Basic Information

Insect: Trichopria nigra
Gene Symbol: SNAPC4
Assembly: GCA_030522945.1
Location: JAPYZR010000875.1:14629-17190[-]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.48 1.3e+03 1.1 0.0 9 43 225 264 222 267 0.75

2 6 1.4e-11 3.7e-08 34.9 0.5 3 44 275 318 273 320 0.96

3 6 3e-06 0.008 17.8 0.0 6 42 332 372 330 375 0.93

4 6 7.8e-14 2.1e-10 42.1 0.0 1 46 382 428 382 428 0.95

5 6 7e-12 1.9e-08 35.8 0.1 4 43 438 477 436 480 0.96

6 6 2.2 5.8e+03 -1.0 0.0 7 24 548 566 547 567 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.48	1.3e+03	1.1	0.0	9	43	225	264	222	267	0.75
2	6	1.4e-11	3.7e-08	34.9	0.5	3	44	275	318	273	320	0.96
3	6	3e-06	0.008	17.8	0.0	6	42	332	372	330	375	0.93
4	6	7.8e-14	2.1e-10	42.1	0.0	1	46	382	428	382	428	0.95
5	6	7e-12	1.9e-08	35.8	0.1	4	43	438	477	436	480	0.96
6	6	2.2	5.8e+03	-1.0	0.0	7	24	548	566	547	567	0.86

Sequence Information

Coding Sequence: ATGGAAAGTAATGACGCCGAGTTAAGTGATGATCAAACTCTCCTAGATGAGATTGAAGCTATAGATATTGCCTTATCTGAGAAGACACCAAATTTACAAGTTGCATCCACCAGTCAATGTGCTGTTGAAGCCCCAGTCTTTCTGAAAGTAGAAAATGATCAAGACTTGCAAAATGAAaccattcattcatttaatcaaattaGTTCAGATAATGTTTTAAATGGTGAGCTAGTTACTTTTGAACCTTGCGGAGATGTTGATCAATTGGAAGAACTTCTTCAAATCAACAGAAAACTAATCGATTCGCTTCTAATGGCTCGCAAGGAGTTGACAGCAATTCTTGAAGACTGTTTAAAAAAGCTAGCAATTACTGATGAAAAATTAAGCAAACAAATGCAACCATGGCAGGATACAAAAGTAGTCACTTGTACTGCTGGTATTCCATACTTCAAAGATAAGGAACATTATGCTGCTCCTAAGAATGATGATGCCAAAACTAAGGCTACAAATGGGGAATTACAATTAGTGCATCTGCGATGTGTCTGTCGATGGAGTACAACAGATAGGTGTATCTTATTTAAAGCAATTAGACAAGAAACGATTCTCTCGATGCTGGATGAATCACAAAATGAATTTGATACTCAAAACGTTCTTTCTAAAGGAAGTCAATTGCAAAAAAGTATTAAACATGCCATTGGTTCCTTAGGCAGTAAGGAATTTGACTGGTTGAAAATTGCAGCAATGGATTTTGACAACAAACATTCGGCAGATGAGTGCCGGATTATGTGGAATCTTTTTTTACATCCTGATATCAACAAGTACAGGTGGAATAAGGAAGAAGAGgcaaaacttaataaaatggtgaaaaaatttaaatatcgagATTGGGACATGATTGCCAAAGCTTTAGGAACAAACCGAACTGGATATCAGTGTTTCATTCGATATAATACAAACAActggaaaaatttaatgaaagggCGCTTTTGGATGTCTGGAGAAGATGCGGCATTAACAAACCttgtaaatacattaaaaattggaGATCATATTCCCTGGGGTTATATAGCAAGTTGTTTGAAAAATCGCACGAAACAACAAGTATACTATCGTTGGACATTTAGCTTAGCACCACATTTGAAAAAAGGACGTTTTACAAAAGAAGAGGATGAAATATTGTTGAAAGCAATTTCTATGTATGGCAAGAAGTTTGGAACGATTTCAGCAGTAGTAATGCCTAATAGAACTGCTGTTCAGCTTGGTGATCATTACAATACTCTTTTACAAAGACAACGAAATAATCAAAACATTTGGACGACAGAAGATGACCATAAACTTGTGAAATTGTATTCTAAACATGGACCAAATTGGGCCCAGATTGTTAAAGATATGCCACACAAGACTAGAATACAAGCAAGGCATCGATACATGGCAATTCTTCGATATCAAAGTAAAGGTATTACAATTGAATCTATGTCTAGAAATAGAACAGATCCTCCAAAAGTTATTATGAACCCAGCGGTTTCTCCAGAACTTCGTATAACTGGAAATGAAGAGCATACTGACATTGATCAGAAATTAACTTCATATTTCAAGAATTATCATGCACATAATGATACGTTTGATATTAGTAAACATAAGGATGATTCTCGTAAACTTTatagacttttaaaaaatatggggtgtcatgattttaaaatacctaattataactattatttacacttttttgaCGCTCAGTTATTGAAGTCAATAGAAAAATATCACAGCAATTCACCTAGGGCATTCAAGCAATCTACCATGCTTCATAATTTGAGGGTAAAAATGTTCGGCTCTCAAGCTAACATAAAGAATTCACATTTTGAACCTCCATTACCCTTTGGTTGTCGGCCAGCACCAAAAAGAAGATACAAAGGACATGGTCTCAACTATGTGTACGATCCTAGTGAAAGGTACCAAATGGAACTGCCATCAACATATGAGTTTGATACTCCAAGCTCGGTTGTTCAAGTGATTGGCaaagaaaatgaagaacaatttacaaaattactaaAAGTATTACATGGTCAGACTAGGAAAAAACCAATTATTTATGTGTTAACGCCACATCAAATAAAAGAAAGCGTAGCCGTTACTAATTGTAATGATAAAgggacaaaaacaaaatataactgGCTAAGAGATCGGTTAGTTATAGAACACATGACACGAGAGGAATCCATCGAAGAAGAAGTATATGTGCCGACCTTAAATCCAAGTTACACGACATTATTTACATATCGAGGAATTCTTTCAGCAACAGAAAACATTCCTTACGACATAAATCGACCTTTCGTAGAAAACAAACTTACAGAAAGAGGAAGATATGCTCTTTCTTTACTTCGACGACGTtacgaatatttatttcgtCTTCCTATAGGCATGTCAAGAATTGTTCCACCAGATCCATCACAACTAAATAATCCAATTATCTTACCTAATTATAAACCACTTAAGAACCAAATGAAGCGAGCTGCTGATAAAAGTGCAgcaaaacaaataaagaaagtgAAAGCGTATTAA
Protein Sequence: MESNDAELSDDQTLLDEIEAIDIALSEKTPNLQVASTSQCAVEAPVFLKVENDQDLQNETIHSFNQISSDNVLNGELVTFEPCGDVDQLEELLQINRKLIDSLLMARKELTAILEDCLKKLAITDEKLSKQMQPWQDTKVVTCTAGIPYFKDKEHYAAPKNDDAKTKATNGELQLVHLRCVCRWSTTDRCILFKAIRQETILSMLDESQNEFDTQNVLSKGSQLQKSIKHAIGSLGSKEFDWLKIAAMDFDNKHSADECRIMWNLFLHPDINKYRWNKEEEAKLNKMVKKFKYRDWDMIAKALGTNRTGYQCFIRYNTNNWKNLMKGRFWMSGEDAALTNLVNTLKIGDHIPWGYIASCLKNRTKQQVYYRWTFSLAPHLKKGRFTKEEDEILLKAISMYGKKFGTISAVVMPNRTAVQLGDHYNTLLQRQRNNQNIWTTEDDHKLVKLYSKHGPNWAQIVKDMPHKTRIQARHRYMAILRYQSKGITIESMSRNRTDPPKVIMNPAVSPELRITGNEEHTDIDQKLTSYFKNYHAHNDTFDISKHKDDSRKLYRLLKNMGCHDFKIPNYNYYLHFFDAQLLKSIEKYHSNSPRAFKQSTMLHNLRVKMFGSQANIKNSHFEPPLPFGCRPAPKRRYKGHGLNYVYDPSERYQMELPSTYEFDTPSSVVQVIGKENEEQFTKLLKVLHGQTRKKPIIYVLTPHQIKESVAVTNCNDKGTKTKYNWLRDRLVIEHMTREESIEEEVYVPTLNPSYTTLFTYRGILSATENIPYDINRPFVENKLTERGRYALSLLRRRYEYLFRLPIGMSRIVPPDPSQLNNPIILPNYKPLKNQMKRAADKSAAKQIKKVKAY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -