Tni014413.1
Basic Information
- Insect
- Trichoplusia ni
- Gene Symbol
- Zfy1
- Assembly
- GCA_003590095.1
- Location
- NW:44588-54570[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.02 1 9.7 3.8 2 21 154 173 153 174 0.93 2 28 5 2.6e+02 2.1 1.1 1 23 180 202 180 202 0.89 3 28 0.0019 0.097 12.9 1.4 1 23 207 230 207 230 0.96 4 28 0.0036 0.18 12.0 1.6 2 23 236 257 235 257 0.95 5 28 0.29 15 6.0 3.0 2 21 261 280 260 281 0.93 6 28 0.0027 0.14 12.5 0.5 2 23 324 346 323 346 0.95 7 28 10 5.1e+02 1.2 0.4 3 23 354 373 353 373 0.83 8 28 0.0056 0.29 11.4 0.7 1 23 379 401 379 401 0.98 9 28 0.035 1.8 8.9 3.6 1 23 407 430 407 430 0.96 10 28 0.027 1.4 9.3 0.6 1 23 439 462 439 462 0.92 11 28 0.025 1.3 9.4 8.3 1 23 472 494 472 494 0.98 12 28 1e-06 5.3e-05 23.2 0.8 2 21 750 769 749 770 0.94 13 28 0.0015 0.078 13.2 2.8 1 23 801 824 801 824 0.93 14 28 0.016 0.82 10.0 2.9 1 23 829 851 829 851 0.95 15 28 0.00016 0.0083 16.3 1.1 1 23 889 912 889 912 0.93 16 28 5.7e-05 0.0029 17.7 1.0 1 23 918 940 918 940 0.97 17 28 6.2 3.2e+02 1.9 0.2 5 23 950 968 948 968 0.95 18 28 2.5 1.3e+02 3.1 2.0 1 23 974 997 974 997 0.90 19 28 0.012 0.62 10.4 1.2 2 22 1123 1143 1122 1146 0.89 20 28 0.21 11 6.5 0.0 3 23 1150 1171 1149 1171 0.95 21 28 0.022 1.2 9.5 1.3 1 23 1176 1199 1176 1199 0.95 22 28 0.00014 0.0073 16.4 1.6 2 23 1205 1226 1204 1226 0.96 23 28 1.5 78 3.8 1.2 2 20 1230 1248 1230 1250 0.91 24 28 4.8e-06 0.00025 21.1 1.2 1 23 1276 1299 1276 1299 0.95 25 28 0.00048 0.025 14.8 0.5 1 23 1305 1327 1305 1327 0.95 26 28 0.11 5.5 7.4 0.1 1 23 1333 1355 1333 1355 0.97 27 28 0.0056 0.29 11.4 0.3 1 23 1361 1384 1361 1384 0.94 28 28 0.00019 0.0099 16.0 0.9 2 23 1391 1413 1390 1413 0.95
Sequence Information
- Coding Sequence
- atgagCCGGCAAGTAGATATTAAGGCTTTAGTATCCCATATAGTGCGTGGCGATGGCTCGGATAGATGCCGAATATGTATGGGAGATACGACGGAGGGCCAAGTTCATTTAGAAGACACAGTTATGATGGATGGAGACAAACCTGTGACGCTCGCGGAACTGCTAGAAGTAATCACAGGAGTCGAGGTGCGGCTGGACGAAGACCTGCCCTTAGGGCTGTGCTCCCTATGCTCGGTATCGGCCCTCCAGGCAGCGGACTTCAGGACCCTATGCCGCCAGGCCAACTCCCAATGGGACACAACCATCCAACTCCTCAACAGCATACCAACGCAAGgaaccaacaaaaaaataatggctaTCCTCACAGATAACACGATCACAGTTACCGAGCAGGAGGAGAAAGAGGCCCCAAAAGTCAAAAAGAGGACTCGCTGTGAAAATATAAAGAATCATAAGTGCCAGTGTCCTGGATGCGGTAAGAGGTTTCTGTATGCCCAACATTTGTGCCAACATTTGAAGGAGTCGTCCAATAACCAACATGCGTGTCATATTTGCGCTAAAATTATGACCAGAGAAGAACTGATCACGCATTTACAGGAGACTCATAATAGGGAGCCGTATGACTGTAAGAAGTGTCCAGCCATGTTCAGGTCCTACAAACAGTATAAGGAGCATTTATCGAAGGCCCATGCGTCTGGTGCGTGCACTTGTGGGGAGTGCGGACGTAACTTTCAAAGCCCACACGCGTATTACGCCCATCTCTCAGTACATACCCCAAAAACCTGTCCTGGGTGCGACGAGTTATTCAGAAATCAAAAATGCTATCATTACCACGTCAAGCGATGTTGTAATCTCGATAAAACGCGTTTAGATACACACAAGACCAAAAATAAGGTCACAATTACGGTAAATAGaaggaataataaaagtattaaagttGGCATGCGGGGTAGTACTGACTCAGAATGCATTTGCGACTATTGCAACAAGACATTCGCTGGCAAGAAGTTTGTCGCCGCTCACATACAGATCGTTCACACGAAGAACACACACAGACCTTGCGTTTACTGTGGGAAGCTACTCGCGGCCGCCCACATGACGACTCACGTGAAAAAGCACGAGTCGAAAGAATCGTTCCAATGCGGGCATTGTGGCATCATTCTGAAAACCAAGCTAGGATATATACAGCATCTAAGACTGCATACAGGAGAAAGGCCGTATACCTGCAAATTCTGCGGCGAATCTTTCTCAGCGTCTTCTAGACGCTCAGAACACGTTCGGAAATGTCATAAAGACTCGGAAATCGTTCTGAAACACGCTTGTGAGTTTTGCCCGGCGAGATTCCGACTGCCGTACCGATTGAAGAAACATGTCAATGCGGTACATGGTGAAGGCAAAGAGCAGTTGTTGCAATTCGAGTGTAATGTGTGTCATCAGAAGTTTAGCAGCTGTCGGGGGTTGCTGCATCATAGTAGGAAACATCAGGATGATGGGACGACTCCTCAGATTCCAAGGTTGAACGCCGTTGGGGGGAAAATGGTGGAAGTCGAGATCACACTACCGCTGCCTAACAAACTCTGCGGCCGGTGCAAACTGGACTTAACATCGATAATACCATTTATAAAACTGTGCAAGGAGTCAGCGAAACGCTGGAACGAGATGTCAGACTTTTTGAACGATCTGACAACGTCTCACAAGACCAAAAACCTTTATATCGAAATCGGGAAAGAAATTAGGACTTATACAGATACGTTGAGATGTCCCGTTAAGAAAATAACGTCGCGTAAAGAGGCGCTTAGCTGTTTCAAAATTAGACTCCGTCAACAAATGGTTTATAGAAACCGATTGGCTGATGATAAGAAAGACAGATTTTCACCACAAAGCGAAGACAAGAACCGCAAAATGACTTGTACCGAATGTAAAATGGAGCTGGACCCCGCTCTGCCCTGCGGCATATGCAGGCGCTGCTCCGACGAGACCATCGCAGCCATAACCTTCAGGAACCTCTGTGCGCAGTCCGCACACCACTGGCAAGAGACCTCCGCCACCCTATCCGACATATACCCGCCAACACCAGAAGACAAAGCGTATTTCATCTTCTGTCAGAAGGAAAACACAATCGTTAAAGACCAAATAGATAGGGTTCCCACTATACAAGATGCAGTGGAAAGATTGAATAACGGGTATCAGATCAAACGAGAACGGAAGAGAAGAACTAAGCGCTCGCACGGCGTCCACGTCGCCTGCAAGTGTCCCGACTGCGGCAAAAGGTTCTCCAGACCTGAATATCTGAATATACATCTTAGGAATACGCTGAACAGAGTCTGTAGACATTGCTGTACTATTGTACCGAAGAAAAAGCTAGCTAAACATCTCGAAGCTCACCATGAAGTCGTAGTTTACGATTGCAGCTTCTGTCATAAGCTGTTCAAAGATACATCAGGTTTGAAACAACACATGGATGAGTATCATGGCGAGAATCCACATCATTGCAATGTCTGTGGCAACGCGTATACAAACGAGAGGGCTCTGAAAGCTCACGCTCACTCCCACTCCTTATTCCACTGCACCTGTTGCAATCTGAGCTACGAGAACATCAAATGCTATAAGTACCATCAGAAAGTCTGCAAGATTAACGACCGTCCCTCGGTCCAGTTTCAGCAATTCACTTGCGATCACTGCGGCGTCACTTACAACAGAAAACCCTCGTTAAGAATACATATAGTCCAAAAACACCTCAACGTTTTGCCCTACGTATGCCAGATTTGTGGAAAGCGCACCTCTACGTTAGCGCATTTGAAATCGCACGAGACTGTCCATAAAACGGAGAGGCAAATTTTCCAGTGCTATTGTGGAGCGAAGCTGAGGACTGAGCTAGGTTACCAGTTACATTTGAGGATCCACACTGGAGAGAGGCCTTATGAGTGCGAGCATTGTGGTGATAGGTTCCTGTCGTCATCGAGGCGTCTCGATCATATTAAGCGGAGGCATCGTGGCGCGAAAGACTTTAAGCATGGTTGCGAGCAATGTCCGGCTCGATTCATGAAAGAGGAATCCCTCGTACCGATCGGCGCGTGCGTCGCCTGCGCCAGCACAGCACTAGCCGCGCAAGAGTTCCGCGTCTTTGTGCGAAACTCCCAAAAGCTATGGCGGAAAGCCATCATCAACCTGGCCACCATACCCGCCTCAGCAACATCCCCCGTCAAATCAGTCTGCGCATTTGTGAAAGACTCGGACCTCTCCATCCAAACGTTCAAAGATTACACCAACAGTGACCCAAAAACTATACTGAACAGATTAAAAAATCGCGTCACAAAGAAAACTGTGGACAGAAAGCCGCGCGGGGCCCGCACAGGCCCCGCCTGCTCCTGCCCCGACTGTAGGAAAGGCTTTTTGAGCCCGTACTACTTAAATATGCATTTAAGAAACAGTGGCCATAAAGAAGCTTGTCTAATCTGTGGCTCGGTCTTCGTTAGAGGGAAAGAGATGCAAGATCATTTAGCCTCAGTACATAACGAGAAGGTTTATCTTTGCAAAAAATGTCCTATACTTTGCACGTCTGAAGCGTTATTAAAGAAACATGTGAAAAAGGCCCACAGTGCCGGCGCTCTGACTTGCTCGGACTGCGGCAGAACATTCCCCAGACACGCGTCTTTCGAAACTCATTCACAAATGCACGCAGTCAGGACTTGTCGAGCGTGTGGAGTACAATTCACGAACAGAGGATGCTACAGGGAGCACAGGTCCCAGTGTGAACCAGACGCGAAGCCCAACGCTCAAACTGTCCCTCGAAATAGACGCTCCAACATCAGAGACCCAGCCACCTTCACCTGCGACCATTGCGGCAAAACGTACAACTCCAGACCACAGCTCAAAAACCACATACTATGGATACATATGGACATCCGACCTCATCAATGCCAATGGTGTGGAAAGAGGTTTTACACTCCCGCGCGGCTGGCTGAACACACTGTTGTCCATACCCGCGTTCGAAACTTCGAATGTGACATTTGTGGCGCGAAACTTGTCTCCAAAATGGCCGCCGTGTACCACAGACGTCGGCATACGGGCGAAAGGCCGTACGAATGCGAAGATTGTGGGGAAAAATTCATTTCGGCGTCACGTAGATCTGAGCATGCCAAACGTAGACATAATAAAGGTTTTAGGTTACCGTGTATGAAATGCCCCGCGAATTTCGTTAGGAAACACGAGTTGAAAAAACATATGGAGAAAGCCCATAGGGGGCAGGAAAATGCCCTTGTCTGGCcttaa
- Protein Sequence
- MSRQVDIKALVSHIVRGDGSDRCRICMGDTTEGQVHLEDTVMMDGDKPVTLAELLEVITGVEVRLDEDLPLGLCSLCSVSALQAADFRTLCRQANSQWDTTIQLLNSIPTQGTNKKIMAILTDNTITVTEQEEKEAPKVKKRTRCENIKNHKCQCPGCGKRFLYAQHLCQHLKESSNNQHACHICAKIMTREELITHLQETHNREPYDCKKCPAMFRSYKQYKEHLSKAHASGACTCGECGRNFQSPHAYYAHLSVHTPKTCPGCDELFRNQKCYHYHVKRCCNLDKTRLDTHKTKNKVTITVNRRNNKSIKVGMRGSTDSECICDYCNKTFAGKKFVAAHIQIVHTKNTHRPCVYCGKLLAAAHMTTHVKKHESKESFQCGHCGIILKTKLGYIQHLRLHTGERPYTCKFCGESFSASSRRSEHVRKCHKDSEIVLKHACEFCPARFRLPYRLKKHVNAVHGEGKEQLLQFECNVCHQKFSSCRGLLHHSRKHQDDGTTPQIPRLNAVGGKMVEVEITLPLPNKLCGRCKLDLTSIIPFIKLCKESAKRWNEMSDFLNDLTTSHKTKNLYIEIGKEIRTYTDTLRCPVKKITSRKEALSCFKIRLRQQMVYRNRLADDKKDRFSPQSEDKNRKMTCTECKMELDPALPCGICRRCSDETIAAITFRNLCAQSAHHWQETSATLSDIYPPTPEDKAYFIFCQKENTIVKDQIDRVPTIQDAVERLNNGYQIKRERKRRTKRSHGVHVACKCPDCGKRFSRPEYLNIHLRNTLNRVCRHCCTIVPKKKLAKHLEAHHEVVVYDCSFCHKLFKDTSGLKQHMDEYHGENPHHCNVCGNAYTNERALKAHAHSHSLFHCTCCNLSYENIKCYKYHQKVCKINDRPSVQFQQFTCDHCGVTYNRKPSLRIHIVQKHLNVLPYVCQICGKRTSTLAHLKSHETVHKTERQIFQCYCGAKLRTELGYQLHLRIHTGERPYECEHCGDRFLSSSRRLDHIKRRHRGAKDFKHGCEQCPARFMKEESLVPIGACVACASTALAAQEFRVFVRNSQKLWRKAIINLATIPASATSPVKSVCAFVKDSDLSIQTFKDYTNSDPKTILNRLKNRVTKKTVDRKPRGARTGPACSCPDCRKGFLSPYYLNMHLRNSGHKEACLICGSVFVRGKEMQDHLASVHNEKVYLCKKCPILCTSEALLKKHVKKAHSAGALTCSDCGRTFPRHASFETHSQMHAVRTCRACGVQFTNRGCYREHRSQCEPDAKPNAQTVPRNRRSNIRDPATFTCDHCGKTYNSRPQLKNHILWIHMDIRPHQCQWCGKRFYTPARLAEHTVVHTRVRNFECDICGAKLVSKMAAVYHRRRHTGERPYECEDCGEKFISASRRSEHAKRRHNKGFRLPCMKCPANFVRKHELKKHMEKAHRGQENALVWP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -