Tvar019455.1
Basic Information
- Insect
- Trilocha varians
- Gene Symbol
- rcor2_1
- Assembly
- GCA_030269945.2
- Location
- AP028278.1:4509282-4513722[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-09 1.5e-06 28.9 0.0 3 46 132 175 130 175 0.97 2 2 8.6e-12 1.2e-08 35.5 0.0 3 46 371 414 369 414 0.97
Sequence Information
- Coding Sequence
- ATGGTTTTAGCAGAAAGAAGTAGTGATGTTCGGAACGGGAAGCGATCAAGGGGGCCAAGCCCCAATGATCATGGAAGTCCAGATTCCAGTTCGGATGAAGAAAATGTAGTACCGTTTGCAGCCGAAAAGATTCGGGTCGGTCGGGACTATCAAGCCGTGTGCCCAGAATTAGAACCAGTTGAAGCCAGGAGACCTGACTTGATATCTGATAGAGCCCTTCTTGTTTGGTCGCCAACTACTGACATAGCAGACATTAAATTGGATGAATATATTACAACAGCTAAAGAGAAGTATGGCTATAATGGTGAACAAGCCCTTGGTATGCTTTTCTGGCACAAACATGACCTTAATCGTGCATCAATGGATCTTGCTAACTTCACACCCTTTCCTGATGAGTGGACAGTTGAAGATAAGGTGCTATTTGAACAAGCTTTTCAATTTCATGGTAAAAGCTTTCATAGGATCCGTCAAATGCTGCCAGATAAGTCCATTGCATCATTAGTGAAATATTATTACTCATGGAAGAAAACCAGAGCTCGTACATCTTTATTAGATGTCAGTGAGGTCAGGAATGCCACAAGTTCAGGAACTGGAAAAAAGGAGTCAGGAGCATCATCAGAACCTGGTGGATCAGACAAAGAATCAGATAATGATGAAAAGGGCGAGGGCGGCGCAGAGGGCGCGGGCAAGTGGTGCACCGTGTGCGGCATACAGTGCACTCGCACCACGCAATACAACTCCCACAAGTTGTGTCAGGCATGCCTCGTGCACGCCAGACGCACGGGAACGATGAGACCGTTGTGCGGGCCCTCGGGCAAACGCGGCCCCGGCGTTAAGCAACAGCGGTTCAAACATCGCCTGCCGCCCGGCATATACATCAATCACGACGATCTCGTCGCCATGGCCACCGGCCCGCAGCCCGGGGACGCCTCGCAGCCCGGACACCTCAACCTGGGCGAGGCCATGCTCAAAGCTATGGACAGACAAATTATTACGATGAGAAGACAActacaacaaaataaacagCAATTGAGTGCATTGAAACGCAAAGTTGGTGACACTGGAGTAGAAGATTTTCGTCCTGGCGAACCACCGGCAAAGATTAATTCACGTTGGACTAATGACGAATTACTTATGGCCGTTACAGCAGTAAGAAAATATGGAAGGGATTTCCAAGCCATAGCGGAGACGCTCGGCACCAAGACGGAGGCGCACGTGCGATCGTTCTTCATATCGTACCGCCGCCGATACAACCTGGAGGCCGTGGTGCGGGAACACGAAGCGGAACGTGGAAACGCGCATCACATTCAAGCTGGCACAACAAGTACTGAATCTGAAACAGCTGACAGTTCCAATGCCAATAATGGCACTGCATCACCACAAACCACTGCAAAAGATGAGAAAATGGAAGTAGACAGTGAGGGCGTAGCTCTGGGCGCTTCGGCCGAACAAGGCGGGCCTCCCACCACACCTCCCAAGCCTAAATCATCAAAGTGA
- Protein Sequence
- MVLAERSSDVRNGKRSRGPSPNDHGSPDSSSDEENVVPFAAEKIRVGRDYQAVCPELEPVEARRPDLISDRALLVWSPTTDIADIKLDEYITTAKEKYGYNGEQALGMLFWHKHDLNRASMDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRARTSLLDVSEVRNATSSGTGKKESGASSEPGGSDKESDNDEKGEGGAEGAGKWCTVCGIQCTRTTQYNSHKLCQACLVHARRTGTMRPLCGPSGKRGPGVKQQRFKHRLPPGIYINHDDLVAMATGPQPGDASQPGHLNLGEAMLKAMDRQIITMRRQLQQNKQQLSALKRKVGDTGVEDFRPGEPPAKINSRWTNDELLMAVTAVRKYGRDFQAIAETLGTKTEAHVRSFFISYRRRYNLEAVVREHEAERGNAHHIQAGTTSTESETADSSNANNGTASPQTTAKDEKMEVDSEGVALGASAEQGGPPTTPPKPKSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00018116;
- 90% Identity
- -
- 80% Identity
- -