Tvar006418.1
Basic Information
- Insect
- Trilocha varians
- Gene Symbol
- -
- Assembly
- GCA_030269945.2
- Location
- AP028263.1:4574322-4578856[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.6e-06 0.0066 17.2 0.2 3 45 19 84 17 85 0.91 2 3 0.18 2.6e+02 2.5 0.1 5 31 179 222 176 238 0.65 3 3 2.4 3.5e+03 -1.1 0.0 3 18 335 350 334 383 0.73
Sequence Information
- Coding Sequence
- atggACGAAGATAATTTAGACGATTCCTTATCATTTacACGATTCCGAAGTCCAACCTTCACCAAAgaggaaatattattattactagatTTAATTGAGAAGCATAAAGATGATTTACTCATTAAATCAATGAGTTCCGCAGTATGCCGAACCAAAGAGATTATTTGGTTAAAAATAACGAAAGAACTTAACAAGCTTGATCCAAATCGGAAGAGAAGTACAGAAAGTATTAAAATCAAATGGGACAATCTAAAGAAAATTGTAAGAAAgctaacaaataatttattggaTTTGGAAAGTCATGAACTAGATGAAGTCAACAGTCGAGTTTTAATGTTGATGTGTGAAGCAGAGAATAAAACCAAACATTTGAACCATGATTCAACATTAAAATGTTTCGATGATCAAAACAGTGCAACACAAAATGAAACTTTAGTTTTGGAAAAAACTGCAGATTTAGAAGATAATTGCAGTTATTTTGATGAGAATGATGATAATTCTGACATTTTCAGATCACACCGAAGTCCTGGTTTTAAGAAAAAGGAAATAGATATATTAATATCATTAGTTACAAAACATCAGAATATAATTATGGATAAATGCACAAAATCATTTGCTAATGAAGCTAAAGAAAAGGTTTGGGCGTTGGTATGTAAACAGTTTAATGCACAAACAGATACACATAGAAAAGCCATTCAATTGAGGACTAAATGGGATCATTTAAAAGCCGTTTCGAAAAAATACAAGGATAAGATGAGGAGTGGTCACCAAGAACAAGATGAGACTTTAGAAAAAGTTTATGAATTAATTGATTCCCATGAAAATAAAGATAATACTATTTCTACTGAATTACAATGCAATTATGATGATATGGACATCAATGAAACCGATAGTGGACTTCCAAATGAACTTGGTTTTGAAGACAGCCTTTCTGAAGatactTATGATGAAAATGATAATGATTATGAAACTGAAATGAGGGAATGTAATGAATATAACACAAAATTCAGTCCTCGAGAATGTGCTCTGCTATTGCACTGTgttaaacaagaaaataaattgatgAAAACTCCAGAATCTCAACCACACTCTTTGAAACGTCGGGCTTGGATCAGGataACCAAATCCTATAACAGACTTAGTCCTGTAAAGCGACCCACGAAGACAttgatgaaaaaatttaaatctctgaaaaaacttaaaaaaagcaTACCATACAAGCGTTCAATTACAAAACTGTATAAAAATCAtcatagaaagaaaagtgaattaGAAGAGCCCATTATAAAAGAAGAAGCTTCAGAAAATGATGACACAGATGGCGCCGACGATTCGATTAGTATGAAAGATGAACAAAACTATTCAAATGATCTCAAAGAATTCGATCCACTGTCGGCTGTGCTCAATACAGATTCTGGCTTAGaTGAAATATCCCAGTATGAAGACAAAGAAGTCATCAGATTAAAAATAGAATTGTTGAATTACAAGAAAGAAACAGCTAAGTTGGAAAGGAAGAGGATAGAGAATGCCATAGAGTCTGACACCCTGGAAGCGTCGCTGCGCCTGCGCgcggcgcggctggaggcgGTGGCCGCGGCCATGAGGCTGCCCCCCGCGCACCCCGCGCTCCTCTACACGCCCGAGGAGGCGCGCGCACAGGAGTACATACTGCAGTATCAAGACTTGTGA
- Protein Sequence
- MDEDNLDDSLSFTRFRSPTFTKEEILLLLDLIEKHKDDLLIKSMSSAVCRTKEIIWLKITKELNKLDPNRKRSTESIKIKWDNLKKIVRKLTNNLLDLESHELDEVNSRVLMLMCEAENKTKHLNHDSTLKCFDDQNSATQNETLVLEKTADLEDNCSYFDENDDNSDIFRSHRSPGFKKKEIDILISLVTKHQNIIMDKCTKSFANEAKEKVWALVCKQFNAQTDTHRKAIQLRTKWDHLKAVSKKYKDKMRSGHQEQDETLEKVYELIDSHENKDNTISTELQCNYDDMDINETDSGLPNELGFEDSLSEDTYDENDNDYETEMRECNEYNTKFSPRECALLLHCVKQENKLMKTPESQPHSLKRRAWIRITKSYNRLSPVKRPTKTLMKKFKSLKKLKKSIPYKRSITKLYKNHHRKKSELEEPIIKEEASENDDTDGADDSISMKDEQNYSNDLKEFDPLSAVLNTDSGLDEISQYEDKEVIRLKIELLNYKKETAKLERKRIENAIESDTLEASLRLRAARLEAVAAAMRLPPAHPALLYTPEEARAQEYILQYQDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -