Basic Information

Insect: Trichoplusia ni
Gene Symbol: ZNF296
Assembly: GCA_003590095.1
Location: NC:15748750-15762283[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.21 11 6.5 0.3 3 23 104 124 102 124 0.96

2 14 0.0036 0.18 12.1 4.9 1 23 286 308 286 308 0.99

3 14 0.00099 0.051 13.8 0.4 1 19 314 332 314 337 0.90

4 14 0.059 3 8.2 3.3 1 23 342 364 342 365 0.95

5 14 8.6e-06 0.00044 20.3 0.5 2 23 551 572 551 572 0.98

6 14 0.00011 0.0059 16.7 3.6 1 23 578 600 578 600 0.98

7 14 0.15 7.9 6.9 4.4 1 23 667 689 667 689 0.97

8 14 0.0043 0.22 11.8 2.3 1 23 724 746 724 746 0.95

9 14 0.0005 0.026 14.7 1.5 1 23 752 774 752 774 0.98

10 14 0.89 46 4.5 6.1 1 23 782 804 782 804 0.98

11 14 0.0018 0.093 13.0 3.3 2 23 843 864 843 864 0.96

12 14 0.014 0.71 10.2 4.7 1 23 881 903 881 903 0.96

13 14 1.4e-06 7.2e-05 22.8 0.7 1 23 909 931 909 931 0.98

14 14 1.7e-05 0.00086 19.4 5.3 1 23 937 960 937 960 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.21	11	6.5	0.3	3	23	104	124	102	124	0.96
2	14	0.0036	0.18	12.1	4.9	1	23	286	308	286	308	0.99
3	14	0.00099	0.051	13.8	0.4	1	19	314	332	314	337	0.90
4	14	0.059	3	8.2	3.3	1	23	342	364	342	365	0.95
5	14	8.6e-06	0.00044	20.3	0.5	2	23	551	572	551	572	0.98
6	14	0.00011	0.0059	16.7	3.6	1	23	578	600	578	600	0.98
7	14	0.15	7.9	6.9	4.4	1	23	667	689	667	689	0.97
8	14	0.0043	0.22	11.8	2.3	1	23	724	746	724	746	0.95
9	14	0.0005	0.026	14.7	1.5	1	23	752	774	752	774	0.98
10	14	0.89	46	4.5	6.1	1	23	782	804	782	804	0.98
11	14	0.0018	0.093	13.0	3.3	2	23	843	864	843	864	0.96
12	14	0.014	0.71	10.2	4.7	1	23	881	903	881	903	0.96
13	14	1.4e-06	7.2e-05	22.8	0.7	1	23	909	931	909	931	0.98
14	14	1.7e-05	0.00086	19.4	5.3	1	23	937	960	937	960	0.98

Sequence Information

Coding Sequence: ATGAACCCGACAACCCTGCCATCAAATATGGACATTGATCCACTGAGCTACGAATACCCTGGCTACAGCTATCCGCACCCAGCACAGTACACATACCCAGTGAAGGACGAGACATACTACCAGAACTACGTACCCAATGGCCACACGGACTACAAACAACTCACACCATTACAATCTAAAGAGGAGACCGATAACAAACCAGAAACTAAAGACGTCAAAACGGTACCAACGAGAAGAAAAAAGGATAAGCGTGTTAAAAGTGCGTACTGTTCTGAGAAGATAACGGATGAAGGGTTCCCGTTCTACGGTTGCTCTGTCTGCAACATCAGCTATAAAGCCTTACATGAACTAGATCAACATGTTACCATACACAAAAATAGAATGACAAGCTACCGTCTAAGACTACGGaaccaatataaaaagaaacaattaaaaaaggaaaagaaacgCTTAAAAAAGATTATAAAGAAAGAAATGTCTATAGAGATTGAGATTAAACCGGAGGACGGGTATATAGGTAACGAGAAAGCATCTGACTTTATAAATCACAATGAACAAAGACCTGAATTCCACGGAGAAGATACGAAGAGTGGAATatcaaatgttaatttaagtCTTAATACTAAAAGTAACGATAATGGattgaatattaatagtatAAGTAATGGGAACGTTGTCAATGTTAGTGTAAGTGGTAACGGAGTCAACGGGGAGAATGTTAGTAAAGATAAGGGTATAAATAGTGGTAAAACAAGTCATGGTAGTAATGGTGTGAGTGAGACCAACGGGAAGGCAGCGAGTGATAACCGTAACAGCAAGGACGAAGAGAGTGAGTTGAATAACTTGGAGAAGATCTATAAGTGCTTCGCTTGCCACAAGCAGTTCACTCTGAGTTATTATTTGAAGTTGCATGTCAGATCACATACAGATGAGAAGCCATACAAATGCAACGCGTGCGGCCAGTCGTTCATAACGGCGAGCAAGCTCGGTCGCCACGACAAGCGCATCCATCAGACAGCGCGCTTCCAGTGCAGGATCTGCTTCAAGGTGTTCCTCAGGTTTGACCTCCTGACGGCCCACTTCGACAAACATCACCCCGAGGACAAGCTGGATGGAGAGCCCTACGACTACAACGCCATCCTCCCCTACCTCAAAGAGTTGGAGGAGCAGCTCGCGCAGCAGGAACAGAAGCCGAAGGTCGAGGACCTGTGGGGGGAGGCGCCCTGTGGGCCGCAGCAGGTGACCTTGTGCGAGGACACCGGCGAGGTCAAGGTCGAGGGCTGGGGAGAGCCGCACTGCGTCGTGCTCACCGAGGATGTCAAGGAGGAGACACCGGACGAAGATCAAAAAGACGTTCTCCCGAAACTGAGCATAGAAGTGAAGGTGGACTTCGACGATCTGAAGGTGAAGCAAGAAGTGTCAGAAGAGGAAGGGGGAGAGCCGGGAGTGGGAGGGGGAGACGGGGGAGACGGCGCCATAGAGATAGACATACCCATGGACAATGATGTGAAGGCGGAAGACAGCGCATCCGACGAGGACTACTTCCCGTCGAACACGTGGGCGGTAccccccgcgccgccgcccccCTCTCCCCCCTTGTCGGGGCCCCGGCGGCGCGGGGGAGGCCGCGCGGGGCCCGGCGGGGGGGGAGAGTGTCCCGTCTGCCACAAGGCGGTCAGCAGCGCGTCCTACATGCGCGTCCACATGCGGACACACACCGGGGAGAGGCCCTTCAAATGCTACAAGTGTGGGCGGGGGTTCATCACAAGCAGCAAGATGCACAGGCACGTGCTCACGCATCAGGATGACAAGGAGGGCGACGTGAAAAAGGAGGGGGAGACTCAGGCAGAGGGTGAGAGCAAGCCAGAGGGGGAGGCCATCGATGAAGACGACCAACCTCTCAAGAACATCAAATGTAAGAAGCGCGGCAAGTCCAAGGCGAGTAGCAAGCTCTCCCCCGGCGAGGCCCCTCCCCCCCGCAAGCACCAGAAGCGGCCCCACTCCTGCGAGTACTGCAACCAGAAATTCCTGCACCTGAACATGCTAGAGGTGCACCGTCAGAGCCACGCGGGCGAGCAGCTAGTGTTGCGCTGCCAGTACTGTCTGCAGGAGCAGCCCGACAGCGCAGCCCTAGCCGAGCACGAGGCCACGCACTCCGGGCCCAAGCCCTACCTGTGCACCCTGTGCGGGAAGACCTACAAGAAGAGGGAGACCATGGTGTACCACCGCAAGCAACACAAGTCGCCGCCCTCGTTCGTGTGCGACGTGTGTTCGCGTCGCTTCTCCGCCGCGTGCAAGTTGTCCGCGCACCAGCGCAGTCACCGCGCGCGCGTGTTGCGCCGCTACGAGTGTCCCGTCTGCGCGCATCTGTTCCACACCAAGTACCACGTGCACATGCATCTCGCCACGCACCAGAAGGAGGGGCTtATCCAGGAGCAGCACCGCGGGCAGGTGCTGGCGATGGCGCTGCAGAACGCGCGCCCCCTCCCCGCGCCTCCCCCCGACACCAGCGACGAGCGCTCGCGCGTCTGCAACATCTGCGGGGAAGTCTTCCACCACTTCTTCCACTTGGAGGAGCATCTCAAGGGGCACGCCGCCAGCATCGCCGTCGAGGAGCTAGACAAGCCGGCAGACAAGAAACACGTCTGCCCCCTCTGCAACAAAGGCTTCAAACTCCATTACTACTTAAAGTTGCACAGCTTCACCCACTCGAAGGAGAAGCCCTTCATCTGCCAGCAGTGCGGGAAGGGCTTCATCACTAAGGGCAAGCTGAAGCGCCACCTAGAGACACACACCGGCCTCAAGAAGTACCAGTGCCACATCTGCTGCAAGTTCTTCACGAGGCCGAGCTACCTCCGCATCCACATCCGCACCATACACGGCACGCAGGACTACAACTTCCGCCTCCAGCCGCCGCTCGCCGCGCAACTATAA
Protein Sequence: MNPTTLPSNMDIDPLSYEYPGYSYPHPAQYTYPVKDETYYQNYVPNGHTDYKQLTPLQSKEETDNKPETKDVKTVPTRRKKDKRVKSAYCSEKITDEGFPFYGCSVCNISYKALHELDQHVTIHKNRMTSYRLRLRNQYKKKQLKKEKKRLKKIIKKEMSIEIEIKPEDGYIGNEKASDFINHNEQRPEFHGEDTKSGISNVNLSLNTKSNDNGLNINSISNGNVVNVSVSGNGVNGENVSKDKGINSGKTSHGSNGVSETNGKAASDNRNSKDEESELNNLEKIYKCFACHKQFTLSYYLKLHVRSHTDEKPYKCNACGQSFITASKLGRHDKRIHQTARFQCRICFKVFLRFDLLTAHFDKHHPEDKLDGEPYDYNAILPYLKELEEQLAQQEQKPKVEDLWGEAPCGPQQVTLCEDTGEVKVEGWGEPHCVVLTEDVKEETPDEDQKDVLPKLSIEVKVDFDDLKVKQEVSEEEGGEPGVGGGDGGDGAIEIDIPMDNDVKAEDSASDEDYFPSNTWAVPPAPPPPSPPLSGPRRRGGGRAGPGGGGECPVCHKAVSSASYMRVHMRTHTGERPFKCYKCGRGFITSSKMHRHVLTHQDDKEGDVKKEGETQAEGESKPEGEAIDEDDQPLKNIKCKKRGKSKASSKLSPGEAPPPRKHQKRPHSCEYCNQKFLHLNMLEVHRQSHAGEQLVLRCQYCLQEQPDSAALAEHEATHSGPKPYLCTLCGKTYKKRETMVYHRKQHKSPPSFVCDVCSRRFSAACKLSAHQRSHRARVLRRYECPVCAHLFHTKYHVHMHLATHQKEGLIQEQHRGQVLAMALQNARPLPAPPPDTSDERSRVCNICGEVFHHFFHLEEHLKGHAASIAVEELDKPADKKHVCPLCNKGFKLHYYLKLHSFTHSKEKPFICQQCGKGFITKGKLKRHLETHTGLKKYQCHICCKFFTRPSYLRIHIRTIHGTQDYNFRLQPPLAAQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -