Tvar010397.1
Basic Information
- Insect
- Trilocha varians
- Gene Symbol
- pnr
- Assembly
- GCA_030269945.2
- Location
- AP028267.1:13833173-13836543[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-16 3.8e-13 49.4 3.3 1 35 485 518 485 519 0.97 2 2 3e-18 9.5e-15 54.6 7.4 1 35 546 579 546 580 0.97
Sequence Information
- Coding Sequence
- ATGGAGAACGTGAACCAGATGGTGCGAGTGAGCGAGGAGCAGCGCGACGACGAGAACGCGCACGCCGTCGAGGCGCTGCAGCTCGTCAAGAACGAGGAGAGACACGACGCCGAGCAGACCGACCCCGGACCCGCCGCGTCCACCGACACCCCGCTGGGCAGCGCCGGCCCCAGCCCTGACCAGCCACCCGCCGCGCACTCCGTCATCACGTCGAGGCGGGCCGTGCGCACCATCACCGCCGCCGGACACATCACCACCGACGAGGGGGGCGAGCTCGGTGCCGACGAAGGCGTGAAGGACGAGCCGCCCGAGCACGCGCACCTCGAGCACGAACATCACATGCAGCAGTACGCGCCCAAGCTGGAGGAGAGCGGCGACGCGCGCGATCTGCAGCACCAGCACCAACACTACGACGAGGAGCGGCTGCGGCTCGCGGAGGCGGAGACGGCGCGCTACCTCGCCTTCAAGCAGGAGCCATACCGCACGCTGCAGTCACCGCTCCCCGTCGACAAGAGACTGCCGCCGCAGTACGCGCGCCCACCCGTTCAGCGACCCGCGTACGGACGCGGCCTGGCACTCAGGTACGGAGCACCGCACCACGTCATTGTGTCGCAGGAAGGGGATGGAGAAGAACAACAACATGAAGCATTCCTCTCTCACAAGGATAAAGGCGAGCTACAAGCGTACGCTGCTACTAGTGAAGCAGCTAATGTTCCTGTTGACGGAAGACAGTATGCAGCAGTGCTCAGTGACCAGGTGGCCGCCTCCACGGCGCTAGAAATGATACAAACAACCGCGTTGAACAACCAGCAGTCAGTGGGAGTGGCGTATCAACAAGTGAAGTACGAGACACGAGGCGAGCCGGAGCCGCGACCCACCACGTATGCCAGCCTGCAGCCGGTGACGTCGGTGCACGGCGGGTACGCATATGCCAGCCAGAGCCCGCAGTATGGCAGTGCTAGTTACAGCGCATACGGCTCCAACAACAAGGAGCTGCTCACCTTGTACGGCGGTGGTGGCGGCACGGGTACAGGTGCCAGTGGTGCAGGGGCGGGGGGGGCGGGGGCTCCACGCGGGGACGAGTCTCCACCCGGACAGCTGCTGTACCGCAGCGACCCCACGCTCTCGTCCTCCTCGCTTACGACGCGAGGGGCGCACGTCGTCTACGGCTCCGTCGTGCCGCAGTCACAAACTGTGTACGAAGCACCTCCCAGTCCCAACTCGCAACAAGTAACATTGTACACTCACGGTAACACGGTCCAGTACAAAGTGGGTGGCGAGCACTACCTGGGCCAGAGCACGGGCGTGGAGTACGTACCGGTGTCTGGCTACGAGGGGGGGCTGCTGGTCGAGGGTTACCCCGCGCCTACGCAGGCCTGGCCCGCGCACAACCTGCTGCCCATCGACGACGGCTTCGACCCCAGTATGGCCGGTATGGGCGAGGTGAAGGAGTGCGTGAACTGCGCGGCGGCCACCACCCCGCTGTGGCGACGCGACGGCACCGGACACTACCTGTGCAACGCGTGTGGACTATACACCAGGATCAACGGCGTCAACCGACCACCGCTCAAGGGACAGAAAGCTAAACCACAACAAGCGCTGccaagcaacggtaaccgtcgCATGGGAGTGACGTGCGCCAACTGTCGCACCACCAACACGACGCTCTGGCGACGCAACAACAACGGCGAGCCCGTCTGCAACGCGTGCGGACTCTACTTCAAACTACACAACGTCAACCGGCCGCTCAGCATGAAGAAGGACGGCATCCAGACCCGCAAGCGCAAGCCGAAGAGCATGGGCGGCGGGCACGGCGGCGTGGCGCGGCCCCCCGGCGGCGGCTCGCTCTCCGTGGAGGCACACTCGCACAAGGTGCTGCCTCCGCTGTACGCGGCGGTGGAGTCCCCCGGCTCGGCGGCGCCGCTGCTGCTGCTGCAACCCGCGCGACATCACGACCTGATATCAACGCTAGAGCGAGGAGCGACGACGTCAAGCGGCGTCCACTACCGGCCTCCGTAA
- Protein Sequence
- MENVNQMVRVSEEQRDDENAHAVEALQLVKNEERHDAEQTDPGPAASTDTPLGSAGPSPDQPPAAHSVITSRRAVRTITAAGHITTDEGGELGADEGVKDEPPEHAHLEHEHHMQQYAPKLEESGDARDLQHQHQHYDEERLRLAEAETARYLAFKQEPYRTLQSPLPVDKRLPPQYARPPVQRPAYGRGLALRYGAPHHVIVSQEGDGEEQQHEAFLSHKDKGELQAYAATSEAANVPVDGRQYAAVLSDQVAASTALEMIQTTALNNQQSVGVAYQQVKYETRGEPEPRPTTYASLQPVTSVHGGYAYASQSPQYGSASYSAYGSNNKELLTLYGGGGGTGTGASGAGAGGAGAPRGDESPPGQLLYRSDPTLSSSSLTTRGAHVVYGSVVPQSQTVYEAPPSPNSQQVTLYTHGNTVQYKVGGEHYLGQSTGVEYVPVSGYEGGLLVEGYPAPTQAWPAHNLLPIDDGFDPSMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPSNGNRRMGVTCANCRTTNTTLWRRNNNGEPVCNACGLYFKLHNVNRPLSMKKDGIQTRKRKPKSMGGGHGGVARPPGGGSLSVEAHSHKVLPPLYAAVESPGSAAPLLLLQPARHHDLISTLERGATTSSGVHYRPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -