Tnig011003.1
Basic Information
- Insect
- Trichopria nigra
- Gene Symbol
- Atf2
- Assembly
- GCA_030522945.1
- Location
- JAPYZR010005816.1:2652-4397[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7 6.9e+03 -1.3 0.5 40 57 236 253 234 257 0.50 2 2 9.3e-10 2.3e-06 29.0 9.7 9 65 294 350 290 350 0.95
Sequence Information
- Coding Sequence
- ATGCATGAATCCCAAAAGCCTTTCGTTTGTCCTACTCCAGGATGTAAGATGAGTTTCATCAATGAAGATCATCTTTCTGTACATAAGAAGAAACACGATATGGTATTGACACTTGAAGCCAGTAGCAAAAATGCTGcattttttgTGGACCAAACTCCTACGCCTACTAGGTTTATACGGAATTGTGAAGAAGTCGGACTTTTTCAAGATTTACACAATGTTAATCCTTTTGACGAAACATTTAGAAGAGCAGTAGAAactggaaaaaatgaaatgccATCAGTTTTAGAACCAACCCAGAATGACGACTCTTTGCACACTCCACAAATATTTCCACATATGATAGATTGTACACTGGTTGTTGATAACAGTATAcctattcaaaataaatcagaAAATGAAGTGGTAAAGCAGACATCGAATACGGAAACTACCAACCATTGCCAAGTTCTGAAAACTTCAGAAATCGTTGACAGCTTGGTAGGAGACGTATCTGATTCCCCAAAAGCCTTAGAAGCCACTTATAAACAAATAACCTCGCCAACCCATTTatCTATAAATGGCGCTAAAGTGCAGCTGTTGCTACAAACTGATAATGGTCAAATAATGCAACTATTAGCTACACCTCTTTCTGAAAATGGAAATGACAATAATACTGTTGTAGTGGAGACAGAATCGTCTCTTTCAAGTGGAATTAGTTCCAAGAAAAATTCCGAACTTTCCTTGGCTAAAGtgaaattaaaGCAAACTTTGAAGaagtacaataataattcagacaGTGTGACGAATAACAGTACTTCGACTCCAGATAATGCAGATAAGACTACatcgaagaaaaaaggaagaaataatGCAGGCAACTGTGCTAAACAGGACCTTCTCGAAAGAAATCGAGCAAGCTCCATGCGGGCTCGAGCTAAAAGAAAAGCCTGGGTACAGGAATTGGAGGAATCCCTTcataaagttaatgaaaaaaatgcattattacaaACGGAAGTGAAGGCTTTACGCAATCAAGTCACTAAGTTAAATACTCTTCTATTGGCTCACAAAGATTGTCCCGTTACAAAAGCCATGACAAAAGGTAACTTTGCAAGCTTTCGATTTgtttttgcttaa
- Protein Sequence
- MHESQKPFVCPTPGCKMSFINEDHLSVHKKKHDMVLTLEASSKNAAFFVDQTPTPTRFIRNCEEVGLFQDLHNVNPFDETFRRAVETGKNEMPSVLEPTQNDDSLHTPQIFPHMIDCTLVVDNSIPIQNKSENEVVKQTSNTETTNHCQVLKTSEIVDSLVGDVSDSPKALEATYKQITSPTHLSINGAKVQLLLQTDNGQIMQLLATPLSENGNDNNTVVVETESSLSSGISSKKNSELSLAKVKLKQTLKKYNNNSDSVTNNSTSTPDNADKTTSKKKGRNNAGNCAKQDLLERNRASSMRARAKRKAWVQELEESLHKVNEKNALLQTEVKALRNQVTKLNTLLLAHKDCPVTKAMTKGNFASFRFVFA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -