Tdro003311.1
Basic Information
- Insect
- Trichopria drosophilae
- Gene Symbol
- nfxl1
- Assembly
- GCA_030407085.1
- Location
- CM059582.1:53306886-53315810[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 2 9.6e+04 -7.8 5.6 15 19 124 128 123 128 0.81 2 21 0.14 6.9e+03 -0.5 0.8 4 10 159 165 158 165 0.95 3 21 2.2e-08 0.0011 21.3 18.3 1 19 173 190 173 190 0.99 4 21 1.3 6e+04 -3.5 0.5 6 10 216 220 215 220 0.87 5 21 3.3e-07 0.016 17.6 13.6 2 18 228 243 227 244 0.91 6 21 0.55 2.7e+04 -2.3 0.9 6 10 269 273 268 273 0.90 7 21 0.00044 21 7.6 10.7 1 19 279 298 279 298 0.95 8 21 0.00011 5.2 9.5 8.1 1 18 334 351 334 352 0.97 9 21 0.00037 18 7.8 8.8 1 12 386 397 386 397 0.94 10 21 1.9 9e+04 -4.0 1.6 6 10 407 411 407 411 0.95 11 21 9.4e-08 0.0045 19.3 13.4 1 19 417 435 417 435 0.91 12 21 0.00011 5.4 9.5 8.2 9 19 483 493 481 493 0.90 13 21 0.00022 11 8.5 6.9 1 12 503 513 503 513 0.96 14 21 0.7 3.3e+04 -2.7 2.8 14 18 544 548 544 549 0.91 15 21 1.6 7.6e+04 -3.8 0.6 9 12 566 569 566 569 0.77 16 21 4.4e-05 2.1 10.8 7.3 1 12 585 596 579 596 0.91 17 21 0.43 2.1e+04 -2.0 1.3 6 10 610 614 609 614 0.89 18 21 0.00079 38 6.8 17.6 3 19 623 639 622 639 0.92 19 21 2 9.6e+04 -5.1 2.4 9 13 645 649 644 649 0.74 20 21 0.00036 17 7.9 11.7 1 16 684 698 684 703 0.91 21 21 2 9.6e+04 -4.1 1.3 6 10 734 738 733 738 0.85
Sequence Information
- Coding Sequence
- ATGAGACGATTTAGAAGTGCTCAGTCTCAGAATCAAGCGTCAATAGTGAAGCATCTTCAAGCTAATAATCACTTACTGGAATCTTCCAGCGAAGAAGAGGATGAAGAGGTTTTGGAAAAAGCAGTGGGCAAGGTTTTGTCGAACTATCAATGCGAAGGAGGTGATACGGAGAAAACACTTTCGTACTTGACAGAAGTCTTCCAGTCCGGTGGAGCAATTTGTCTCATTTGTATTTCATCTGTGAAAAAAACAGACGCTATATGGAGTTGCTCGAAATGCTTTACATTTATGCATCTACCATGTACACAACATTGGATACGGGATAGTTTAagctacaaaaatgaaaaaggaatAATACCCTTATGGTGTTGtcCAAAATGTAGAGCTGAATATCGAGAGGATGAGATACCAGGAAGATATACATGTTTTTGCGGTAAAACTGAAGATCCACCATATCAACCATGGTCAATACCGCATTCTTGTGGAGAGACTTGTGGTAAATTTCTTCAACCAAAATGTGGTCATAAATGTACATTGCTTTGTCATCCTGGACCTTGTCCACCATGCCCAAAAATGGTTACTTTGAAATGCTTTTGTGGCAAGCAACCGGCTCGTCCACGTCGTTGCAATGCTAAAGAATGGAGTTGCGATGAAATTTGCAACCAGCAGTATAAAAATTGCGCACACCGATGCCTTCAAAAGTGCCATTCAGGAGAATGTCCACCATGTAACGAAATGGTACTATCATCATGTAACTGCAAGAACAAAAGTGAAATGAGAAAGTGCAATGAAAGATCATGGCACTGTGAGAAACCTTGTGCTAGACGCTTCTCTTGTAATATACACGTTTGCGACGGTGTTTGTCACAAACCTGGTGATTGCACTGTGTGTCCTTTGGAAGGAAACAGAACATGTCCAtgtggaaaaaagaaattttctatcTCATGTAAACAACCAAATGTTCCGAATTGTGGCGACACGTGCGGAAAATTGCTAGATTGCGGTGCACATTATTGTAGCATGCGATGTCATGTCGAACGATGTGGTCAGTGCCTGGAagttgttacaaaaaaatgtcgttGCGAAAGTTACACCAAAGAAATAGCCTGCACCAAGGAGTttcattgcaacaaaaaatgtacgCAGATGCGCCTCTGCGGTAGACAtacttgcaataaaaaatgctgtGATTGTCTTATTAAGAATACTTATAACGTATGTGAAAAAACGTGTGACAGCACTTTAAACTGCCGAAAACATAAGTGCTCTGCACCATGCCACAGCGGACCGTGCTATCCGTGTACTCGAACGTTTGTTATTCAGTGCAGGTGCGgtaatagtaaaattactgttCCCTGTGGTACAGTGAAGAAAGTTAAGCCTCCAAACTGCAATAAGATGTGTAAGATACCACCAATTTGTCATCATCCAAAGAGAGAATCGCATAAATGCCATCAAGGCGAATGTCCACCCTGCCGAAAAATTTGTGGATTAGTTCGTAAGAGATGTGGACATAGTTGCCCAGAAGTTTGTCATTCTAAAGTATGGATGAAGGTTAAAAACGGAATCCCTGAAAAACCTGCGGGTCCTTGggaaaataagaaagaaaaatgggAATTAAAGTCTCGACCGTGTCCATCTTGTGTTGTTTCCGTCATGGTCACATGTCTTGGAGGGCACGAAACTCGACCATGGCCATGTCATAAGGCAATTCCAAGTTCTTGTCTGCGGGAATGCGGGCAGCTTTTATCGTGTACTAATCATACGTGTGAAAAATTATGCCACAAGATTCAGCCGGGTGAAGATGAGGATACGAAGTGTATGGCCTGTGAGCAACCATGCATATTTGACAGGCCTAAAGGGTGTACTCATTCTTGTCCAAAACCTTGCCATCCATCACCTTGCGATCCATGCAAACAATTGGTACGTGTTCCCTGTCACTGCGGAATTAATACGTTATATATAAGATGCGCACAACTGACCTCGGCAACAACTGAGGAACGAAACAAACTTCTAAGATGTGGCAATCAGTGCCctaaaaatTATTCTTGTGGGCATCGATGTGTCGATGACTGTCATCCCGGTTCGTGTGAAAAAGAAGAAGTTTGCATCAAAAAGGTCAAGGTACTTTGTAAATgcaaacgaattaaaaaagactTTTCTTGTGATGTTGTTCGCGCTGGAAAAGGCATCGTACAATGTGACGAAACTTGTATGAAGAAAAAGGAAGAAGCGGAACGAATTCGAGAAATTGAACTGGAAAAGAAGAGGAAAGAAGAggaattacgaaataaaaaagaaattgaaatgtttgaaaagaaGTTCCGACCACGAAAGAAAGGAAAAGATAAGTATCAAAACAAAGACAACACTAACGACAATGCTAATGCTTACAGATGGATCTGGATTTTAGCTGTTGTTTTTGCCATTACGGCTACCGCCGCaattttgtacttaaatattacACCGTAG
- Protein Sequence
- MRRFRSAQSQNQASIVKHLQANNHLLESSSEEEDEEVLEKAVGKVLSNYQCEGGDTEKTLSYLTEVFQSGGAICLICISSVKKTDAIWSCSKCFTFMHLPCTQHWIRDSLSYKNEKGIIPLWCCPKCRAEYREDEIPGRYTCFCGKTEDPPYQPWSIPHSCGETCGKFLQPKCGHKCTLLCHPGPCPPCPKMVTLKCFCGKQPARPRRCNAKEWSCDEICNQQYKNCAHRCLQKCHSGECPPCNEMVLSSCNCKNKSEMRKCNERSWHCEKPCARRFSCNIHVCDGVCHKPGDCTVCPLEGNRTCPCGKKKFSISCKQPNVPNCGDTCGKLLDCGAHYCSMRCHVERCGQCLEVVTKKCRCESYTKEIACTKEFHCNKKCTQMRLCGRHTCNKKCCDCLIKNTYNVCEKTCDSTLNCRKHKCSAPCHSGPCYPCTRTFVIQCRCGNSKITVPCGTVKKVKPPNCNKMCKIPPICHHPKRESHKCHQGECPPCRKICGLVRKRCGHSCPEVCHSKVWMKVKNGIPEKPAGPWENKKEKWELKSRPCPSCVVSVMVTCLGGHETRPWPCHKAIPSSCLRECGQLLSCTNHTCEKLCHKIQPGEDEDTKCMACEQPCIFDRPKGCTHSCPKPCHPSPCDPCKQLVRVPCHCGINTLYIRCAQLTSATTEERNKLLRCGNQCPKNYSCGHRCVDDCHPGSCEKEEVCIKKVKVLCKCKRIKKDFSCDVVRAGKGIVQCDETCMKKKEEAERIREIELEKKRKEEELRNKKEIEMFEKKFRPRKKGKDKYQNKDNTNDNANAYRWIWILAVVFAITATAAILYLNITP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -