Tvar022266.1
Basic Information
- Insect
- Trilocha varians
- Gene Symbol
- -
- Assembly
- GCA_030269945.2
- Location
- AP028281.1:1052919-1064133[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-10 9.6e-07 29.8 0.6 3 89 217 287 215 287 0.87 2 2 9.4 2.7e+04 -3.7 0.0 25 35 677 687 668 687 0.77
Sequence Information
- Coding Sequence
- ATGGTatatcgaaatGATGAAGTCCTAGCTATCAACGACAAGGTAGTCCTTCGGGCCGAAGACCTCCTCACTTGGATTAGCGATGGAGCGAGCTGGCATTGGGGGCTGCGCGCTGTTTGGCGGGGAGCATGTGCCCCACCAGCTGACTTGAGGCACACACAGGCACTGCACCATACGAAGCTGGATTTCAGCGATGTGGAACGCGAGAAGAATAGTATAgCAGTAGACGCGGATAGTCCCGGTGTGGTGGTATTCTCCTACCCTCGCTATTGTCGGTATCGGGCTCTATTGTCCCGTCTCGAAGGCATCCAAGCTGACTGGCTGAGGGACTCTTTAGTGGCCGCGTTGGGAGGCTATGCTGCACCAACCAAGAACACCAGGATCTTGTATTGTAAGGACACCTTCGAATACTCCGAACTCGAGGGTCACGAGTTCGTGTGCAACCACCTCGCGCCTCGTCTGAAGGGTCGGCCCCGAGGCAGGAGACGACGAGCTCGATCCAGGTCCTCGCCATCACCTTCATCAAGGTCCAGCGACTCGGATCAGCAGCAGCCGGAATGTGAGCCCCCGCGCCGTCTCTCGCTCAGAAACGGCGCTGAGAGGCACAGCGAAGACGATGACTACAGGAAGGACGAAACTCCAGAAGACAAAGCATTCGTAGGACAGCTGAAACAATTCTATAAAGATAGGAATGAAAACTTCAAGGAACACGCTTTGAAAGATGTTAGCCCGCTATCTCTATACCGCGGCGTGGTCTCCCGCGGAGGATACCGCGCTGTGTGTCGCAGAGACCTGTGGGGTTTGTTACCAAGACCACAGCTCAGCAGACGGTATTATGAACGATACCTCCTACCATTCGAAAATCACGAGCGAAAACTAAACGGTCTGTCCGAAAGCATTCCCATAATAGAAGTAGCGGACTCCCCACAACATTCACCCgtaaaaaaacacgaaaaacGCTTACAAGTAGACGACGAGACAGGTGAAATGAAAGACCTGTCGATCATAAGTGGGCCCGAGTGTAGTGTTACCAACAAACCCGCTGAGGTTTTAAATAGGGAGTTTCTAGAATCTTTAGAAGATGTCAAAACTGCCAAGATAACCGTCAAGTCGCCTGAGAAGCTGCTTGATGAGAAAACTGTCAATAATAATGGACATACCGtaaaCACATTATTGAATCCCGAACAGAGTTTATTAAGAGCGCCTGTCACCACTGAGCCTATAGTCAACGGACACACGGACAACGGACAACAGAAATCTGTCCGTCCTTTAGGCAAGAGTTCATTACGAGCTGTCAGAGTGAAGCCGACACGaccgcacgcacacacacacagcgcTCCTCCATCGATATCAATGCGCACTGATTCAGCGTCCAGCTCCCCCCCAACGTTGGGCAACAACTTCGGTATACATCATCCCACACACAGACAGACCAACAGCGATGATGAGATTATAGAGgtTCCATACAAACCGAAAAGTCCAGAAATTATAGATTTAGATGAATATCCGGAAAGTCCGCAgacatttaaaaagaaaaaacttgagatattAAAAGAGAGAGGACTAGAGgtaacAGTTTTACCCGCAGTAACTTGGCCCGGGCCACTACTTGCGCCAGTAACTGTCCAACAACTAAACTATAATAGGCAAGCGCAGTTATACCAAATGTACAACATGATCCCCCCCAAAGTAATCCAATCGACTTCCCCTTTTGGCTCGGACGGGCCCCAAAAAACCGTCTACGGGAACCCCAAGGACCCCTTCATGCCCCCACCGCACGTCCTAAAAGGGACCCCCGTCAAACCCCAAAAGCCACAAACGGTCGAGCCAATTTTGGACCTAACTTGCACCAAGAAGCCATCCGTCGAAATTACGAGGGTAGATTCAGATTTGGAGATAACTTTGCTGAACGAGTGTAAGAAACCCCAGAAACGGGGTAACACGGGGAAGTTTTGCAAAACCGAGGAGCCTGTGACCAATTTTGGCTACAAGGATCCATATATGGCTTTTTATAACAGTTTAGCCGGCTCGGTGGACCAAAGACAGCTGGATTTGTATAGAGAGTTGGTTTCGAGTCAATTTAGGAGCTACGGTCTCATGAACATGGGTTCCGGACATGTACCGACCACTAAATAA
- Protein Sequence
- MVYRNDEVLAINDKVVLRAEDLLTWISDGASWHWGLRAVWRGACAPPADLRHTQALHHTKLDFSDVEREKNSIAVDADSPGVVVFSYPRYCRYRALLSRLEGIQADWLRDSLVAALGGYAAPTKNTRILYCKDTFEYSELEGHEFVCNHLAPRLKGRPRGRRRRARSRSSPSPSSRSSDSDQQQPECEPPRRLSLRNGAERHSEDDDYRKDETPEDKAFVGQLKQFYKDRNENFKEHALKDVSPLSLYRGVVSRGGYRAVCRRDLWGLLPRPQLSRRYYERYLLPFENHERKLNGLSESIPIIEVADSPQHSPVKKHEKRLQVDDETGEMKDLSIISGPECSVTNKPAEVLNREFLESLEDVKTAKITVKSPEKLLDEKTVNNNGHTVNTLLNPEQSLLRAPVTTEPIVNGHTDNGQQKSVRPLGKSSLRAVRVKPTRPHAHTHSAPPSISMRTDSASSSPPTLGNNFGIHHPTHRQTNSDDEIIEVPYKPKSPEIIDLDEYPESPQTFKKKKLEILKERGLEVTVLPAVTWPGPLLAPVTVQQLNYNRQAQLYQMYNMIPPKVIQSTSPFGSDGPQKTVYGNPKDPFMPPPHVLKGTPVKPQKPQTVEPILDLTCTKKPSVEITRVDSDLEITLLNECKKPQKRGNTGKFCKTEEPVTNFGYKDPYMAFYNSLAGSVDQRQLDLYRELVSSQFRSYGLMNMGSGHVPTTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -