCACCGCCGCTCGCGAACCCTCCTTCGCCAACCACGTGCACGATAGACTCACTGAACTCGTGCACCTCGCCAAGAAgtCGAAGCAGAAGACCCGTTCACACTCGTTTCCGTCAATGAACAGACAGAAGCGACAGTTCATTCACGAGATGTGCGAACACTTCGGGTGCGAGAGCGTGGCGTACGACGCTGAACCCAACCGAAACGTTGTAGCCACTGCCGATAAAGAAAAGTCGTGGTTGCCAGCTATGAGTATAATGGAAGTATTAGCTCGCGAGGCAGGCCGGCGCCGCGTGCCCGGACCCGTGCTGCGACAACCGAACGCACCGCATCACGCCGCGCCCCCCACTACTCTTCCCACGAACAAGTCCGGCAGTGGATGGGCCACGCTCACGTCGTCTAATTCCTGGGCGTCCCGCAGTCAGCCCCGGCCCTCCGCCGCGCCGCCCCAGATAGACCACTTCGACAACCCCACGGAGAAATAG
Protein Sequence: MSQWNNSYAYNGQYQASNGWNGDANAQYGNPQYFANGQDTANQYVSFNEFLTQIQGRTPAQGNSSQYNNVRYENYPNTQYNYQNMPSTSHRTVDSYNYQNNSNPRNPEMYQMNVQNQYHGPPETFQNDIILKSNLTPTAMEFVPKSMVQASSSCQNLAEPVNNHSSNETNWRERQQSSHQNGDVTNHQVTESRSQTNKPQTKAHNNHESVKNGYEGTRHRNNDQRNNERSNESSNSSYYQNHNETKESKSRHEMNNRETANNGYDSARHRNNDHRNNERNNEPSTTNNHQNQYENKSRYEMNNRNESSSRYESRNYNRNEKKGPPQSNPKSKRDPDARTFYNSSVAKDSQDVRNGRGESSGRQRNWAGSQRVKPSERITAEDEYYANTYTQQRQERMERKAETSSPSRFRNKNVEQPAVLNKEMTQRERLTEQLEKGTLECLVCCERVKQTESVWSCGNCYHVLHLRCIRKWAMSSLVDGKWRCPACQNSNETIPTECRCMCGAMRSPEYHRGQYVAHTCGKLCRRQRACPHPCTLLCHPGPCPPCQATVTKQCGCGAETRSVMCSSKLPQVCGKICQRMLQCGVHTCMKECHEGPCDECDKTVTQVCYCPLAKTRSVACCLEKSWSCDGTCGRVLSCGAHVCRRTCHAPPCPDCDLLPQAIITCPCGKTRIPKDKRKSCADPIPLCGNICAKPLSCGPAGDRHFCKLDCHEGPCPVCPEKTLLPCRCGHSNREIPCAELPDMYNNVFCQKKCNKKLSCGRHRCRACCCADTQHRCGLVCGRSLACQTHRCQDFCHTGHCAPCPTLSFEELSCSCGREVVLPPVRCGTRPPACTAPCRRPRACGHDTLHSCHTGDCPPCVVLTTRTCHGGHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKVCHKGPCDTGKCTQPCTEKRSSCGHPCGAACHSGAAEGSPGAACPSSAPCRRTVRATCPCKRRSADRPCCENARDYDRILGALAATKIQEGSSVDLSDAQRVINMLKTLECDDECRVEARTRQMALALQIRNPDVSAKLAPRYSEHVRATAAREPSFANHVHDRLTELVHLAKKSKQKTRSHSFPSMNRQKRQFIHEMCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSIMEVLAREAGRRRVPGPVLRQPNAPHHAAPPTTLPTNKSGSGWATLTSSNSWASRSQPRPSAAPPQIDHFDNPTEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -