Tsar010266.1
Basic Information
- Insect
- Trichomalopsis sarcophagae
- Gene Symbol
- grn
- Assembly
- GCA_002249905.1
- Location
- NNAY01000359.1:56-23766[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.5e-20 2.3e-16 58.9 4.7 1 35 79 112 79 113 0.98 2 2 2.7e-18 8.3e-15 53.9 5.6 1 35 136 169 136 170 0.97
Sequence Information
- Coding Sequence
- TCGCACGTCGGTGCGCAGAACACGCCTAACTCGCCCGGCTCCCAGCAGCAccatcagcaacagcagcagcaaaagcCCAGGAACAAGTCCAGGACGTCCGCCGTCACTCTGGAAGGATTTGGAATGCGACCCATTCGAAATCGTTCCGCACATAGTACTCGTGTAAAAAGGACAAACATTTCTAACCCAATCGGCTCTTCGGGGCTCTCTTTACCACCCACAGAAGGCCGCGAGTGCGTCAACTGCGGCGCGACGTCGACACCACTCTGGCGACGAGACGGCACAGGCCACTACCTCTGCAACGCCTGCGGACTCTACTACAAGATGAACGGCCAGAACCGGCCGCTGATCAAACCCAAACGACGCCTGTCACTGCAGAGCGCCGCGAGACGAGCGGGCACGAGCTGCGCGAACTGCAAGACGGCCACGACGACGCTCTGGCGGAGGAACCAGGCCGGAGAGCCCGTCTGCAACGCCTGCGGCCTCTACTACAAACTTCACAACGTCAACCGGCCGCTGACTATGAAGAAGGAGGGCATCCAGACGCGAAACAGGAAGCTCTCGTCgaagagcaaaaagaagaaggccGGCGGCTGCCTCGGTCTCGGCGGCGTCATGGGTGACATGATCAAGGCCACCGGGCACCTGGACCTCGACAACAAGCCCTTCCACTCCGGATTCGGATCGCCCATGAGCGAGTATCGTAAGTGCACGCATCGATCAGCCTTTTGTCCCCCGCCGCTCCCGTATCCAGTGTCAAAGAGACCTCCGCTCCCTGCACCTACGATTTTTACCGCCCTCATCTCACCGAGCGCTCGCTCGATCTCGCGACTTGTTCCAGGTACCTCGCAGCACCACCACACGATGCACCCGGCGATGCAGCACTACATGTACCACACGGGCGTCGGCGGGCTCCAACTGGCCGCCACGACGAACGCAATGCGACGCTGTTACGAGCCAGAAATGAGCCAAGAGCGAGCAGTATCTAACGCGGACGAATCTTTTCTCCTTGCTGTTGCAGACGGGCTGGCGATCCGAGTACACATGAACGGCCAGCGCCGCGCACTAAACCGATGA
- Protein Sequence
- SHVGAQNTPNSPGSQQHHQQQQQQKPRNKSRTSAVTLEGFGMRPIRNRSAHSTRVKRTNISNPIGSSGLSLPPTEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSLQSAARRAGTSCANCKTATTTLWRRNQAGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKAGGCLGLGGVMGDMIKATGHLDLDNKPFHSGFGSPMSEYRKCTHRSAFCPPPLPYPVSKRPPLPAPTIFTALISPSARSISRLVPGTSQHHHTMHPAMQHYMYHTGVGGLQLAATTNAMRRCYEPEMSQERAVSNADESFLLAVADGLAIRVHMNGQRRALNR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -