Tnig008160.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Trichopria nigra
Gene Symbol
ARID5B
Assembly
GCA_030522945.1
Location
JAPYZR010003754.1:8836-23553[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.5e-24 1.4e-20 75.0 0.0 2 89 224 309 223 309 0.94
2 2 2.6 2.3e+04 -2.6 0.0 71 86 1107 1122 1099 1123 0.76

Sequence Information

Coding Sequence
ATGAATAAGGATGAGGTTTTGACGATCTCGGAAAAGGTCGTCGTTCGCGTCAACGACCTCCTTACGTGGTTGTCTCCGGATCTGGCGTGGTCCTGGGGTCGAGAAGTCTCGTACCCTTCCACGCCCTCGACGTCTCCGGAGGGTAGCCCGCAACCCCAAGTCTTGACTGATCCTGGAATCGACTTTTCGGAAGTGGACAAGCAGAAAGAGGACGAGGACAATAATTCGCCATCTACGAAGCAGAACGATGTTTTCCTCGGGAATTCCAAGGTCGTGGTACTTTCTTACCCCAGGTACTGTCGGTATCGAGCGCTCCTTCGTAGGATCGAAGAATCGGAGCCATCCTGGCTGAGTTCGGCGGCAGCTGCGGCACTCGGGGGCTTCTCAGCGGTACCTGGCACCAGGGTCCTCTTCTGCAGAGATACCTTCGATTATCCCGACCTTGAAACGCACGAGTTGCTCTGCAACCATTTAGcaCCAAAATTGAAAGGAAGACCTCGGAGAAAACGTAAAAAGCGAAGTGTATCACCTGGTGAGTCCAGCAATGAAAGCGAAGCTTCAGTTGCATCTACTTGTAAAGGATCGTCTACGAATTCCAATCAAAGTTTGTCTGGTGCTAAAGCACCTATATCAGGAGTTCGAAGAAGCGAAAGAAATACTAGTGCCGAAGAGAAGAGATTCGTCAATGACGTACAAAACTTCATGTCCACTAGGGGCACTCCAGTTGGAAAAATGCCATGGCTTGGTTGCCGTCAAAtCGATTTGTTCCCGTTTTATACAAAAGTTCAGAACTTGGGTGGTTACGATTCAGTTAATACTAACCGTCAATGGAAAATGATATACGATGATATTGGTGgtaatacaaattcaaatagcGCTGCAACAACCACTAAGAAATACTATGAAAGGTTGTTATTGCCTTACGAAAGGCATCAACGTGGCGAAGAAACGAAAGTTCGACCAAACCAGGGGAGTAGGCGTAGTAAGATAATTAGTAACACAGAGGATGTTGTCGAAATTAAACAAGAGGTTGAAACTAAAACAGAGTGCGAAAGTCCACCACCATCAGAAACTCCGCCACCTACAGGAACATCGAATTCCACAACTGTTACTCCACCTTTGCAGACTGTTTTATCATCAacgTCAATCCTGCCTGGTGACAAACCGAAATCGGAAGGCGGAAAGACGTCTTCACTTCGAAGCGTGCGAGTGAAAACGGAGCGCTTGAAATCCTTGAACACGATGATAGCCAACAACACGTCACCTGCCAGCCAACAAACCAGTCAACTGCCGAGTCCGCCGCCAGTGCTGAGCACGTCGGGGTCCTCTTCTCCTACAAGTACCCCGTCGACGACGCCGACATGCGGCAGTCAGAGTGCCATGGAACGGCAGCTGAATAGTCCTCCGTTGGTCTCGCAAAGGGTTTCGCCACCGCCCCCAAGCTCGTCTCCGGATACGACCGCAGGGACGCCTGCTACGGCAGTGGTGACGTTGACCCCGCCGCCGGAAAAGGACATGAAGGAGATGAAGCTGGATCCAAAGCAAACGAACCTCATGGCACAGGGCAAGGAGAATATTCCCCTCTTCGACGAGAAGCCTATCTTCGTCGATAAACCGATCGTACAGCCGAGATCGCCGGAGATCATCGATCTCGAGAGCGAGAGCGATACCAGCAGGGACAAACTTATCATCCCGAACTTTAAGAAACGGAAGCTCGAGATTCTGAGGGAAGGAGGTCTCGAGGTCACGGCCGTCGAGTTGGATACTCGACCCAGTGTTATTCAACCGAACGCCACGACTGTAGCAACGCCATCACCCGCACCGGCATCCACGAACCTCAAAACTGAGGAGAATCCGTCCTTCTCGTTGCCAGTTACGCCAACATCTATTCCTAAACTTATAAACGTCACGGTAACACCAGACATTGGACATATGTTCCCGTCAACGCAAGAGAATCGTTCCTCGAGTGCTACGTTGCGGCAGCACCAGCAGCACCAGCAGCAGCACCAGCATCAGCATCAGCAGCAGCATCAGCAGCAGATGCCTGTCAAACAACCAACGAGCCAAAGCAGTAATCCGAGCGAGGCGACCAATAATAACGTAGTCAACAGTAGGATTATCAACCTGGGCACGTCGAATAATGCGACGCTACTGCAGCTTTACGCTAACGCGAATGTGCCCATGCCAAAGGCGAGCAATCACCGGTTCACAAATGCACTGCCGGTAACGAACGACAGATCCGCGCCAATGCAGAAAGTAATACAATCGAGGTCGATCTTCGCCCACAACGAGAAGGTTGTTTACGGGAATCCAAAGGACATTCTGATCCCTTCCAAGTACCCTCCGGTGTCAGTGGTTGTACAACCGCAATTGGTCCGGAACGAGCCAGTCCCTGGAGGCGTTCTGGACCTCACGCAAAAGCCCAATGTGAGGCCATCCTTCGCGAGGCCCAATTTGGAGATCGTCAAGGTTCCCGTGGTGCCAAGGCCTACTCCGCTGAACCTCGAAACTAGAAACGCACACTGTAAAGACAAGCCTTCCGAGACCTCGAGAAAGAACCAATACAACAGTTATCAAAGTATGCTGGACAGTAGGACGATGGCGACGAATAACCTCGAGATCACTCTGGTCGGTCCGAAAAAGTCGCATTCCTCAGTTGGTCCTCAACCGGGGCTTCAGTCGACGAGTCCACCGGTCCGAGCGAACGGCGTCATGTCGCCAATAATGTCAAGAAGACAACAACCGCACCCTTCGCCGCACCCTTCGCCGCACCAACAACAAcagcatcagcagcagcagcagcagcagcaacaacaacagcatACGCCTCCGCCTTCGCTGTCGCAACAGCAACAGCTGAACGGCAAGTACTCGCCAAGGAGCGAACCGGTGTCGCCGTTCGCCCCGAGGAAACAGGTTCATACGGTGATACCAAACGTCCCCAATCTGAGCCATCTGAATAACGTCGGGGCATTTGTGAAATCCAGCAACCACCAGCCAAGCAGCGCAGAGAAGAGAAGAGTCGCTGACGTCGCCAAGGAGCATCAGCGGAGAATCAGTGAAAGCGAAAAGTCTGTAGCCGGGCAGTCGCGACTCGAGACGTCGTCGTCGCAAAGACAGCCGGACGGCTTGCGAAGACACAGCGTACCCAATATACCTTCGGGTTTCATTCCCTCCGTGCCGCAGAGCAATCCAGCTTACTTGCCGCAACTGCCGAACAACACCGCCGGCAAGTTCCTGCCTTTCTTGGACCCCATGTACTATACGGCGCTGTACAATGGCCTGCTCCCGGGACCGCTGGGACATACGGCCGCGGCGCCCATGCTGTCGCCCGAGCTCAGCGCATACTACAAGGAACATCTAGCTTCGCTAACAAGACTGTCGATGGCAACGGGTCAGCATCAATCGGCTGCGCCGACGTCAAAATAA
Protein Sequence
MNKDEVLTISEKVVVRVNDLLTWLSPDLAWSWGREVSYPSTPSTSPEGSPQPQVLTDPGIDFSEVDKQKEDEDNNSPSTKQNDVFLGNSKVVVLSYPRYCRYRALLRRIEESEPSWLSSAAAAALGGFSAVPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSVSPGESSNESEASVASTCKGSSTNSNQSLSGAKAPISGVRRSERNTSAEEKRFVNDVQNFMSTRGTPVGKMPWLGCRQIDLFPFYTKVQNLGGYDSVNTNRQWKMIYDDIGGNTNSNSAATTTKKYYERLLLPYERHQRGEETKVRPNQGSRRSKIISNTEDVVEIKQEVETKTECESPPPSETPPPTGTSNSTTVTPPLQTVLSSTSILPGDKPKSEGGKTSSLRSVRVKTERLKSLNTMIANNTSPASQQTSQLPSPPPVLSTSGSSSPTSTPSTTPTCGSQSAMERQLNSPPLVSQRVSPPPPSSSPDTTAGTPATAVVTLTPPPEKDMKEMKLDPKQTNLMAQGKENIPLFDEKPIFVDKPIVQPRSPEIIDLESESDTSRDKLIIPNFKKRKLEILREGGLEVTAVELDTRPSVIQPNATTVATPSPAPASTNLKTEENPSFSLPVTPTSIPKLINVTVTPDIGHMFPSTQENRSSSATLRQHQQHQQQHQHQHQQQHQQQMPVKQPTSQSSNPSEATNNNVVNSRIINLGTSNNATLLQLYANANVPMPKASNHRFTNALPVTNDRSAPMQKVIQSRSIFAHNEKVVYGNPKDILIPSKYPPVSVVVQPQLVRNEPVPGGVLDLTQKPNVRPSFARPNLEIVKVPVVPRPTPLNLETRNAHCKDKPSETSRKNQYNSYQSMLDSRTMATNNLEITLVGPKKSHSSVGPQPGLQSTSPPVRANGVMSPIMSRRQQPHPSPHPSPHQQQQHQQQQQQQQQQQHTPPPSLSQQQQLNGKYSPRSEPVSPFAPRKQVHTVIPNVPNLSHLNNVGAFVKSSNHQPSSAEKRRVADVAKEHQRRISESEKSVAGQSRLETSSSQRQPDGLRRHSVPNIPSGFIPSVPQSNPAYLPQLPNNTAGKFLPFLDPMYYTALYNGLLPGPLGHTAAAPMLSPELSAYYKEHLASLTRLSMATGQHQSAAPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-