Basic Information

Gene Symbol
Trerf1
Assembly
GCA_030407085.1
Location
CM059582.1:201696157-201710499[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-09 6.9e-06 28.4 0.0 2 46 913 957 912 957 0.96

Sequence Information

Coding Sequence
ATGGTTGGTGCGATAAGCGTTAGTAAAGTACTGGAAGGCACGCGAACGACCGATGAGAAGTCGACGCGATCATCGGAAATGCGCGGACTAGGAGATCAATATTCACGATACGGATGCTACGTTGAAGACAGAGTTCAATTCCCGTTTCAGGGTACCGAACCTGACGTACGTAACACCAACCGTATGCAGACCGGTGCACACCGCATCCAGACTCGTACATATACAGGAATTACGTGCACGGGAACAGGATCGGAGGTGATTGCGGTGCTCCCAGGTTCGGGGGAGGACGCCGAAAACAAAAAGAGCGAGAAGAAGGAAGTTGCCGGACCACCGCTGCAGACGGCATCGGTGAGCGTGCGCGCTCTGATCGAAGAGAAGATCATCCAGAAAAGGACGACAGCAACTGATGCTAACGCAGTTCAGCAATTGCGGTCGAGCACCAACACTTACGCTACCCAAAATGCTGAAAACGTGTCGCACGTCGCTGGGAAAACGAATTTCGCGGTACCGGCACCTCCGCCACTCGCATCGAGTGAAAAAATTCGTCGGCTTTCGGAAAGCGAACATTTTCGCCAACCGAACGTTACGATCACGGGGCATGCATCGGTCCAGAAGCAACTCCAAGAAGCTCAAACTCAAGCTCAGGCTCAGGCACTTGCTGATATGATACTCAAGGGAACTACGAAAATGGCAGTGAAAAGAACAGCGTCGGAACCTACGCAAAGGGTACAGCTCACTTATCAGTCTCCTGTTCCGCAGTCAACTACCAGTCAGAAGCAAGTCACTCAAAACCAAACGCAGTCGCAGGCGACGACGGAGACATTCTCGATGGCTGGATACTCGGAGGATGGGGGATATTTCAGCCCCAGTTTACAGGACGAGGTGTTTCAGCAAGTCTCATCTGTGACGGACAGTGTCTTACTTCATGCTTCTCAATTGGATGTTATTCAGTTTCAGGCATCAGGATTATTACAAGAACAATCCACGACCGAGCAGTTACAAGATCTTGCTCTCGAAGACCGCTTTTCCTCTCATCAGCACACAGCTAACTCTGATCTTCAGGCCCTGGTTAATTCACCATTACCAGATTCACTAGCAGAGTTCAGCACATTTGGAGCTCAATATACGGAAAGTCCACACACAATACCTGCACAGTCACCCTTGCCATCGCCGCTAACAAGACACGATAGTCCCAGCTTTACATACCCTACACCACCTGCTAGTCAGGAAGGACTTCTTAGCGCGACTTTGCCGTTACTCAGTCCTCAAGATGATTCCGAAACCGTGCGATCGGTTTCCTCGCCACTCTCGGCAGCATTTTACACTACCACCATGTCTTCCGCGGCCGCCATTGAGGAGGCCCTCAGCGAAGTTCTTCCCGACGAATCCGACGCGGATGCGGATATCTACGGGTCGGGTTCACCCACTCCTCATTCGCCACTGCCAAGTCCATTGTCAGCTACGCCAGCTCCGTCGCCTCTCTCTTCCTTGCCGCCATCTTCGGTTTCTTCCCCCGGACCTGGTAGCTTTTCCACTTCAACGTTTCCCATGTCTCCGCACCATGCGCTTCAGAACCAAATGATGCCGAACTCGGAAGATCCTCTTTTGTCTTCCAGTCCGAAAGATTTTGCCGCAGGCCGTCGTAAATTCGAGTTTCAATCTTACAAATTGCTCACCAGTCAGAACATTGTTGATTTCGGTCTCGGTAATGGTAGCGTTGCTGGAATCGTTGTCGACAATAACGGCGAGCTTAAGTTGATCCAAGCATCTGGGTTGCAAAAGGCGAATGTTTTTGTGCAAGGCGGTGGTACCTTGAGTCCCGCTCTTGCGTTCAGGAAAGAAATTCGAGTGGCTGCTCCAAAAGTAGAGCATAATACCATGAATCCACAGAATTCGAACATCCATTCATATCAAGCACAACATCAGCATGAACAGCAACATGTTCAAGCCCAGCCACATCCCCTCCAGCAACAGCAGCAAGAACAGCAGCACCTTCAACAAGCCATCAATCCAGCAAAATTTCTCATTCAATCAAATCAAACAAACAGGCCAGGGCTTAAGCATAAGCAAGCAGGATTTTTGCCAGTTCCCGTAGAACAAATCAAAGAAGAATCGTTGGATGATGACGGATTCCTGAGTCCCAGCTATATTAATACCACGGGTAGTCCCGCAAGGTATTGCAAGAAAAGGCCTAGACTCGAAGGACATTACACGAACAGTTCACATTCATACCCGTCGAGACTGAGGCGGGCGTGTGATCGTCATTGGGACAGCAGTTACACTCCTCCACCGATTCTGGATCCATCACGACCTAGTCCTGGACTTTACGCAAGGCTACATCAGCAAGAACGTGAATACTCCACCGACTTCAGCTCTGATGATTCCCAAGGGACTGATGGGCCACCGCCTCGAATCAACATTGGCACAAAGTATCAAGCTACGATACCCACGATTGCTGCTTGCGATGGTGACTTGGGTAGAGGAGGACCTGAAGTTACCGATCACCTTCTTTGGGATCCTGGCATAAATAATCTTCTTACCGATAAAGAATTGGAAATGTATCTGCAATTTGCCTGCTGTGCAGCTGTTCCCGGCGGTGGAAGGAATAAGGAGTATGCGCTTCATCTCTTGCATATGTGCAAGGGCAATATACGAGAAGCGATGTTGAAACTGATGAGACCAACGCCTCTGCTGCCTCTGAATCATCCATTATGCAGCTACGAGTGCCGCGAGTCGGACAGGTGGACATGTCTGGAGATGGACACGTTCTATCAGGGTCTATTGAAGTACAACAAAGACTTTTCCGGAATTGCGCGAGACGTGGGTAGCAAAACCACGAAACAATGCGTGCAATTTTACTACCTGTGGAAACGTCTCTGCCCAGAAGAGTACAGGAGAATGCGCATGCGCCATCTTAAACCAAAGATCCAAACAGAATACACCACCAGAGAAGGAAGGGACACGAAAGATACCAAGGAGCTGCGAGACGCAATAGCATCCGTCAACGAAATGGATTTTAGCGAGGGAAAGTCGATTCTTCATCGAACTTTACTGCAAACGACGAACGAAGGGGAAAACTCTGCTACTCTTACAACCAGTGAAGGAGAGTTGCGGCTGTTCGCTTATGACTTTCATGATAGCTTTAGCGGAAGTGTAACAGTAACGATGGCCGGGAGCACCCAAACCGCCCAAGTCGGCAAAGCCGACCACGCCACAGTCTACACCAACTCACAAACTCACACTAGTTCCGAGCAACAACTACCCGCGCCCACCCCACTTCATTACCCCTGCAAGATTTGCGGGAAAGTTTTCAACAAAGTGAAAAGCAGAAGTGCTCACATGAAGTCTCATCGGCCAATCCCATCGCTCGATTCAACGGGGCAAGACTCTAAACGCTCCGCacagcaacagcagcagcaacagcagcagcaacagcagccTCAGGAGCAGTCGAATTCGCAGCCTCGACAACAACAGCAATcacagcaacaacaacaacaacaatacaAGAGGAACGCGATACCACAAGACTATCCGCAACAAATCTGCCCCAGCAACTGCGACGCTCAGAACGCGACTCACGTATGGCACAATCCAACCAGACTCAGACCACCATAG
Protein Sequence
MVGAISVSKVLEGTRTTDEKSTRSSEMRGLGDQYSRYGCYVEDRVQFPFQGTEPDVRNTNRMQTGAHRIQTRTYTGITCTGTGSEVIAVLPGSGEDAENKKSEKKEVAGPPLQTASVSVRALIEEKIIQKRTTATDANAVQQLRSSTNTYATQNAENVSHVAGKTNFAVPAPPPLASSEKIRRLSESEHFRQPNVTITGHASVQKQLQEAQTQAQAQALADMILKGTTKMAVKRTASEPTQRVQLTYQSPVPQSTTSQKQVTQNQTQSQATTETFSMAGYSEDGGYFSPSLQDEVFQQVSSVTDSVLLHASQLDVIQFQASGLLQEQSTTEQLQDLALEDRFSSHQHTANSDLQALVNSPLPDSLAEFSTFGAQYTESPHTIPAQSPLPSPLTRHDSPSFTYPTPPASQEGLLSATLPLLSPQDDSETVRSVSSPLSAAFYTTTMSSAAAIEEALSEVLPDESDADADIYGSGSPTPHSPLPSPLSATPAPSPLSSLPPSSVSSPGPGSFSTSTFPMSPHHALQNQMMPNSEDPLLSSSPKDFAAGRRKFEFQSYKLLTSQNIVDFGLGNGSVAGIVVDNNGELKLIQASGLQKANVFVQGGGTLSPALAFRKEIRVAAPKVEHNTMNPQNSNIHSYQAQHQHEQQHVQAQPHPLQQQQQEQQHLQQAINPAKFLIQSNQTNRPGLKHKQAGFLPVPVEQIKEESLDDDGFLSPSYINTTGSPARYCKKRPRLEGHYTNSSHSYPSRLRRACDRHWDSSYTPPPILDPSRPSPGLYARLHQQEREYSTDFSSDDSQGTDGPPPRINIGTKYQATIPTIAACDGDLGRGGPEVTDHLLWDPGINNLLTDKELEMYLQFACCAAVPGGGRNKEYALHLLHMCKGNIREAMLKLMRPTPLLPLNHPLCSYECRESDRWTCLEMDTFYQGLLKYNKDFSGIARDVGSKTTKQCVQFYYLWKRLCPEEYRRMRMRHLKPKIQTEYTTREGRDTKDTKELRDAIASVNEMDFSEGKSILHRTLLQTTNEGENSATLTTSEGELRLFAYDFHDSFSGSVTVTMAGSTQTAQVGKADHATVYTNSQTHTSSEQQLPAPTPLHYPCKICGKVFNKVKSRSAHMKSHRPIPSLDSTGQDSKRSAQQQQQQQQQQQQPQEQSNSQPRQQQQSQQQQQQQYKRNAIPQDYPQQICPSNCDAQNATHVWHNPTRLRPP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01489325;
90% Identity
iTF_01489325;
80% Identity
-