Tnig004560.1
Basic Information
- Insect
- Trichopria nigra
- Gene Symbol
- CAMTA2
- Assembly
- GCA_030522945.1
- Location
- JAPYZR010001575.1:8135-19294[+]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-43 6.3e-39 133.8 0.8 11 116 2 105 1 105 0.98 2 2 1 2.6e+04 -3.6 0.8 23 39 256 272 247 286 0.56
Sequence Information
- Coding Sequence
- ATGGAAATCGCAGCAATTTTGATCAGCTTTCAGCGACACATGGAATGGCAGAGTCGGGAAGTAAAGGTACGACCCCGAAGTGGCTCAATGCTGCTATATTCGAGGAAGAAGGTTCGATATCGACGCGACGGTTATTGCTGGAAAAAGCGAAAAGATGGCAAGACCACACGAGAAGACCATATGAAGCTAAAGGTTCAAGGCGTCGAGTGTATTTACGGTTGCTATGTGCACTCCGCGATTCTTCCGACGTTCCATCGGCGTTGCTACTGGCTGCTTCAAAATCCAGACGTCGTCCTTGTCCACTATCTAAACGTTCCTTATCCTGACGGCGATGCCAAGCTTGCTGCTCTGCCGCCGTGTCTGGCCCTGCCGCCGGACAAAAAGGAATGGACGCGAGACGAATTGGCATCGCAGCTCAGACCAATGTTCCTCGGTGGAGATGACGATCCGAGTAATTCTCATCTTGGCCAACATTCGAATCATCCCATTGATATGATCGTTTCGCAGTTGCTGGACAGGCAGAGGGCGTCTTCGACCACGTCGACAACCGGCCCACAGCTTGCACCGCGGAGACTTACTCCTGACAAtcagGTCTCATCGACTACCGGAGCTCAACAACCGAGCACTACGGCGGCGGCCGCTCCGCGCGTTTACTCGAGACATTCCCACTCGACTCAGAGCCAACAGCCGGCTCCTTTAGTTTTAAGTTTACAACAAATACAAGGCGGAGGGGGCCTCCTCATCCTTAACAGTCAGCCATATCATCAtcaacagcagcaacagcagcagtcCCAACAGCcccaacaacaacaacagcaaacccagcagcaacagcaacaacaacaagCACCAGTCGAGATGCAACAGGTTTCTGATCATCAGCAGATCATCCAGCAGACGAGCGTCGAACATGAACATCAGACACACCAAGAGGCTGACACGAAAGACTTTAAGGAAAGCATCGATCGATCGCTTGCGTCGGCTGGGACGGGTCCGGGCACCGTAACAGATTTCGCGGAAACGTTGGACCTTAGTCAGGAAGACATACAGCGTACTTTATCAGCCAATATGGTCCATTCGACGCCATCGCCGTCGCCGGCCGATAATAGCATCATGAATCCGATGGACTTCATTGACTCCTCCGACGATGTTCTCGTTAATTTTGACGCGTTCGACATGTTCAGCGATTTGCCAGAGCTCCAGGACTTCGACACAGAACCCGAGAACAAGACTGAAGTTCGCGTTCCCGAAAGTGGGGGATGTCAGCCGGGCGCGACCGTCCACATTGCTGAGTATAGCCCGGAGTGGAGTTACACCGAGGGTGGTGTTAAGGTTTTAGTAGCCGGTCCCTGGACAGGAGGGAGTGGTTCTCACTCGTACTCGGTTCTTTTCGACACTGAACCCGTGGAAGCCTGTCTAGTGCAACCAGGAGTTCTGCGCTGTCGTTGCCCGGCGCATGCACCGGGCATAGCCTCTCTCCAGGTTGCCTGCGATGGATTCGTCGTTTCGGACAGCGTAGCCTTTGAGTATCGACGAGCACCAACGAGCCAACCAAGTCCGGAGAAGGCGCTTCTCGACCGCCTGGCAGACGTGGAAACTCGCCTCCAGGGACCTGGGTCTCCATCACCTTCGGCGCATCTCGAAGAACGACTAGTCGCTTATTGCCAGGATGCCGTAGTAAGACCTTGGCGTAACGGAGCCGAGCCTCTGCAATCGGGAGGTCCAACTCTGTTGCACCTGGCTGCGGGATTGGGATACTCTCGGCTTGCTTGCGCACTTTTACATTGGAGAGCCGAAAACCCTAGCACCATCCTGGACGCAGAAGTGGACGCTCTCAAGCAAGATGCTGCGGGATTAACTCCCCTCGCCTGGGCCTGTGCTGCGGGACATGCAGATACTGCTAGAATACTTTACCGATGGAACGCAATGGGGCTGCGCGTGAGAGATTGTCAGAACCGGAGCGCGACCGAACTGGCCGCACAGAACGGGCACACGGCGATCGCCGAAGAGCTCAATCGCTTGGAAGCTCAGAGGCAGGACGAGAGGCTTTTCTTGAGACCAGCCAGCCCGAGTCCTAGGAGGCCTTCCCAAGACAGTGGTCTCGAGTTGGCGCTGTGTGATTCAcaattcctggacaacatgggTTTGTTGCAAGAGGATGAAACGACGTTAGACCTCGGCCAGCAGGGTATGGACGACGTTCCGTCCCCAAGAAAGACTGTAGGGGAGGAGGACGTGAGGGTTTTGACCTTGGCCGAGCAAATTATAGCCGCGCTACCCGAGAGGATCAAGAGAGAGGAGGGTGACGCACCTTCACCGGCCTCGCCGCCTCCGCCACCGCCGTTTCCACCGTTCGAGGATGCCTTGATGGAACAAATGGTATGA
- Protein Sequence
- MEIAAILISFQRHMEWQSREVKVRPRSGSMLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGVECIYGCYVHSAILPTFHRRCYWLLQNPDVVLVHYLNVPYPDGDAKLAALPPCLALPPDKKEWTRDELASQLRPMFLGGDDDPSNSHLGQHSNHPIDMIVSQLLDRQRASSTTSTTGPQLAPRRLTPDNQVSSTTGAQQPSTTAAAAPRVYSRHSHSTQSQQPAPLVLSLQQIQGGGGLLILNSQPYHHQQQQQQQSQQPQQQQQQTQQQQQQQQAPVEMQQVSDHQQIIQQTSVEHEHQTHQEADTKDFKESIDRSLASAGTGPGTVTDFAETLDLSQEDIQRTLSANMVHSTPSPSPADNSIMNPMDFIDSSDDVLVNFDAFDMFSDLPELQDFDTEPENKTEVRVPESGGCQPGATVHIAEYSPEWSYTEGGVKVLVAGPWTGGSGSHSYSVLFDTEPVEACLVQPGVLRCRCPAHAPGIASLQVACDGFVVSDSVAFEYRRAPTSQPSPEKALLDRLADVETRLQGPGSPSPSAHLEERLVAYCQDAVVRPWRNGAEPLQSGGPTLLHLAAGLGYSRLACALLHWRAENPSTILDAEVDALKQDAAGLTPLAWACAAGHADTARILYRWNAMGLRVRDCQNRSATELAAQNGHTAIAEELNRLEAQRQDERLFLRPASPSPRRPSQDSGLELALCDSQFLDNMGLLQEDETTLDLGQQGMDDVPSPRKTVGEEDVRVLTLAEQIIAALPERIKREEGDAPSPASPPPPPPFPPFEDALMEQMV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -