Tnig001351.1
Basic Information
- Insect
- Trichopria nigra
- Gene Symbol
- GATA4
- Assembly
- GCA_030522945.1
- Location
- JAPYZR010000280.1:14075-17828[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-18 1.8e-14 54.6 3.2 1 34 29 61 29 63 0.97 2 2 3.2e-18 2.1e-14 54.3 1.4 1 34 83 115 83 117 0.97
Sequence Information
- Coding Sequence
- atgacgtcACTCGATGTACGAAACCATCTGAACGTAATGATAGTGCACAGCATCGAGGCCGAGTACTTTACCGAGGGTCGggagtgtgtgaattgcggggCAATTTCCACCCCGCTATGGCGCCGAGATGGGACGGGCCATTACCTCTGCAACGCCTGCGGACTTTACCACAAGATGAACGGAATGAATCGACCTCTGGTCAAACAGCCACGGCGTTTGacGGCATCGAAACGAACCGGCCTTATATGCAGCAATTGCGCGACTAGTCAAACGTCTTTATGGCGCCGCAATATTCATGGTGAAGCTGTGTGCAACGCTTGTGGACTTTATTTCAAACTTCACGCAATTCCCAGGCCACTGAATATGAAAAAGGACAACATCCAGACTCGCAAACGAAAGCCTAAAAATACCATGAAGACTTCCGACACGCCGTTAGTAGGGCCAACCAGTCAACGACCATTgaccaacaacaacaacaacaacatcaataataatattaaaatcgaGTCAGAATACCGGCAATTGGCTATGCCCCATGGAGGTAATGGAAGACAGGTGTACGAATGTCCCGTTTTCATAACGCAGCCGACATCCAACAGAATTTCATCAGCCCCCTATCGAGAAATGTCCATGTACTACGACATGcaacagcagcagcagcagcatcagCACGAGCAGTTGATAGAAAACCTATCGCCAAAGGTGGAATGCCCTTCGCCACCGTGTAATCGTTCGCCGACTTTGGTATCGGCAAATCACTCACCGGTCCATCATCACATGAATACCCCACATATCGTTAATCTGGGCAATTCGTCACCGGCTTCCGCAAACGGAAAGGTCATCCTTGAGACTAACCATCTGGATAGACCCACGACGGCAACGATATCCTAA
- Protein Sequence
- MTSLDVRNHLNVMIVHSIEAEYFTEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLTASKRTGLICSNCATSQTSLWRRNIHGEAVCNACGLYFKLHAIPRPLNMKKDNIQTRKRKPKNTMKTSDTPLVGPTSQRPLTNNNNNNINNNIKIESEYRQLAMPHGGNGRQVYECPVFITQPTSNRISSAPYREMSMYYDMQQQQQQHQHEQLIENLSPKVECPSPPCNRSPTLVSANHSPVHHHMNTPHIVNLGNSSPASANGKVILETNHLDRPTTATIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -