Tvar017685.1
Basic Information
- Insect
- Trilocha varians
- Gene Symbol
- CSRNP3
- Assembly
- GCA_030269945.2
- Location
- AP028276.1:15167257-15169503[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.34 9.7e+03 -3.1 1.6 92 111 69 89 44 119 0.44 2 4 6.9e-103 2e-98 329.3 6.0 2 218 219 427 218 427 0.93 3 4 0.33 9.5e+03 -3.1 0.4 98 98 509 509 445 547 0.53 4 4 0.15 4.2e+03 -1.9 1.0 104 112 663 671 589 730 0.56
Sequence Information
- Coding Sequence
- atgGACAACAACGACCTAGAGTCAGTTCCAGAGAACGAAGTAAAGGAACCTGCCAGTGAAGAActgaaaaatattgaaacaaatgCTGTTCAAATGAACCCAGAACCAGACGTACTTCCAGTACTTGGAGATGAAAAAAGTTGTGATAGTGATACACATAGTGATAACCTTAGTTCTAATGATGAACAAACTCCAAGAGGTAACTCTCAATTTTATGAGAGCAGTGACAGTAAAGTAGACTATGCAGTAAAAGCAGATGATAATGATACGTTAAGTGACGTTGATGATATAAAAACAGATAGTGCATCAGCAGACAGTGAAGATTCGGCACTTGGCAGTTTACCTCCTGATTCTACTCCTAATGAAAGAGATGAAGAAATCCAGGATCGATCAGAAGGCAGTGACTCGGGTTTTGGATCTGAAGCAGCTATTGACGCAAGTCTACCACGCTTCGACTTGTCACTGCCATGTCCAAAAGAAGAGGacaaagattttgataacacaGATCGCAAGAAAGACAGTAATTCTACAGATGGTAAAGATGAAGGATGTGAGGATAATACTAACAAAATAATTCAACCATGTGTGACTCTTAGAAGTACTCTTAAAAGAAAACATAATGATGAAGATGGTAATGAACTTGAAATCAAAAGAAGAAAAGAAGGAATACGTTTTGACAACGTGACAGTATTCTATTTTCCCAGAGCACAAGGATTTTCATGTGTTCCATCTCAGGGTGGTTCGACATTGGGCATGGAATGGGAACATTCGCATATTCAAAGGTTCACATTAGCAGAACATGCTTTAGAACAAAGAAGATTGCATAGACAAATATTACAACAGCTGAAAAGTGAGCGAAATTCTCTGAAAGGTGATTTACTTTCATCTAGTGAGGACAGTGATACAGAAGAGGAAGCGAGTGATATTTCCGAGTCAGAATTAGATTTAGATAATTACTACTTCTTACAACCTGTGCCGACAAGACAAAGACGAGCTCTTTTGCGAGCTGCAGGAATAAGGAAAATAGAAGGTTATGAGAAGGATGAATGTAGAGACATAAGGACATCTCGAGAATTCTGTGGTTGTGCATGTAAAGGATCATGCAATCCGGAAACCTGTTCATGTAGTTTGGGTGGGATAAAATGCCAAGTAGACCGCCTAAACTTTCCTTGTGGTTGTACTAGAGACGGGTGTGGCAATACTACAGGTCGCATTGAGTTTAACCCTGTTAGAGTAAGGACACATTTTATTCAAACACTTATGAGGCTAGGAATGGAAAAGAAAAACGAAGAGAATCATGAAGCTGCCAAGAAACAATGGCAACATACAACCGACGCACACAACACTAATCCAAACGGGTGCCTACCCAATCATCTCTACGAAAGAGAACGTTGTCTCCGACAAGAAGATGGGTTGCTACGCGATGTTAATTTAACACCCAGAATAGAAGTTGAGTCATGTGTAAATTCTGGGAACTACAGCAATGTTCACTGCAATAACGCACAAAGGAATATGCAAGACAATTTATCTTATAACTACAATAATCACAACTGTAATTCTACAAGTATGACTGAAAATGGGATGATGAACTTTGAAAATGCTAATTCTCATCATCACCACGCTGAAGCGTACACATCGAATATGCAACAAGGAAAAGGTCCACCTTACTCTGTGGCTAACCCTATAGGGTTCGAAACGACTGCAAACATGCAAAGTTTCCCATCTGACATGAATTACACATACGACCAACACACGATAGATACACATCACTTCAAAGGGCTTCAAAGTTTTCCAGCTTCTAGCTTTGAGGAATTCGCGCACAATTCACAAATGGCAATGTTCAGTCACTATGGGCACATGTATGTACCGGATTATTTACAAAAGCAAAACACAAACGTGCACGATTATAATCAAACTGCATATCATGGAATGGgtcaaaataattatgaaatgtataaaaataattcagaAAATGTGAacgtagaaaataaaaatgactcTAATTATACCACATTAATGACAATGCCATATCAACCTAATAATAAGCTGCAATCTGTAGAAAATGACGAGAACTGGTTTAGCCAGAACACATTACTGAACTTGGATCATTCCGACCAAACCACTCAAGATGCTGCAGACACTAGATCTCAGGCTTCAGAGCCTCTCACAGAAAGCAATACTGCTGAGACTGCCGATAATTTTGGAgaacttattaaaaaaacaatggtaGAATCTGTTACTGTGTAG
- Protein Sequence
- MDNNDLESVPENEVKEPASEELKNIETNAVQMNPEPDVLPVLGDEKSCDSDTHSDNLSSNDEQTPRGNSQFYESSDSKVDYAVKADDNDTLSDVDDIKTDSASADSEDSALGSLPPDSTPNERDEEIQDRSEGSDSGFGSEAAIDASLPRFDLSLPCPKEEDKDFDNTDRKKDSNSTDGKDEGCEDNTNKIIQPCVTLRSTLKRKHNDEDGNELEIKRRKEGIRFDNVTVFYFPRAQGFSCVPSQGGSTLGMEWEHSHIQRFTLAEHALEQRRLHRQILQQLKSERNSLKGDLLSSSEDSDTEEEASDISESELDLDNYYFLQPVPTRQRRALLRAAGIRKIEGYEKDECRDIRTSREFCGCACKGSCNPETCSCSLGGIKCQVDRLNFPCGCTRDGCGNTTGRIEFNPVRVRTHFIQTLMRLGMEKKNEENHEAAKKQWQHTTDAHNTNPNGCLPNHLYERERCLRQEDGLLRDVNLTPRIEVESCVNSGNYSNVHCNNAQRNMQDNLSYNYNNHNCNSTSMTENGMMNFENANSHHHHAEAYTSNMQQGKGPPYSVANPIGFETTANMQSFPSDMNYTYDQHTIDTHHFKGLQSFPASSFEEFAHNSQMAMFSHYGHMYVPDYLQKQNTNVHDYNQTAYHGMGQNNYEMYKNNSENVNVENKNDSNYTTLMTMPYQPNNKLQSVENDENWFSQNTLLNLDHSDQTTQDAADTRSQASEPLTESNTAETADNFGELIKKTMVESVTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -