Tvar005959.1
Basic Information
- Insect
- Trilocha varians
- Gene Symbol
- XBP1
- Assembly
- GCA_030269945.2
- Location
- AP028262.1:11170021-11171619[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8.2 1.2e+04 -3.0 0.0 18 24 32 38 29 40 0.70 2 4 1.2e-18 1.9e-15 57.3 13.6 2 64 44 106 44 107 0.96 3 4 0.0059 8.8 7.1 0.6 37 54 93 110 92 115 0.88 4 4 1.4 2.1e+03 -0.5 1.1 45 65 181 201 174 202 0.72
Sequence Information
- Coding Sequence
- ATGAGTGCCCCAATAATAATAACAGTGCCCAACAACTATTTGATGAACGACGAAGACTCTTCGGACGTGGTTCTGGATATGGCGTCGCCGTCTCCATCGAGAAAGCGGCGCCTAGACCATCTAACATGGGAGGAGAAAATGCAGAGGAAGAAACTAAAAAATCGCGTGGCAGCACAAACATCACGGGACAGAAAAAAGGCCAAAATGGATGAAATGGAAAGTCAAATCAGGGAGTTCAAAGAAATGAACGAGCGTCTCACAAGCGAGGTGCAGAGTCTGAAGGCTTTGAATGAGAGGCTGTTGAGTGAGAACACAGCGTTACGTGAAGCGGCAGCGGCGCAGAGCGTCCCGGGCGGGCAGAGACCAGCGGAGTCTACTCCTCAGCAGAAGGAGGCCCCCCCGGCGGCGGTCCGCGCGGCTCGCCTGCTCCTAACGATGTGTCTTCTATCGCAGACCTCCTCACGCAATTCGATTCAGATGAATACATCGACACCTTGCATCAACTTGCAGAGTCCCTCCTCCAAGAAATTGATGCAGGTGCTGCAGGAGAGACTCAACATGTCGAAAAAAACAGGAAAACTGGAGAACGCCCTAAAGGAGTTGAAGTGGTGGGGACCGCAACAGAGCAACTGGAACCCAGTGGAGGTGCTGTCGTAG
- Protein Sequence
- MSAPIIITVPNNYLMNDEDSSDVVLDMASPSPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESQIREFKEMNERLTSEVQSLKALNERLLSENTALREAAAAQSVPGGQRPAESTPQQKEAPPAAVRAARLLLTMCLLSQTSSRNSIQMNTSTPCINLQSPSSKKLMQVLQERLNMSKKTGKLENALKELKWWGPQQSNWNPVEVLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00235617;
- 90% Identity
- -
- 80% Identity
- -