Tni014291.1
Basic Information
- Insect
- Trichoplusia ni
- Gene Symbol
- Kdm5d
- Assembly
- GCA_003590095.1
- Location
- NW:12596-23540[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4e-26 6.5e-23 80.7 0.0 2 89 101 184 100 184 0.94
Sequence Information
- Coding Sequence
- ATGGGAAAATGTGACGAAGGTAACGTCGAAGTTAGCATGGGGGACTCGGCGTCCCCTATGAAACCGGATAATTTCTCATTTACACCTCCTCCGGAGGCCCCAGTGTTTGAACCAACGCCAGAAGAGTTCCTGGACCCCCTGGCGTACATCAGTAAAATAAGACCAATCGCTGAGAAATCGGGCATTTGCAAGATTAAACCTCCAGCGcaCTGGCAACCCCCATTCGCTGTTGATGTCGACCGATTACGGTTCACACCTCGGATACAGAGACTCAATGAGTTAGAGGCAATAACGCGAGTAAAACTCAACTTCCTGGACCAGATAATAAAGTTCTGGGAACTACAGGGCTCAGTGCTAAAGATACCCACAGTGGAGAGGAAGCCACTCGATCTTTATGCACTGCACAAGATTGTCAAAGAAGCAGGCGGCTTCGAAGTATGCTCAGCGGAGCGCAAATGGTCGAAGGTGGCGCGGCGGATGGGCTTCCCCCAGGGCAAGGGGATCGGCTCCATCCTCAAGAACCACTACGAGAAGATACTCTACAGATACGACGTCTTCAAGAGTAATGGAACTGACAATAAAGAGACTGTAAGTTTATCTTTACTACAGATTTCTGACgactttgttttttctttctga
- Protein Sequence
- MGKCDEGNVEVSMGDSASPMKPDNFSFTPPPEAPVFEPTPEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSVLKIPTVERKPLDLYALHKIVKEAGGFEVCSAERKWSKVARRMGFPQGKGIGSILKNHYEKILYRYDVFKSNGTDNKETVSLSLLQISDDFVFSF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00706725; iTF_01435841;
- 90% Identity
- -
- 80% Identity
- -