Tni006693.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Trichoplusia ni
Gene Symbol
arid5b
Assembly
GCA_003590095.1
Location
NW:16753-25099[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-11 2.3e-08 34.1 0.0 3 89 223 296 221 296 0.86

Sequence Information

Coding Sequence
GACGAAGTCCTAGCCATCAACGACAAGGTGGTCCTCCGCGCGGACGACCTGCTGAGCTGGATCTGCGCGGGCACGGAGTGGCGCTGGGGGCTGCGCGCGGTGTGGCGCGGCGCCTGCGCCCCCCCCGCGGACCCCGCCCGGACCGCGCCGCTGCACCACACCAAGCTTGACTTCAGCGATGTGGCCAGCGAGAAGAATACCATCGAGGTGGACGCGGACGCTCCCGGCGTGGTAGTGTTCTCGTACCCGCGCTACTGCCGGTACCGCGCGCTACTGGCGCGGCTGGACGGGCTGCAGGCCGACTGGCTGCGGGACTCGCTGGTGGCCGCGCTCGGGGGCTACGCCGCGCCCACCAACAACACCAGGATACTGTATTGTAAGGACACGTTCGAGTACCCTGAGCTGGAAGGTCACGAGTTCGTGTGCAACCACCTGGCGCCGCGGCTGAAGGGGCGGCCGCGGGGGCGGCGCCGGCGCGCGCACGAGCCCGAGCACGAGCCCGAGCACGAGCACGAGCACGAGCTCGAGCACTCCGGGGACAACAGCGACGATGCCGGGGAACAGGCGCAGCCGTCGCGCCGCCGGCTGTCGCTCCGCAACGGCGCGGCAGCGGCCAGCGAGGACGAGGAGGAGGAGGGGCGCCGCGCCGAGGACTCCGCCGAGGACCGCGCCTTCCTGCACCAGCTCAAGGCCTTCTACAAGAGCCGCGGCGAGAGCCTCAAGACTGGACACACTCTTAAACACTACTCGCTCCGCGCGCTGTACAGCTGGGTGGTGTCGCGCGGCGGCTACGAGAGCGCGTCGCGGCGCCAGCTGTGGCGCGCGCTCGCCCCCGCGCAGCCCGCGCGCGCGCGCCGACACTACGAGAGATTCCTCCTACCCTTCGAGAACCACGAGCGCAGAAACGGCTTGTCATACAAAATGAACGGCAAGACGGACTGCGAGCCGCACACCATAGCCACCATAGACGTGACCGACTCCCCCCTCAGAGACGACGACGTCAAGATACTGAGAACGCCGTCACCTAAACCAGAAAACCTGGAAAACTTAGACAAAACGGAAATCAAATACGGGAAATTCGAAAAGTTGGGTAAAATAGAGAAAAATGTCGACTCAGAAACCGGTGAGATTACGTCCAAAGACGAGTTGGTGGTGAAGAACGCTGAGGAGCTGAACCGGGAGTTCCTGGAGTCGCTGCAGGAGGAGAGGGTCTCCAAGATCTCGGTGAAGCCGGTGGACCAGCTGGTGGAGCCCGCCATGGTCAAGCTGTATGAGAAGGAGGAGAAGGATGTACAGTATCTGGATACGCAGAAGATTCATATAGCTGAATCTCCGTCACCTCGCGCTCCGCCAAACGGACACGCGCCTACCGACCttAAGAGCTCCCGTCCGGCGGGTCGCAGCTCGCTCCGCGCGGTGCGGGTCAAGCCGCAGCGGAGCCAGCCGCCCTCCAACACGCCCCCGGGCAGCGTGTCGACCACGTCCCCTCCGCTCACGAACTTCGGCATCCAccacccgccgccgccgcagccgcaGGACGACGACATCGTAGAGGTCCCGTACAAACCAAAAACCCCTGAAATAATCGATCTCGACGAGTACCCGGAGAGCCCTCAGGCAGTCAAGAAGAAGAAGCTGGACATCCTAAAGGAGCGAGGGCTGGAGGTGACGGCCCTGCCCCCCTGGCAGCCGCACCCGCAGGTCCTCGCCCCCCCTCTCATGCTGAACCCCGCCGTCCAGCATCAGATCATGACGCAGGCGCAGCTGTTCCAGATGTACAACATCGTGCCCCCCAACTACAGCAACGGGATCCAACCCCCCAAGGTCATACAGGCCTCCTCGATCTTCGGCAACATGGGCCCAGAGAAGACCGTCTACGGGAACCCCAAAGACCCCTTCATGCCCCCTCCGCACGTGCTACACGGGGCCCCTGTGAAGCCCCTCCGCACTGCGCCGGCCGCCCAGCCCACCCCTCAGGACATCCTCGACCTCACCTGCAAGTCCACCAGCCCGCCGCCGCAGAAGCCCGCCGTCGAGATAGTCAGGGTCCCGACCTCGCCCTCACCGAAGCTAACCCCTCAAAACCTATCCAAAAACTACACCTTAGTCGATGGCAAAGCGGTCGTAGGGTCAAATCTAGAAATAACGTTAGTCAATAAAGCTCAGAGCCCAAATAAGAACCGGCCGCCGCAGAAGCGCTCCAGCAACGGCAAGTTCATGTCCACGAAGACCCCCACCCCCCCCAAGGAGACCTACCCCAAGTACACGAGTCCGTCGCACAGCAGTCTGCAGAAGAAACCGCCTATAACCATACCCAGCTACCAAATACGAGAAGACGCCAACTCGATACAGTCGAACCTTCAGAACGCGATGAAGAATCCTAATCTAGCTCAAATAATGGACTTGCAAAAGTCGAGCGCGGTCCCCATGGCGTCGTTCGACCCCTACGTGGCGCTGTACAGCAGCCTGGCGGGGAGCCTGGACCCTCGCCAGCTGGCCCTGTACCGGGACCTCATGGCCAACCAGTTCCGCGGCTACCCCGGACTCATGAACCTGGGGGTCGCCAACACGCCCACAACGAAGAATTAA
Protein Sequence
DEVLAINDKVVLRADDLLSWICAGTEWRWGLRAVWRGACAPPADPARTAPLHHTKLDFSDVASEKNTIEVDADAPGVVVFSYPRYCRYRALLARLDGLQADWLRDSLVAALGGYAAPTNNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRAHEPEHEPEHEHEHELEHSGDNSDDAGEQAQPSRRRLSLRNGAAAASEDEEEEGRRAEDSAEDRAFLHQLKAFYKSRGESLKTGHTLKHYSLRALYSWVVSRGGYESASRRQLWRALAPAQPARARRHYERFLLPFENHERRNGLSYKMNGKTDCEPHTIATIDVTDSPLRDDDVKILRTPSPKPENLENLDKTEIKYGKFEKLGKIEKNVDSETGEITSKDELVVKNAEELNREFLESLQEERVSKISVKPVDQLVEPAMVKLYEKEEKDVQYLDTQKIHIAESPSPRAPPNGHAPTDLKSSRPAGRSSLRAVRVKPQRSQPPSNTPPGSVSTTSPPLTNFGIHHPPPPQPQDDDIVEVPYKPKTPEIIDLDEYPESPQAVKKKKLDILKERGLEVTALPPWQPHPQVLAPPLMLNPAVQHQIMTQAQLFQMYNIVPPNYSNGIQPPKVIQASSIFGNMGPEKTVYGNPKDPFMPPPHVLHGAPVKPLRTAPAAQPTPQDILDLTCKSTSPPPQKPAVEIVRVPTSPSPKLTPQNLSKNYTLVDGKAVVGSNLEITLVNKAQSPNKNRPPQKRSSNGKFMSTKTPTPPKETYPKYTSPSHSSLQKKPPITIPSYQIREDANSIQSNLQNAMKNPNLAQIMDLQKSSAVPMASFDPYVALYSSLAGSLDPRQLALYRDLMANQFRGYPGLMNLGVANTPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-