Tvar018308.2
Basic Information
- Insect
- Trilocha varians
- Gene Symbol
- SMARCC2_1
- Assembly
- GCA_030269945.2
- Location
- AP028277.1:5586949-5597271[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-14 4e-11 43.5 0.1 3 44 529 570 527 572 0.95
Sequence Information
- Coding Sequence
- ATGAAAGTGTTCATGGACATGAAGCCGGGCGGTTCACTGTGCACGGTGTTCGCCACCATGTTCCGTTTCAAGTCGGAGCAGCGGTGGCGTAAATTCGACTTCCAGGTCGGTAAGAACCCTTCGCGCAAAGATCTGAACGTGCAAATGATGATGGAGATCGAGTCGTCTTTGCTCGGTTCTGACGTCATCCGTTCCCCTTGCGTTTATATACGGCCGGAGGTTGATAAGGCAACCGCTAACAAAGTTAAAGACATCGTGGTTAACCACCAGGGAGAAATATGTGaGGACGAAGAGGACGCGACTCACATAATATACCCAACGCTGGACCCTCACGAGGACGAATACGCGCGGCCCGTGTTCAAGCGCGGGAACCACGTGCTGGTACACTGGTACTATCTGCCCGACAGTCACGATACTTGGGCGCAGACTGAACTACCGGTGGACGTCCCGGAGTCAGTAAACTGGGAGTGTAACCGCGTCGAGCCGTGGCGCGTCACGGCGTCCTGGGCGCTCGACCTGCCGCAGTACAACGAGTGGATGAACGAGGAGGACTACGAGGTCGACTCGCACGGGAAGAAAAAGAACCACAAGCTACGTCTCTCTGTGGACGACTTGATCCCCGGCGCCGAGCCGTCAAGTAAAAGCAAGAAAGGAAGCAAGAGGAAGCGATCACCGTCACCGCCGCCGCAGAAACACAGCAAAAGGAAGAGTCGAGTTACAAAGCGTCGCGAGAATGACGTGGATGAGGAGGAAGACGCCGCGTCACGTGACAACACTGACGTCACACCCGCACCTGAACCTGAGAAACAGCCAGAACCCGCCCCGGTGTCCAGCGCGGCGAGTACCAGCGCCAGTGGCAGTGCTGGCGCGAGTACTGGCGCCAGTGCGGCGGACAGCGCGCCCGCAGTGGAGGCTCCGCCCACTCCCGCGCCGCATCCCGACTCGCACGACGACTCGCAAGGGAAACACTCGGATTCTAATACACAGGAAATGCTAACTAAAGAAGAATTAGAAGACAATGTGACGGATCAAACTCATCACATCGTGGTTCCATCGTACTCCGCCTGGTTCGACTACAACTCCATACACATGATCGAGAAGCGAGCATTACCCGAGTTCTTCAATGGAAAGAATAAGTCCAAGACACCTGAAATTTATTTAGCATACAGAAACTTCATGATCGACACATACCGTTTGAATCCCACTGAGTACCTCACGAGCACCGCGTGTCGCCGCAACCTGGCCGGCGACGTGTGCGCCATCATGAGAGTACACGGCTTCCTCGAACAGTGGGGACTTGTTAATTATCAGCTGGAGACTGATTCTCGTCCGACGGCGATGGGTCCGCCTCCCACCTCACACTTCCACGTGCTCTCCGACACGCCGTCCGGCCTGCAGCCGCTCATCACGAGACCCGCGCAACCCAGACCAGCTGAAAATGTTCCTAAGTTGGAGCCAGGTTTACCGAACGGCGCTGAGAGTGGAGTTCCCCCCACCGCGCCCCTCAAGGTGGAGCCGGTGCCCGAACTACCATCTGCGCCGGGGATCAAACTAGATCAGTACCGCGGCGGTCAGCGTGGTCGCGAGTGGACGGACCAGGAGACACTGCTGCTGCTGGAGGGGCTGGAGCTGCACCGCGATGACTGGAACCGAGTCGCAGCACACGTCGGCACCAGGACACAGGACGAGTGTATCCTGCACTTCCTGAGACTGCCCATTGAAGAACCTTATTTAGATGAACCAGGTTCAGGTGGAGTCCTGGGTCCATTAGCGTACCAGCCCATTCCGTTCAGCAAGGCTGGTAACCCCGTCATGAGCACCGTGGCCTTCCTCGCTTCAGTGGTGGACCCTCGCATCGCGGCCAAGGCTACTAAGGCAGCTATGGACGAATTTGCTGCTATTaagGACGAGGTCCCGGCAGCCATGATGGAGGCGCATGTGAAGGCGGCCGCCGCGCACGGCGCGCCCGCCGCGCTCGCCGCCACCGGCATCGCCGGCACCGCGCCCGAACTGTCACCCACCGGTGAGAAGAAAGAGGGCAGTTCTGAAGTGAAGAACGAGCCGATGGAAGTGGAAGAAGGAGATGCTAAAGTAAAAGAGGAGCCTGCTGAACAACCTGCTGCTGAAGAAAAGGAAACCAAGGAAGAACCATCATCACCACCACCGCCCGAAGCCCCGGCAGCAGTGGACGCGAAGCTGCAGTCCGCGGCGGCGGCCTCCCTCGCCGCGGCGGCCGTCAAGGCCAAGCATCTCGCCGGAGTCGAGGAACGGAAGATCAAGTCCCTCGTCGCGCTGCTCGTCGAGACGCAGATGAAGAAACTGGAGATCAAGCTCCGGCACTTCGAGGAATTAGAGGCCACTATGGAGAGGGAGAGAGAAgGTCTCGAATACCAACGCCAGCAGTTAATACAAGAACGACAACAATTCCACTTGGAACAACTCAAAGCAGCTGAATTCAGATCCAAACATCAAGCTCATCAaagGTTACAAGCTGAGAATGCAGGTTTAGCGGCGGCTCCCAACGCAGAACAACAACCCGTACCCGAAGCGCAGCCGCCGCCGCAACCCACGCACGCGTAA
- Protein Sequence
- MKVFMDMKPGGSLCTVFATMFRFKSEQRWRKFDFQVGKNPSRKDLNVQMMMEIESSLLGSDVIRSPCVYIRPEVDKATANKVKDIVVNHQGEICEDEEDATHIIYPTLDPHEDEYARPVFKRGNHVLVHWYYLPDSHDTWAQTELPVDVPESVNWECNRVEPWRVTASWALDLPQYNEWMNEEDYEVDSHGKKKNHKLRLSVDDLIPGAEPSSKSKKGSKRKRSPSPPPQKHSKRKSRVTKRRENDVDEEEDAASRDNTDVTPAPEPEKQPEPAPVSSAASTSASGSAGASTGASAADSAPAVEAPPTPAPHPDSHDDSQGKHSDSNTQEMLTKEELEDNVTDQTHHIVVPSYSAWFDYNSIHMIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHGFLEQWGLVNYQLETDSRPTAMGPPPTSHFHVLSDTPSGLQPLITRPAQPRPAENVPKLEPGLPNGAESGVPPTAPLKVEPVPELPSAPGIKLDQYRGGQRGREWTDQETLLLLEGLELHRDDWNRVAAHVGTRTQDECILHFLRLPIEEPYLDEPGSGGVLGPLAYQPIPFSKAGNPVMSTVAFLASVVDPRIAAKATKAAMDEFAAIKDEVPAAMMEAHVKAAAAHGAPAALAATGIAGTAPELSPTGEKKEGSSEVKNEPMEVEEGDAKVKEEPAEQPAAEEKETKEEPSSPPPPEAPAAVDAKLQSAAAASLAAAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRSKHQAHQRLQAENAGLAAAPNAEQQPVPEAQPPPQPTHA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00187109; iTF_00236582; iTF_00235810;
- 90% Identity
- iTF_00236582; iTF_00235810;
- 80% Identity
- -