Tnig007114.1
Basic Information
- Insect
- Trichopria nigra
- Gene Symbol
- ZFHX3
- Assembly
- GCA_030522945.1
- Location
- JAPYZR010003105.1:7576-14811[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.24 51 6.1 0.1 2 23 204 226 203 226 0.91 2 16 0.00019 0.04 15.9 1.8 2 23 455 477 454 477 0.95 3 16 4.7e-05 0.0098 17.8 0.7 1 23 509 533 509 533 0.92 4 16 0.0069 1.5 11.0 0.4 1 22 591 612 591 615 0.91 5 16 6.6 1.4e+03 1.6 0.6 2 20 837 855 836 860 0.88 6 16 3.5 7.4e+02 2.4 1.5 1 23 884 908 884 908 0.91 7 16 0.29 62 5.8 0.1 2 23 997 1019 996 1019 0.95 8 16 0.047 10 8.3 0.3 3 23 1041 1062 1040 1062 0.95 9 16 0.00054 0.11 14.4 3.5 2 23 1124 1146 1124 1146 0.96 10 16 0.0034 0.72 11.9 1.3 1 23 1163 1185 1163 1185 0.97 11 16 0.00014 0.03 16.3 0.2 2 23 1192 1214 1191 1214 0.95 12 16 0.0048 1 11.5 3.2 1 23 1303 1327 1303 1327 0.91 13 16 0.0054 1.1 11.3 0.6 1 22 1347 1368 1347 1371 0.89 14 16 0.00067 0.14 14.2 0.1 1 23 1412 1436 1412 1436 0.93 15 16 0.044 9.4 8.4 1.1 1 21 1482 1502 1482 1503 0.94 16 16 0.16 34 6.6 2.0 2 19 1648 1665 1647 1670 0.91
Sequence Information
- Coding Sequence
- ATGAGTCCGGAGGAAGAGCGGGGCCGAGGGGGCGGGTCCCCAACGGCCGCAGGTGTTGCTCTTCATCAGACTCATCATCCTCGTAACGCTAGTCCACATTCCGGCACAGAACCTACAACAACTACAACCCCAATCTTAGATACAACAACCACTGTAACTGGTACTACTCCGTTAACGTTGTCCTTGCAACATGAGAGTTCCAGTTTAAGTCCGAGTCTTACGCCTGGGGGTGATGTAGAGAAATTCGATGGCAAAATCGTCTATAATCCCGACGGATCTGCTTATATTATTGAGGGTGAAAGTGAGCTCAGTGAAGATGATTCTCTTCCTGATGGTTGTATTGTGGATGGGCGGGGAGTGTCTGTTTCTCATTCTTCGGTATTTCCTCAAATTGCAAGCGCGTACTATGTATCGAGACTGTATGCTCATCAAGTTTATCAACAGCAGCAGGAGCAAAGGTCATCGTCGTTGCAACAAAATCCTGACCTTCCAGTCATGCATAGTTATCGTGTGATTAGCTACAGAAGTGCTGATGGCAGTAAACAACCCCCACCTGCTTCGACAGCGCCGCCTCCCCCGGCAATGTCCGTTCCGGTGAAGCCGATTCTCATGTGCTTCATCTGTAAATTGAGTTTTGGGTACGCGAAAAGTTTCGTTGCGCACGCTCAAGGCGAACATCAATTGACTCTGATGGAGGACGAACGGCAGATATTATCGCACTCGACAGCTTCTGCGATCATACAGTCAGTTGGGCGAGGGAAGCAACCCCTTGTCAGTTTCCTAGAACCTGTTGTTTGTCCGACCTCGCCGCAGCTATCGTCTGAGGAAACCCGACCTCAGCAAAAACGCCAAGACGAGTCTGTTGAATTGGAAATGTATACTACAACAAGTACACCGTCTAGTACTTCTTGCGTATCTGACAATCCTCAACAGCAACAAAAGTCATTATTAAACACAACCGTTTCTAACATAAATCATTCgcttgtatataataataatcagcagcagcaacagcagcaacagcagcagcagcagcagcagcagcaacagcaaaACCCTTGGTCTACGGTTCAAGTAAGTACGAATCCTTGGACGAAGACGCAAGACTCTGTTGCTATTCAGCATACTTCATCGCCACCTCCGATGTCTTCGAAAGCATCACCGACGTCATATGCAGCATTAGCACATCAACCTCCCAATTTTCTTACCGGAACCACAATTGGTGTATGCCCTGAACATATGCAAGGTAGGCCTAGTGGGGTCGAATGTCCGAAATGCGaacttattttaacaaatagtAGACTGGCAGGACCTGGAGGTCCTTTAGCGGGTATTCATAGTAGGAATTCgtgtaaaactttaaaatgcCCTAAGTGTAATTGGCATTATAAATATCAAGAGACATTGGAAATTCACATGAAGGAGAAACATCCCGATAGTGAAACGTCCTGTATTTATTGCATAGCGGGTCAGCCGCATCCTAGGCTAGCTCGGGGTGAAACGTACACGTGTGGTTATAAACCATATAGATGTGAAGTGTGTAACTATTCGACGACTACGAAAGGTAATCTCAGTATTCACATGCAGAgtgataaacatttaaataatatgcaGGAACTGCAGCAAGGCGGCGGCAGCGGTTCCGGCACTAATAACCCCCCATCGTCACAAGATTCCCCTATTCCAACGCGAAGCccgcatcatcatcatcaaactCGTAGTCCTCATTTAAGTAGCCAAACTATAAATCAAGGTAAACCGAAACCTATATTTCGATGTGATGTTTGTAATTACGAAACGAATGTTGCACGCAATTTAAGAATACACATGACAAGTGAGAAACATACGCACAATATGTTAGTACTACAACAAAACGTTAAGCATATGCAAACGTTGTCCGCTCTTCAAAATCACCAACAACAAACGCAGCATCAACATCAACAGCAGGTGCAGCAGCATCAGTTGGAACAACTTTTTCATCTTAGCGCGTTAGACAAGCCGCAGCACGCTGAGGCTGCGCTCGCTGATATGGCGTACAACCAAGCTCTTTTAATACAAATGATGACTGGAGGTCAGTTACCCACGCAATTACCTCCGGAAATCATTAGCGGTATGACGGATATCAGAATAGCAAATTTGGGCGGCGATGTCGGTCTTTCTCCAGACAGCATGGAGCCGCCACCAGAACCAGCAGATTTAGATCCATCGCATCTATACCATTGCTGTGTTTGTAACAATTTTGTCACCGATTCTCTTGAAGCTCTGGGTCACCACTTGGTTGCTGACAGAACGAGGACTCGAGAAGGTGACATCCTAAGTGTCGTTGCCGGGCACTTTATATGCAAATTATGTTCCTATAAAACGAATCTGAAAGCCAACTTCCAGCTTCATTGTAAGACGGATAAACATATACAGAGGCTGCAGCATGTTAACCATATAAAAGAGGGAGGAATACACAACGAATGGAAACTCAAATACCTTTCCTCGCCAACAAGCGCGCCTCAAATACGTTGCCATGCTTGTGATTATTATACGAACAGTGCTCATAAGCTCGCTCTTCACGCTGCTTCACCGCGACATGAAGCCGCTGCTCTCCTATTACGGCACCTTCTTGAAGCCAGTAGTAACCTGCAATCGGCAGGAAAGTTGTACCATTGCGCTCTGTGTGGATTCACTGCTAGACATCGATTGCCATTACTTCAACATGTGCGGTCCTTGACACATCTGCAGATGGAACAAATCCACCAATTACACAGAAGGAGTGGTGTACAAGGAAATGAATCTCCACATACAGACATTGGAGACGTTTTTCAAGTTATGCCAGACCCCGACTTGCCAACCCTACAACAGCCCAGTCCTACGCAAATGGCGTCCAATACCAACCATGaGAGGCGCGACGACGAAAGTGACTCCGGTAATGAGGTTAAGCAAGAAATAGACAACGAGCCAGAACCAGAACAAGATTTAGAGACCGAAACTGAGGAAATAAGCTGTCCTTACTGCACGTATCAACCGATTTCTCGAGAAGAGCTTACTCAGCACCTTCAGGTTGCTCATGTTCAAGATTCTTTGCAGAAAATGCAGGAAACCACGACGGAGGAAACAATACCAGATTTATTGTGTCCTTTGTGCCAAGACTCTTTTAAGGAGCGGACTAGTTTAGAAAAGCACGTAATGCAAATTCATTCAGTGAATGCCGATGGCTTACAGAGGCTGTTATTACTTGTGGATCAAAGTCATTGGTTGAACAATATTCCTCGAAACTCATCGACACCTTCCACAACTGTACAGTCTTCAGAGGCTGTATCAAAACGGAATCCAGATGAGGAAGGGAGCGAACAACTTACCGACGAGGCAGAAGAAGCAGCGAGGTGTACTATATGCGGTAAAGCGTGTCGTTCGTTAGAGGAATTACAACAACATCACAGAGAATCCCATGCCACTTCGACTCCCGTCTTAGCCGTAAGCGAAAAACATGTATACAAGTATAGATGCGGTCAATGCAGTTTAGCTTTTAAAactttagaaaaattacaacaGCATTCCCAATATCATGCGATTAGGGATGCGACTAAATGTGCACTGTGTGGTCGGTCTTTCCGTTCGGTTCAAGCACTTCAGAGGCATTTAGAATCGGCTCACACTGACTTACAAGAAGACGAGCTGGCGCAATATAAGCAAAGTCTTCTTCACGCACATCCCCTTTTACATGCGTTAACCGAAGAAGCTCTTCGTCGGCAGAGTGGATTAAGTTGCGAACAAGCTGGCGATGATGAGAGCAAGGGCGAAGACGATGAAAGTGACACGAGTGATTCTGTTCCAGTACACAAAGAACAGCAGCTTTTAGAAGATTATTTGAATAGTCAATCGATTGCTGAAGACTCGTACCACGATCCGGGAAGGAGGTTTAAATGCCACCGATGTAAAGTTGCATTCACAAGGCAAAGTTACCTTTCTGGACACAACAAAACACTTTTGCACCGTAAAGGAGAGAAAATGTCGTATCCTATGGAAAAGTACTTGGATCCAAACAGGCCCTACAAGTGTGACGTGTGCAAAGAGAGTTTCACGCAGAAGAATATCCTTCTTGTTCATTACAATAGTGTCAGCCATTTACATAAGTTAAAACGAGCTATGCAAGAACaaggtaataataatacactTATTTCTGTGATAACGCCCACTAGCCCTACAGATTCAAGCGAAAACCAACAGGATCAAGACAAGAAGCCATACAGGTGCAATATATGTAATGTGGCTTATTCTCAGGGTAGTACGTTGGATATTCATATGCGGAGCGTTTTACATCAGACGAGGGCCAGCAAAATACCCGACCTGGCTGCCAGCGGTCAACTAGATCTTGCACGTCCACTGATCGAGCAACCGTTGGCAAGCCCGAGCAGCCCTCCTAGCTCGAAACACGGGAACACAAACAATAGCATGTTTTGTTGTTCTCGATGTAACGCTCTCTTCGTTAATCAAGATCTTTTGACTAGTCATCAACAGCTTTACTGTATCTTTAGTAATCCACTCGCTCTTTTTCAACATTTAGCTGTTTCACAACAAGTTAATAATGCAATATCGGAAACGCCGCCTCCTCTATTAAGTGCTTGTGATTCTCATAAACTTACTCAGCAACTGACGACGCAGTCGCAGATACAAGCGACTCAAGACATTTTATCGCAGCCTCGGCATAAAACGTCTCAAATgtataaacatttacttgaaagttTCGGTTTCGATCTCGTGATGCAATTTAACGAAAATCATCAAAGGCGGCaaagaaaggaagaagaagCTGCTGCTGCTTTCCAAGCTCAACAAGAAGAGCAACAGAAGGAACAGCAGGAGCAAGCGTATGCCGCACATAGTACTCAGGAAAAGGAGCTGGATACAGAAGATACCGCGGAAGACGACGTCATTCCTGAACTGAAACGAAGTACGTGCCAGCATTGTAATAAAGAATTTAGTAGTGTATGGGTTCTTAAAGCACATTGCGAAGAAGTGCATCGAGATTTAGTTCCTCGTGAATTTTTAGAGAAATATGCGCAACAATTTAAATGTGAATATGAAAGGAAGACTGTTGTCGTTACTGCAGCTACGTCATCGTCGACGACTACGGCCCCCATCAGTACTACAGCCGCACCCACTCCTGTGCCAGACCAGAATGTAAGTAAAGATCcagaagaaaaaattaaggaaGAGGTAATCGAAAACAAAGATGTCGGTAGTCCAATTCCTGAAGCCACTTCAACAACTCCGGCGACTACGCCGGCTTTGAGTAATACCCCATTATCCAGTATTGACTCAACGACTCCAAGTGGCCCTGCTACTGTTTCGCCGCAAGTTgttcaacatcatcatcatcagcagcagcagcaacagcagcagcagcaacaacagcaacaacagcagcagcaacagcagcagcagcagcaagcACAATTAAATTTGGCTCAACTGACTGAAGTGCATGCTGCTTTGAATGCTATGGCTGCATCCCAATTGCAACAGCATATGCAACAATATCCAGGATTAATGATGAGTATGATGGGGCTTCCATTGAGTCTAAACGTACCCGCGCTAGCAGCCATGAACCTTCAACCGCCATTAGTACCGATGATGTTGCCGCCACCACCATTCGACAGTTCAGGTGGATACTCTCCGATGAATCCTCAATCCGATATACTCGCTAAACAGCATCTAGTATTACAGCAACAACAAGCTGCAGTGatCATAAGATCAGAGTAG
- Protein Sequence
- MSPEEERGRGGGSPTAAGVALHQTHHPRNASPHSGTEPTTTTTPILDTTTTVTGTTPLTLSLQHESSSLSPSLTPGGDVEKFDGKIVYNPDGSAYIIEGESELSEDDSLPDGCIVDGRGVSVSHSSVFPQIASAYYVSRLYAHQVYQQQQEQRSSSLQQNPDLPVMHSYRVISYRSADGSKQPPPASTAPPPPAMSVPVKPILMCFICKLSFGYAKSFVAHAQGEHQLTLMEDERQILSHSTASAIIQSVGRGKQPLVSFLEPVVCPTSPQLSSEETRPQQKRQDESVELEMYTTTSTPSSTSCVSDNPQQQQKSLLNTTVSNINHSLVYNNNQQQQQQQQQQQQQQQQQQNPWSTVQVSTNPWTKTQDSVAIQHTSSPPPMSSKASPTSYAALAHQPPNFLTGTTIGVCPEHMQGRPSGVECPKCELILTNSRLAGPGGPLAGIHSRNSCKTLKCPKCNWHYKYQETLEIHMKEKHPDSETSCIYCIAGQPHPRLARGETYTCGYKPYRCEVCNYSTTTKGNLSIHMQSDKHLNNMQELQQGGGSGSGTNNPPSSQDSPIPTRSPHHHHQTRSPHLSSQTINQGKPKPIFRCDVCNYETNVARNLRIHMTSEKHTHNMLVLQQNVKHMQTLSALQNHQQQTQHQHQQQVQQHQLEQLFHLSALDKPQHAEAALADMAYNQALLIQMMTGGQLPTQLPPEIISGMTDIRIANLGGDVGLSPDSMEPPPEPADLDPSHLYHCCVCNNFVTDSLEALGHHLVADRTRTREGDILSVVAGHFICKLCSYKTNLKANFQLHCKTDKHIQRLQHVNHIKEGGIHNEWKLKYLSSPTSAPQIRCHACDYYTNSAHKLALHAASPRHEAAALLLRHLLEASSNLQSAGKLYHCALCGFTARHRLPLLQHVRSLTHLQMEQIHQLHRRSGVQGNESPHTDIGDVFQVMPDPDLPTLQQPSPTQMASNTNHERRDDESDSGNEVKQEIDNEPEPEQDLETETEEISCPYCTYQPISREELTQHLQVAHVQDSLQKMQETTTEETIPDLLCPLCQDSFKERTSLEKHVMQIHSVNADGLQRLLLLVDQSHWLNNIPRNSSTPSTTVQSSEAVSKRNPDEEGSEQLTDEAEEAARCTICGKACRSLEELQQHHRESHATSTPVLAVSEKHVYKYRCGQCSLAFKTLEKLQQHSQYHAIRDATKCALCGRSFRSVQALQRHLESAHTDLQEDELAQYKQSLLHAHPLLHALTEEALRRQSGLSCEQAGDDESKGEDDESDTSDSVPVHKEQQLLEDYLNSQSIAEDSYHDPGRRFKCHRCKVAFTRQSYLSGHNKTLLHRKGEKMSYPMEKYLDPNRPYKCDVCKESFTQKNILLVHYNSVSHLHKLKRAMQEQGNNNTLISVITPTSPTDSSENQQDQDKKPYRCNICNVAYSQGSTLDIHMRSVLHQTRASKIPDLAASGQLDLARPLIEQPLASPSSPPSSKHGNTNNSMFCCSRCNALFVNQDLLTSHQQLYCIFSNPLALFQHLAVSQQVNNAISETPPPLLSACDSHKLTQQLTTQSQIQATQDILSQPRHKTSQMYKHLLESFGFDLVMQFNENHQRRQRKEEEAAAAFQAQQEEQQKEQQEQAYAAHSTQEKELDTEDTAEDDVIPELKRSTCQHCNKEFSSVWVLKAHCEEVHRDLVPREFLEKYAQQFKCEYERKTVVVTAATSSSTTTAPISTTAAPTPVPDQNVSKDPEEKIKEEVIENKDVGSPIPEATSTTPATTPALSNTPLSSIDSTTPSGPATVSPQVVQHHHHQQQQQQQQQQQQQQQQQQQQQQQQAQLNLAQLTEVHAALNAMAASQLQQHMQQYPGLMMSMMGLPLSLNVPALAAMNLQPPLVPMMLPPPPFDSSGGYSPMNPQSDILAKQHLVLQQQQAAVIIRSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -