Tni007594.1
Basic Information
- Insect
- Trichoplusia ni
- Gene Symbol
- kn
- Assembly
- GCA_003590095.1
- Location
- NC:9025664-9072046[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-240 9.1e-236 783.4 0.0 11 387 23 406 14 409 0.97 2 2 2.8e-07 0.0042 15.2 1.6 420 468 415 467 407 513 0.81
Sequence Information
- Coding Sequence
- ATGTTCGGCCTGCATCACCAAGAAGCCGCGGGCGGTCTGCACGCGCAGCCCCGCGGCCCCGTCACCTCGCTCAAGGAGGAACCGCTGACCAGGGCCTGGATGACACCAACCTCCTTAGTTGATAATACCAACAGTGTGGGGGTGGGTCGAGCGCACTTTGAGAAGCAACCACCCAGCAACCTGCGCAAGAGCAACTTCTTTCACTTCGTGGTTGCCCTCTACGATCGTGCTGGACAACCAGTGGAAATCGAGAGAACCGCCTTCATAGGGTTCATTGAGAAAGATCAGGAAGTTGAAGGACAAAAGACAAACAATGGCATCCAATACAGGCTTCAATTACTTTATGCAAACGGTATCCGACAAGAACAGGACATATTTGTTCGGCTCATCGACTCCGTCACCAAACAGcCAATCGTCTATGAAGGTCAAGACAAGAATCCAGAAATGTGCCGAGTTTTATTAACACACGAAGTTATGTGCAGTCGGTGTTGTGACAAGAAAAGTTGTGGAAACAGAAACGAAACACCCTCGGATCCTGTTATCATCGACCGGTTTTTCTTAAAGTTCTTCCTAAAATGCAACCAGAACTGTTTGAAGAATGCAGGGAATCCTCGGGACATGAGAAGGTTTcagGTGGTAATATCAACACAAGTGATGGTCGACGGTCCTCTCCTAGCGATATCCGACAACATGTTTGTCCACAACAACAGCAAGCACGGCCGAAGGGCGAAGCGGCTAGACCCAAGCGAAGGTACAGACGCCGCGACAGACCCTACTTGTTTATATCCGCCATTGCCAGTAGCTACGCCGTGCATCAAGGCGATATCACCGAGCGAAGGTTGGACGTCAGGAGGATCGACAGTCATCATAGTTGGGGATAACTTCTTTGACGGACTGCAAGTCGTTTTTGGGACCATGTTGGTGTGGAGTGAGTTAATAACATCACACGCGATAAGAGTGCAGACGCCGCCGCGACACATACCCGGCGTTGTGGAAGTCACGCTCTCGTATAAGAGCAAGCAGTTCTGCAAGGGAGCGCCCGGGAGATTTGTTTACGTTTCAGCGTTGAACGAGCCGACGATAGATTACGGTTTTCAGAGGCTACAGAAACTTATACCGAGACATCCTGGTGACCCGGAAAAATTACCAAAGGAAATAATACTAAAACGAGCAGCGGACTTAGCCGAAGCCTTATACTCGATGCCTCGGAACAACCAACTCGGTCTTGGCGCGCCTCGCTCGCCGCCTGCAAGCATGCCCTTCAACTCGTATACCGGGCAACTGGCTGTTAGTGTGCAAGACACTGCGGCCTCACAGTGGACTGAAGAGGAGTACGCGCGTAGCGGCGGCGGTGGCTCGGTGTCGCCGCGGTACTGCTCGGCCGCGTCCacgccgcacgccgcgcccgccgcctaCCCGCACCCACAACACTACCCTGCCCCGCCGACGTCACTGTTTAATACTACGTCACTGTCTCTAGGCCCGTACCATCCAGCGAACATGAATGGACACTTATCATCTGACCGTCACTATAACGCGTATTATACGAAAGATAGCGGACATTACAGTGAAAGAAATGGGAATTCTAAAAGCGTGGAAGACTGTCCGGTAAACATTCATACAAAATGTACGGACGGCGATATGAAAGGGGCTCAGAGTAAAGAGACTAAGCTGAGAAGTGCCTTTGCCGTTGTAAGGCAGAGTCCGCCGCGGGTTGCCAATGAACATCACCAGAACTGGCACCACCTCGCCGTTCAGTGttag
- Protein Sequence
- MFGLHHQEAAGGLHAQPRGPVTSLKEEPLTRAWMTPTSLVDNTNSVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPVEIERTAFIGFIEKDQEVEGQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQPIVYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGTDAATDPTCLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGGGSVSPRYCSAASTPHAAPAAYPHPQHYPAPPTSLFNTTSLSLGPYHPANMNGHLSSDRHYNAYYTKDSGHYSERNGNSKSVEDCPVNIHTKCTDGDMKGAQSKETKLRSAFAVVRQSPPRVANEHHQNWHHLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00843290;
- 90% Identity
- iTF_00843290;
- 80% Identity
- -