Tnig005562.2
Basic Information
- Insect
- Trichopria nigra
- Gene Symbol
- -
- Assembly
- GCA_030522945.1
- Location
- JAPYZR010002158.1:738-1352[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.45 1.1e+03 1.2 0.4 3 15 46 58 44 72 0.82 2 2 2.1e-09 5.4e-06 27.8 13.0 2 62 129 189 128 191 0.93
Sequence Information
- Coding Sequence
- ATGCCATCATCGGTAAGCAACGTGTCCACGGGCTCGGGGAAAACGTACGAGACAAAATTCTCAATGTCATCACCGAGCACATCGGCAGCCACGGAGCCGGCGAAAAAGGCGCCACGTTCCAGGGCCGTTATCGAACCGAGAAACAATAGAAAGACGAAGAGGAACAAGGAAGCGAGCGATTGCGAGGAAGAGGTCGCGGAAAAGAAATCGGAGGATCAGCCGAGGTACACGACGAGATCCGGCGGGGTGTACACGAAGCACATCAAGGAGGAAGCACCGGACTCGCCGGAATCGTCGAGGAAGAACTCTTGGTCACCGCGACGCAGTTACACCGCGTCGAAGGGCGCCAAAAGGAAGCGCATGACGGACAGCGACTCCGAGGACGAGGACAATTATCGGGAATCGCGCGAGAAGAACAACGAGGCATCCAGGAAGTCGAGAATGAACAAGAAGGCGAAGGAAATGGAGATGTGCAGCAAGGCGAACGAGCTGGAGAAAGAAAATAGGATTTTAAAGATGAAGGTGCAAGAGCTGGAGAAGCTCGTCACGTCCATGCGCAACGCTCTTTTAAAATCAGCCCTCGACAGGAATAGCAACCAGTCGAAACGGATTTGA
- Protein Sequence
- MPSSVSNVSTGSGKTYETKFSMSSPSTSAATEPAKKAPRSRAVIEPRNNRKTKRNKEASDCEEEVAEKKSEDQPRYTTRSGGVYTKHIKEEAPDSPESSRKNSWSPRRSYTASKGAKRKRMTDSDSEDEDNYRESREKNNEASRKSRMNKKAKEMEMCSKANELEKENRILKMKVQELEKLVTSMRNALLKSALDRNSNQSKRI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -