Tnig024782.2
Basic Information
- Insect
- Trichopria nigra
- Gene Symbol
- XBP1
- Assembly
- GCA_030522945.1
- Location
- JAPYZR010019545.1:579-2204[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.8e-13 2e-09 38.8 13.9 2 64 86 148 86 159 0.95 2 2 2.3 5.8e+03 -1.1 0.8 35 49 211 225 208 245 0.70
Sequence Information
- Coding Sequence
- ATGAGTGCTTTAAAAAGTGTCATCATCACGTTGCCCTCTAAGGGATTGTCGAAAAATACATCAAGCATCACCTGTTATCCTAACAAATCAATCTCCAAATTAAACTTGACTGATTCTGCACTAGGTGATAGGATCAGAATGAACTGCACTAAAATGTCAAAACATCTGgatatctttaataataatgatgcaACAATTCTTAAGCAGGATGCCTGTATGCGAGGAAAGAAACGTCGCTTAGATCATCTTACTTGGGAAGAAAAGCTTCAGCGGAAaaaattaaagaaCAGAGTCGCAGCACAGACCTCTAGGGACCGAAAGAAAGCCAAATTAGATGAGTTAGAAGATGCAGTAAAAATACTCAAAGACAGAAATGATATTCTGATGCAAGAATGTTCAAGGTTGAAGGTGCATAATGAAACCCTTATGAGAGAAAATGAAAGGTTGAAGCTTAATGGAGAATCAAATAAAGCCGAGGAAAAAGTCTGTAGTACTTGTCAAGCAGGGTGGGACAGCACAAATGGCACATCCTCTGACAATGAAAATGGACACATCCAGGCTCCTGAAGATTCTAACGCTTTACCTCCTCTCGATGATCTATTCAGCGAATTCCAAGGAGACGACTACATCGAACGACTCGAAGAACTCGCAGAAAGCCTTTTGCGAGAGGTTACCGCAGAAGTGGAAGCAAATGCTTCTCAATCGAAAGAACagACTTCAGTTAAGGAGGAAACCGTCAAAGAATTTGACGATTCAGAAAGAATGGTGGGGGAGGCATCAAATAATGTGGAAACCAATTGCTTTGACAAAAGCCTAGTATGCTGGCAGTCTACTGCAAATTTTGTTTCACCGTGTAGTAGTAAAGTTGAAGTTAAACGTGAACCTCTACACGATGTCGATACAGTTTATGGCACTTACGACGAGGCTACAAATTGTATAACGATAATATATCCCGGCGATGACGATTGTGTGAAAATTCAAGAATGCGTTCAAGAAGTTAGTTCAGATACTGTTTATCACAATGAAGAAGCAGCCTGTTCGACGCCTATTCATTTGTATTCAAACAAATACTCACCTCACACTCATGCAGAGACGATGTCGCCCTTAAGCATCCACTCTGAAGATACCAATGTAGGCACACCTATTAACAAATTTGACTGTGGACGATCTGATGGTTATGAATCACACGGCTCTCCCAGTGATGGAGCTAGCATAACTAGTGGGCACGCATCTCTCACAGATATGTGGCATGAAAGTTTCTCAGAATTATTCCCTAGCTTAGCGTAA
- Protein Sequence
- MSALKSVIITLPSKGLSKNTSSITCYPNKSISKLNLTDSALGDRIRMNCTKMSKHLDIFNNNDATILKQDACMRGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKLDELEDAVKILKDRNDILMQECSRLKVHNETLMRENERLKLNGESNKAEEKVCSTCQAGWDSTNGTSSDNENGHIQAPEDSNALPPLDDLFSEFQGDDYIERLEELAESLLREVTAEVEANASQSKEQTSVKEETVKEFDDSERMVGEASNNVETNCFDKSLVCWQSTANFVSPCSSKVEVKREPLHDVDTVYGTYDEATNCITIIYPGDDDCVKIQECVQEVSSDTVYHNEEAACSTPIHLYSNKYSPHTHAETMSPLSIHSEDTNVGTPINKFDCGRSDGYESHGSPSDGASITSGHASLTDMWHESFSELFPSLA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01488284;
- 90% Identity
- -
- 80% Identity
- -