Tdro078866.1
Basic Information
- Insect
- Trichopria drosophilae
- Gene Symbol
- pnr
- Assembly
- GCA_030407085.1
- Location
- CM059587.1:19955807-20000441[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.6 4.9e+04 -3.6 0.1 7 12 279 284 270 286 0.74 2 3 1 1.1e+04 -1.6 0.7 10 19 381 390 379 392 0.80 3 3 1.5e-16 1.6e-12 49.1 5.1 1 35 513 546 513 547 0.98
Sequence Information
- Coding Sequence
- ATGTTCAATGTACCGCCCAAGTTCTACGATCTGTGCCGCCTTTGTTTATCGTCCGACGGTGTCAAGTTGTCCATATTCGAGGAGGAGGGTACGCAGAGGAACTTTGCCGACAAGATCCTCACCTGCCTGTCGATTACGATCTCTCTTTTATCTCGCCTCACCCCCCTCTCGATACCACCTCAACTTTTTGTCCTTCCTTCCATCGACATCCTCCCCGAAGGTACCAGCTCCGATTCCATACTCTGGGATCCGATCTGTCCTTTGGCTAAATATAGTTTCGCCCCGAGAGATAAGCTAAAGATAAACGCCGCAAGGCGGGCTCTCCAATTCGCGAGTTGGCCAGTTGGTAACGATACGCTTCTTCTCACAGGTGAACGATGGGGACACGCTGCCACCGATCATCTGTCACAGgaAAAGTCTTTCTCCACTGCCAAAGCAGCGGACCTGAGTCCGCTTCAGTCGTTTTTGCAGCTGAACAAAACGCTGTTCAATGACGAGCCAAACTCCCCGGCCAGCATTAATCAAAATGTCATACCTCAGACACAAACGCACCACCTCGAGCTGCGCTCAGAACAGCCCAACGACCAGGGTAACGTCAAGTGCGAATTGGACGACGACACGTGTTCCAACAGCTCTGACCCTGACAGGCTGGAGATCGAGGACCGGGATGATCAGGAGTCCGACGGCGAAGAGAACGGTTACGACATGACCGTACGCAAAAGGGTCAAGCTCGAGAACAGCTACGAGAGTTCCAAGCGAAGCACCCCGGACACCAGCCCCATCGACAGGATGGACACCCCCGAAAGCAATTGCTCCGACATCCAGGTCGACCAGGAGACGACCAAACTTTGGCAGGCGCTTGCTAGTAATCGAAGCCTGGAGATCACCCGAACGAACGGAGATAAGGTGAACAACGGATTCAGCGGGGAAGCGACCAATTTACTGCGGACCTTGATCAACAATAGGCAAATCGGTATTACGGCCATCGACGGGGACAATCGTACATCGCCGCCGCAGATAAGATTCTACAGGGACACCCAAGGGACGACTTTGGAACGGCATCAGCCCGATTGTTCGGTCCTCGGCAATCGGACGAATATTTCTTCGAGAGCGGATAACAAGcaaGCAGTCTGCAAGGGCCCTGGATGGCGGAGGTGGAAGCGAGAAACGCTGGTATACAGGATCGCAGGTATGAAAGGGAAGGAACCAAAAGGAAAAGAGTCGAGATACAACACCAGAGGGCCACCGCGAGTGCGAGAAGGACAGAAGAAGGCCGTTCGGCAGAGCACCTCTATCGATAGCAATCCTTCGAGTCCTGCGAGTATCGGTGGTCGTAAGGAAACGAAGGGTCGACGGAAACAGAGCTACCCTAGCAAGGCGCCAACGAGTCCTGGCGTTGTCAACTATCCACAGGAGTCGATGGAAGAACAGGCACAGGACTTTACCGCTTGGACGAACAAGATCAAGGGAAAGTTGGACGAACAGAAGCCGCAGATAGACCAACAATCCGGAATCGTGAAAAAAGTCGACATGTCCTGTACGAATTGTGgcacgatgacgacgacgatcTGGAGGCGAAACATGAAAGGGGAGATGGTTTGCAATGCGTGTGGCCTTTATTACAAATTGCACGGCGTCAATCGTCCGGTAACGATGCGCAGAGACACCATACACACGCGTAGACGCAGGCCCAAGGGCGAAAAACCTACCAGGCATCGAAAAAAAGAACCGACGGGAGTACCAGCGCAGCCCGATCAGATGGACGCGGAGAGCGCGGACATGTTGGCCGCACTTCGACGCCAAATTCAACCGCATCTGATGATGGCCGCACTGACATCACCGCAGGTCCCCTCCGTCCGTGGCTCCATACCCGGAGCACCTTTAAATTATTCGATTCCCCTTACTAGTTTTATGATGCACCATGTAAAGTCGGAAGATCGAGAGCATCCGCGACATCACATGGAAGACATGGACGACACGCAGGACGGCGACGAGGAGAACATGGCGGACGCGCCATTGAACCTGGTCGCGACGTCCTTGGCGGAAGAAGCGCACTGA
- Protein Sequence
- MFNVPPKFYDLCRLCLSSDGVKLSIFEEEGTQRNFADKILTCLSITISLLSRLTPLSIPPQLFVLPSIDILPEGTSSDSILWDPICPLAKYSFAPRDKLKINAARRALQFASWPVGNDTLLLTGERWGHAATDHLSQEKSFSTAKAADLSPLQSFLQLNKTLFNDEPNSPASINQNVIPQTQTHHLELRSEQPNDQGNVKCELDDDTCSNSSDPDRLEIEDRDDQESDGEENGYDMTVRKRVKLENSYESSKRSTPDTSPIDRMDTPESNCSDIQVDQETTKLWQALASNRSLEITRTNGDKVNNGFSGEATNLLRTLINNRQIGITAIDGDNRTSPPQIRFYRDTQGTTLERHQPDCSVLGNRTNISSRADNKQAVCKGPGWRRWKRETLVYRIAGMKGKEPKGKESRYNTRGPPRVREGQKKAVRQSTSIDSNPSSPASIGGRKETKGRRKQSYPSKAPTSPGVVNYPQESMEEQAQDFTAWTNKIKGKLDEQKPQIDQQSGIVKKVDMSCTNCGTMTTTIWRRNMKGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKPTRHRKKEPTGVPAQPDQMDAESADMLAALRRQIQPHLMMAALTSPQVPSVRGSIPGAPLNYSIPLTSFMMHHVKSEDREHPRHHMEDMDDTQDGDEENMADAPLNLVATSLAEEAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -