Tnig017088.1
Basic Information
- Insect
- Trichopria nigra
- Gene Symbol
- Jra
- Assembly
- GCA_030522945.1
- Location
- JAPYZR010010990.1:2235-3065[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.9 2.3e+03 0.2 0.2 24 55 30 61 29 66 0.80 2 2 1.2e-15 3.2e-12 47.8 12.7 2 65 199 262 198 262 0.96
Sequence Information
- Coding Sequence
- ATGGTGCGAAGTCTCATAATGGATTCAAACTACTTCGAGGACGGTAGTTACATGTCAGGGAACCGCGACAACCTCGGTCATTTAAAGAGGAATCTGACGTTGGATCTCAACTGTCAGCGCCAGGGATTAGCGGGTAAGAGGCCGCGGTTGGGTCAGCTGTCACAGAGTCTCAATAACGCATTGCCCCTTCTCAATTCTCCGGACCTTCTGAAACTCGGTTCGCCGGACCTGAACATGTTGAAGCTCGGTTCGCCCGAGCTCGAAAAGCTAATCATCGCCCAACAGGACGGCCTGGTAACGACAATGCCAACGCCGACCACTCAGATTCTGTTCCCCAAAACTGTCACCGAGGCCCAAGAACTGTACGCTCGAGGCTTCGTGGACGCTCTTAACGAGCTGCACCATTCTGACAGCTCGCAGGAACCCGGAAGTATGCACGGGGCCACATACACGAACCTCGAACCACCTGGCAGCGTGCAGAGCACCGAATCCACCATGAGCCAAGGTCTGATCATGATCAAAGACGAGCCGCAAACGGTACCCAGTGTCTCCAGTTCGCCACCGTTGTCGCCTATCAACATGGAGAGCCAGGAGAGGATCAAGCTGGAAAGAAAGAGACAAAGAAACCGCGTGGCCGCCTCCAAGTGTCGCAGGCGCAAGCTCGAAAGGATTTCCAGGCTGGAGGACAAGGTGAAACTCCTCAAGGGCGAGAACACCGACCTGAGCCAAGTCGTCAACAGGTTAAAGGAACACGTGTGCCGTCTCAAGGAACAGGTGATGGATCACGTGAACAACGGGTGCGAGATGATGCCCATACATAGTCATTATTAA
- Protein Sequence
- MVRSLIMDSNYFEDGSYMSGNRDNLGHLKRNLTLDLNCQRQGLAGKRPRLGQLSQSLNNALPLLNSPDLLKLGSPDLNMLKLGSPELEKLIIAQQDGLVTTMPTPTTQILFPKTVTEAQELYARGFVDALNELHHSDSSQEPGSMHGATYTNLEPPGSVQSTESTMSQGLIMIKDEPQTVPSVSSSPPLSPINMESQERIKLERKRQRNRVAASKCRRRKLERISRLEDKVKLLKGENTDLSQVVNRLKEHVCRLKEQVMDHVNNGCEMMPIHSHY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01488278;
- 90% Identity
- -
- 80% Identity
- -