Tnig001880.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Trichopria nigra
Gene Symbol
osa
Assembly
GCA_030522945.1
Location
JAPYZR010000447.1:22995-31212[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.7e-14 7.7e-10 40.5 0.0 2 51 854 903 853 909 0.93

Sequence Information

Coding Sequence
ATGGCTGCAACGCAAGCCGAGAGCCAACAAAACGATGTGAAGCTGACCGAGGCTGGGAAATGCGCGCAAAAGCGTCCGTCTTGCGGTGGAAATAGTGCTAGTGCCAGTGGGAAGCAGCAGCTGGATCCAGAGCCGGGTGAGAAGACGACCCGGGGCGCGGCCCAGCTGCTCAAGTATGCGAATCGCGAGTCTCTTTATGAGATGAGTCAATACCGCGCCGAGGACATTGGCGGACACCCCGCCGGCGAGGTCAAGTCACCCCGCGAACAGACTCAAAACAATCCCCAGGACAACCCAGTAGGTAAGTCGGAGCTCCTCGAtgcgccgccgccgccgccgcacTCGCTGCATCCGTCGCACCCGCCGCCGAGTCACCCGTTCGGCGCCAACCTAGCGGCGCGTCCTGACTACTCCGAAGACTATCCTGCAAATAAGCCACCCGTCGAGTACCTTGCGAGTAACAAGCAGCAACAGCTGCTGGTCGAGGGCGACGCCAGGCTGCACCAGCCAGATATGGATGAACACTACGCTCCAGCAAAAATGGAACCCCGGTTGGCTCATTTAGGAGCACCCGGAGCCTTTCCCGGTCAACCTCGATTCTTGTCCGGTCAAGGCATGGCCCAACCACCTGGACCGACTCCTACATTAAACCAACTACTTCAGGCCTCCAGTCCAGTGCATCGGTTTCACAGCAATTACCCTGCCATCGGACCGGAATCTTACCAGCAGTCGTGGTCAATGCAGAGGCCCTCCGTGGTGCCTCCCGTGTATCCCCAACCGGGTCAAAGACCTCCGCAGACTGGATCGCCGAGATTACATCCAGGACCCGGAGGTCCTGGTGGGCCAAGTTCTCCCACCCCAATGCCCTATCAGCCTTACTCGCAACGTTATTCGTCGCCAACAAGGCCTCATTCACCGTACGGTCATCACCAGATCAATTCGTATGGTGCACAAGGCAATCATCCAGCAGGCATGTATCCTGAACAACGAGGATGGAACCAAGCGGGTCCACCGAATCCTCCACCACCACCTTCTAACCAATCTAACCCCAGCCAATCGCCACAGCGAGCAATGTCACAGTCGCCAGCTCCGCCACCTTCTGCTTCCCCACAACCGCAGTCGGTTGGCCAACAACAGAATTTTCATGGGATGCAGCGATCGACAACTCCAAATACTCAAGGAATCGACTCAGGGGAACTCTCCGGCCAGAACAGTAATGACAGCTCGAATGGACCAGCCGGACCTGGAACACCAAACTCCCAAGGGATGAGACCTACCCCTTCGCCTACAGGGTCTACTGGTTCTCGCTCGATGTCCCCTGCTGTTGGCCAACAAAACGTTCAAATGCCACCAAGGCCATCGAGTAGCCAATCAGATGGAAGTGGACCTGCACGAATGAGCCATTCACCAATGGGGACTCAAGGAGGATATCAGCAGCCCTTGGGTCCCTCTCCACATATGCATAACTACAAGATGAATAGTAGCAGTCCAGGTGTACAACCAGGTCAGCCAGGGCCTGGTCCAACAGGACTTGGTAACATGGGTCCAATTGGCAGTGGTATGGCGTATCCTGGTGGGCCTGCAGCTCCAGGTCAACCAGGAGGGTATCCATCACAGGGCAACTATCCACCGCCCCGTCCACATATGCAATTTCCGCAGGGATACCCACCATCCAACTCACAGCCACCACCCAACAACCAGTATCAGCCTGCCAGACCCAATAACATGGTGCAATATCCCCCGTATCCTCACAAAATGGGCTTCAACAGTGTACCACCGGGCATGCCTCCGAGTCCTGGTCCTCCGCAAGGTTACGGAGGGGGCGGGAGCTCCGGGGGGATGGTGCCTCCGAGCACTCCCGGAATGCCCGGAATAAGCAACATGGGGCCACCGACAAGTTCGATGGGACCTCCGCCGCCGTCACCAAATCATGTGGCCAAtcagcaacaacagcagcagcctCCGTCGTCGGGCGCTCCGATGCAGTCACATCCCCATCCGCCGTCGGCTACACCACCCCTCAATCCAGAGGGAAGTCCCATGCCACCACCGAGTACAACCCCCAACTCGCATCCAGCACCCGTGCCTACGCCTACCAGTCATAACGCGGCGGATATCGCGGCAGAATCGTCGAATGACAATAGTATCACCACCACGGCTTCCGGCACCACGGCCATTAACGTAACATCAACGTCTAGCGGAACTGTGACATCGGTTATAACTACCGGTCCCGATGGGACGACTCTTGATGAAGGTTCTCAACAGTCGACTCTTTCAAATGCGTCAGCTGCTTCTGGAGAGGATCCAGCATTCACACCAAAGGTTCGAAAGGAAATGATGGGTGGTTACCATAGCCATCCGGCAACTCCACAGAGTACCGTACCTTCTCCAGGCCCAGCAAGTATTAATTCTATTCACGAAGAATATCAGGATATGAATAGTCCTGGATGGCCTCGCACACCAGCAAGTCCTATTTATAACCATGTGCCTCCAGACCCGTACAGATCTAAGAAACCCGATAGCTTGGCCAAATTGTATGAAATGGATGACTCGATGGAACGGCGAACATGGCTGGATAAACTAGTGTCGTATATGGAGGAGAGAAGGACGCCAATCAGTAGCTGTCCAACCATCTCCAAGAACCCCCTCGACCTTTTTCGACTGTACCTCTATGTGAAGGATAGGGGGGGCTTCATGGAGGTATGCAAGGTGCAGTGTAGTTCCATCTAG
Protein Sequence
MAATQAESQQNDVKLTEAGKCAQKRPSCGGNSASASGKQQLDPEPGEKTTRGAAQLLKYANRESLYEMSQYRAEDIGGHPAGEVKSPREQTQNNPQDNPVGKSELLDAPPPPPHSLHPSHPPPSHPFGANLAARPDYSEDYPANKPPVEYLASNKQQQLLVEGDARLHQPDMDEHYAPAKMEPRLAHLGAPGAFPGQPRFLSGQGMAQPPGPTPTLNQLLQASSPVHRFHSNYPAIGPESYQQSWSMQRPSVVPPVYPQPGQRPPQTGSPRLHPGPGGPGGPSSPTPMPYQPYSQRYSSPTRPHSPYGHHQINSYGAQGNHPAGMYPEQRGWNQAGPPNPPPPPSNQSNPSQSPQRAMSQSPAPPPSASPQPQSVGQQQNFHGMQRSTTPNTQGIDSGELSGQNSNDSSNGPAGPGTPNSQGMRPTPSPTGSTGSRSMSPAVGQQNVQMPPRPSSSQSDGSGPARMSHSPMGTQGGYQQPLGPSPHMHNYKMNSSSPGVQPGQPGPGPTGLGNMGPIGSGMAYPGGPAAPGQPGGYPSQGNYPPPRPHMQFPQGYPPSNSQPPPNNQYQPARPNNMVQYPPYPHKMGFNSVPPGMPPSPGPPQGYGGGGSSGGMVPPSTPGMPGISNMGPPTSSMGPPPPSPNHVANQQQQQQPPSSGAPMQSHPHPPSATPPLNPEGSPMPPPSTTPNSHPAPVPTPTSHNAADIAAESSNDNSITTTASGTTAINVTSTSSGTVTSVITTGPDGTTLDEGSQQSTLSNASAASGEDPAFTPKVRKEMMGGYHSHPATPQSTVPSPGPASINSIHEEYQDMNSPGWPRTPASPIYNHVPPDPYRSKKPDSLAKLYEMDDSMERRTWLDKLVSYMEERRTPISSCPTISKNPLDLFRLYLYVKDRGGFMEVCKVQCSSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-