Tnig027510.1
Basic Information
- Insect
- Trichopria nigra
- Gene Symbol
- RCOR3
- Assembly
- GCA_030522945.1
- Location
- JAPYZR010023616.1:1-5843[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9e-10 2.4e-06 29.1 0.0 3 46 86 129 84 129 0.97 2 3 5.6 1.5e+04 -2.3 0.9 37 44 233 240 231 241 0.86 3 3 2.1e-13 5.6e-10 40.7 0.0 3 46 331 374 330 374 0.98
Sequence Information
- Coding Sequence
- atgcTGGCGTGTTGTGaaagagaaaagaaaataatttttgtttcagagCGCCGACTCGATCAGTGCCCAGACAAGGCTCTATTAGTTTGGTCACCAACTACCGATATTCCAGATCAGAAACTGGACGAGTATATAATACTTGCGAAAGAGAAATACGGTTATAACGGAGAGCAGGCACTAGGAATGCTCTTTTGGCATAAACACAATCTGGAGCGGGCAGTACTCGATTTGGCGAATTTTACGCCGTTCCCCGACGAATGGACTGTAGAAGACAAAGTTTTGTTTGAACAAGCCTTTCAGTTCCACGGAAAAAGTTTTCATCGGATACGGCAAATGCTACCTGACAAGCCCATTGCGAGCTTGGTCAAGTATTACTATAATTGGAAGAAGACCCGTTCCAGGATATCGCTCATGGACAGAATCGCCAGGAAATTGAACACGGGAAAAGATGGCGAAAACGGTAGCGAAAATGGAAGCGAGCAGGGGACAAATTCTGAAAGTGATTCTGAGGAAAAGAAATGGACGATCCATCGCGGAATACGCCGTGGCAAGATCCAAGCCGCACCAGGGAGCCAAGGCGCTGATGCCAAGGCCTCATCCGACTCGGAAAACCTTCCTCAGGTTCAGGCCTCGTGTAGCAACTGCGGCGTTGCTTGTCATAGCGTCCGTTCTACGCCGAAAGGACACGCGTGTAGTAGCTGCTATCAGCATTGGAGgcgcacCGGTGTTGCAAGGCCACTGAGTTCTATGCCGGGCCGTTCGAACAAACGAAAACCACCCCGTGGGCTGGTCGTGAATCACGACGATTTGGCAGCGCTAGCTGGCCAGCCGAACCAAGCCAACAACAGTCTTCAAGCTATTGACACTGAAATTGTTAGCCTCAAACGCCAAatTCAAACAAATAAGCAACAAGTTAGTGggctaaaaagaaaaacttgcgACGGAATTGACGATTTACGGCCTCCAGAAGTTTCCAATCGCATTAACGCTCGTTGGACTAACGAAGAATTGCTTATAGCGGTACAGGGTGTCCGCAAATTTGGCAAAGATTTTGCAGCAATTGCTGATGTCATCGGTACTAAAACCGAGGCGCATGTGCGATCtttctttgttaattataaaCGAAGATACAATCTTGAAGGCGTACTGAAAGAATACGAAACAGAGCACGGTCCGATTCTTATCGACGATGAGAAGGATGAAAAG
- Protein Sequence
- MLACCEREKKIIFVSERRLDQCPDKALLVWSPTTDIPDQKLDEYIILAKEKYGYNGEQALGMLFWHKHNLERAVLDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKPIASLVKYYYNWKKTRSRISLMDRIARKLNTGKDGENGSENGSEQGTNSESDSEEKKWTIHRGIRRGKIQAAPGSQGADAKASSDSENLPQVQASCSNCGVACHSVRSTPKGHACSSCYQHWRRTGVARPLSSMPGRSNKRKPPRGLVVNHDDLAALAGQPNQANNSLQAIDTEIVSLKRQIQTNKQQVSGLKRKTCDGIDDLRPPEVSNRINARWTNEELLIAVQGVRKFGKDFAAIADVIGTKTEAHVRSFFVNYKRRYNLEGVLKEYETEHGPILIDDEKDEK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00684724;
- 90% Identity
- -
- 80% Identity
- -