Tdro022984.1
Basic Information
- Insect
- Trichopria drosophilae
- Gene Symbol
- -
- Assembly
- GCA_030407085.1
- Location
- CM059582.1:184949020-184961058[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.4e-11 1.2e-07 33.6 0.1 8 38 7 36 6 40 0.96
Sequence Information
- Coding Sequence
- ATGGGCGGGCCACCGCACGCTCTCGATGCAATCAGGACTGGAGTATCTTTAAGAAAAGCAGCAGCAGCTTATGGGATTTCTGCAGCCACTTTGCATAGGCACAATAAAAATCCCGgtttagtaaaattgaaaactgGACCTCCAACGATATTGACGGAAtctgaagaaaaagaaattgagAAATGGATAATTTACAGAGCAGAAAGAGGTTATCCTGTCACTAAAACTGAGTTGCTCGATAATGTTCAGCAATACGTGATACGATTGAAAAAGACAACTCCTTTTACTGAAGGTAGACCAAGTCGACATTGGCCTAAATCAGGTGGTGGAAAGAGATTGTATTCAGACATGTCTGATTTGGAACCCGTTCAGTGTTATAAGCACTCATGTAAGCGTTTTTTATCAGGTGCCCTAGACAGCACATGCTCAGGGCACGTTAAGATTATAATCCgtcaaaaaaatacaattcgaTCTCTTCAGGCTGCATTCAGTCTCGCCTGTGGCAATGATGACGACGATAGCTGTAACATTGACgttgacgatgatgatgacgctGATGTTGACGTTGACTGTGGTGATGGCGATTACGTTGACGTTGACTGTGGTGATGGCGATTACGTTGACGATGGCTATGACAACTATGTCCAAAATGATGACTACGTCGATTACGACGAAGATGACAATGAAGATGAGGATAGCTgtaatgatgataatgataatgacTACATCTGTAGCGAGACGTTGACGAAAACGGTAAACGGTGACGACGAcaatgatgatgatggtgaCGATGACAATGATGGTGACGATGACAATGATGATGACGGTGACGATGACAATGATGATGACGGTGACGATGCCAATGATGATGACAGTGACCATGACAATGATGATGACGGTGACGATGACAGTGATGTTGACAATGGCGATTACGTCGAAGATGGTGATGACAATGACAATGACGATGATGATAGCTGCAACCATGACATTCACAACAACGGTGATGACAAAGATGACAGTGACGATTAG
- Protein Sequence
- MGGPPHALDAIRTGVSLRKAAAAYGISAATLHRHNKNPGLVKLKTGPPTILTESEEKEIEKWIIYRAERGYPVTKTELLDNVQQYVIRLKKTTPFTEGRPSRHWPKSGGGKRLYSDMSDLEPVQCYKHSCKRFLSGALDSTCSGHVKIIIRQKNTIRSLQAAFSLACGNDDDDSCNIDVDDDDDADVDVDCGDGDYVDVDCGDGDYVDDGYDNYVQNDDYVDYDEDDNEDEDSCNDDNDNDYICSETLTKTVNGDDDNDDDGDDDNDGDDDNDDDGDDDNDDDGDDANDDDSDHDNDDDGDDDSDVDNGDYVEDGDDNDNDDDDSCNHDIHNNGDDKDDSDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -