Tsar000517.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Trichomalopsis sarcophagae
Gene Symbol
ZNF236
Assembly
GCA_002249905.1
Location
NNAY01000764.1:7376-22186[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 5.4e-06 0.00058 20.0 0.9 1 23 184 206 184 206 0.98
2 26 0.00011 0.012 15.8 1.6 1 23 212 234 212 234 0.97
3 26 6.6e-06 0.00071 19.7 0.2 2 23 240 261 240 261 0.97
4 26 0.00018 0.019 15.2 0.7 1 23 267 289 267 289 0.97
5 26 0.00059 0.063 13.6 2.1 2 23 300 321 299 321 0.97
6 26 2e-06 0.00021 21.3 0.7 1 23 342 364 342 364 0.99
7 26 0.00012 0.013 15.7 0.9 1 20 370 389 370 392 0.96
8 26 2.2e-05 0.0024 18.0 0.4 1 23 398 421 398 421 0.96
9 26 0.0001 0.011 16.0 2.0 1 23 430 453 430 453 0.98
10 26 1.1e-06 0.00012 22.1 2.4 1 23 546 568 546 568 0.99
11 26 3.5e-05 0.0038 17.4 2.9 1 23 574 596 574 596 0.97
12 26 0.00052 0.056 13.7 0.5 1 23 602 624 602 624 0.95
13 26 0.0078 0.84 10.0 2.6 1 23 628 651 628 651 0.97
14 26 6.5e-05 0.0069 16.6 3.8 1 23 712 734 712 734 0.98
15 26 2.8e-08 3e-06 27.2 0.3 1 23 740 762 740 762 0.98
16 26 0.00013 0.014 15.7 3.4 1 23 768 790 768 790 0.98
17 26 0.00016 0.017 15.3 5.7 1 23 796 818 796 818 0.97
18 26 0.0019 0.21 11.9 1.5 1 23 1136 1158 1136 1158 0.94
19 26 0.00092 0.099 12.9 2.5 1 23 1164 1186 1164 1186 0.97
20 26 2.9e-08 3.2e-06 27.1 1.2 2 23 1220 1241 1219 1241 0.98
21 26 4.6e-05 0.0049 17.0 2.7 1 23 1247 1269 1247 1269 0.99
22 26 4.2e-06 0.00045 20.3 1.1 3 23 1277 1297 1275 1297 0.98
23 26 0.00055 0.059 13.6 2.6 1 23 1303 1325 1303 1325 0.98
24 26 5.9e-07 6.3e-05 23.0 0.8 1 23 1518 1540 1518 1540 0.98
25 26 2e-07 2.2e-05 24.4 3.4 1 23 1546 1568 1546 1568 0.99
26 26 2.1e-07 2.3e-05 24.4 1.8 1 23 1574 1597 1574 1597 0.97

Sequence Information

Coding Sequence
ATGGAGGACATGGGGTTTATGAATATGCTCACTGATGATGGCACTACATTAGTGTCTGTGCACCAGAGAGACGATGGAAGTTTGGAACTTATATCAACACCAGTGACAATCATACAGGATCCGTGTAATGGACCTGTGCAGGAGCTAAATACTACTAATGcagagtttatttttaatcaaATTAAGATCAACAATGCTTCAATCAATCCTCCAGAGATTATTCAACAACCTAACATAACTTCCATCGATgtgataaatttgaattcacAAATTGTACAAGTGGCCAGTGATCCGCAGTGTTGTATTGCAAAGacatcaaataatttattacctgACAATGTACAAGAAATATCAAATGTAGAAAATAGCACAGCAGTAAGTACTGTAGATGTggaaagagaagaggaagaagtaCAAGATGAATCtccagaaatattacaagAATCCACGAGTCCTGAAAAAGACTCTTCATCTTCTAAACAGCATAACCATAAGAATCTTGGCAGGCCAAAAAAGCACAGCAAAAATGCTAATGGAGTGacAGTATATTTCAAGTGCGACATCTGTGGTTTGGGATTCCGGAAACAGTACTTGATGCAAAAACATATGCAAGAACATGCGCAAGAGAAACCACATCACTGTCCAAAATGTCCTGCATCATTTAATGTTCCAACCAATTTCACTTTGCACATGGCGACTCACAACATAGGTGAGCCAAAATGCCCACAGTGTGGACGAAGATTTGCACGCATGGCCAGTCTCAAAGCTCATATGGTGGTACATGAGGTGGATGAGAACCACTATTGCACCGAGTGTGAAAGTGTTTTTGAAACAAAGGCCCAGTTGGAGGCCCACTTGAAGCTGCACAGCGAGAAATGGTCAACGGACGACTACAAGCGCTGCAAGCTCTGCCGCAAGCAGTTCACCCAACCCGTCCTCTATCGTCAGCATTTACGCGATCACTACAAAATGCAGACCAAGTGCCCCAAGCAGACGAAGCGCGGGGTCACGATCGGCACCATTTACAAGTGCAGGCTGTGCCTCAAGTCTTTCGAAAAGCCCAGTCAACTAGCCCGGCACATCAGGGTGCACACCGGCGAGAAACCCTACAAGTGCAATCTGTGCAGCCGAAGCTTTTCGCAAAAAGGCTCCGTGAGGATTCACATGTGGCAGCACAACGGCATCAGGCCTTACAGCTGTTCCCTTTGCAAGGCTAAATTCAGTCAAAAAGGCAACTTGAACGCACACGTGCTTCGAGTGCACAAGATCCAGGGAGGCGCGCCGATCTACCGCTGCACGCGCTGCCCCTGTGTCTTCAAGAAGCTCGGCAGTCTGAACGGCCACATGAGACGAGCGCACGCCGGCGCTGAGGATGGGACCACCGAGGAAACCGCCGAGGAGGTCCAAGAATCTCAGGAGACGACCGTTGACCCCACCGAAAACGTGGTAGATACACCGTCGGAAGCAGAACCGAGTGCGGAGACGACGGAACTGCCCAAGGACGTTGAGGATGGTTTCATTCTCACGGACGACAAGGAGCAGACGGCCGTCGTTACGCTTTTGGATAAGGTTGCCAATGATGCCAAGGGGAAGTACGTTAAGTTGAAGCAGCGGTTTGTAAATAACTGTATACAGTACGAATGCGATTTCTGTGATAAAACGTGCAAGAAGCCATCGGACCTCATGAGGCATTTGAGGGTACACACGCGGGAAAGGCCTTTCAAGTGCAAGACGTGCGATCGATCGTTTACCCTCAAGTCCACCTTAATGACGCACGAGAAGCTTCACGAGAATGCTGGAAAGTACAAGTGCCAAAACTGCGACATGGCTTTCAATACGGAAAATGCTCTCAGAGCTCACGACAAAACTCACAACAAAGTTCACAAATGCATGATCTGCGTAAAAACCTTCTCGAGCTTCGAACGTTTAAGGGAGCACTCCATGACTTTGCACATGGGCCGAAAGGTCCAGTCGAGCCGTCAGAAAACGCAACTGCCATCGGAAGTGCAGAACCTAGCGCCCAAAGTCGTGTTGAAGGAGCCGCTCGTCTTAACCGAGCTCAGCAGCGGTTTGCTTCACGCCCAGCCCAAGTTCGCGAGGACCAGCAAGCTGGCCCATATCAAGGGAAGGCCCCACAAGTGCCAGACCTGTCCAGCCGCTTTTACTAAACTCAGTCATCTTAAACAGCATGTTCGAATGCATACCGGGGAAAGGCCGTTCATCTGCCCTATTTGCGACAGGAGTTTCACGACTAACGGCGCCCTTAAAGCACACCGCCGTACGCACGACATGTTAAAACCTTACCAATGTACGATATGTAgcatgaatttttctaccTTGAGTAGTATGAAGAGGCATCATGTTACGCACAGCAATAAAAGACCATTTATGTGTCCGTACTGCAATAAAACCTTCAAAACGACGGTGAACTGTAAGAAGCACATGAAACTGCATAAACAAGAAATCGCGCAACAGCAAATAGAGAGCCAGGAgaaacagcaacagcagtcTTCAAATTCGGATGCAATAGAGACAATTCCTGCGACAGAACCAACCACAACCATTAATCAGCAAATCACTTTTAAGCCTATAGCAACTGACATAACGCAGAACTTGAATGAACAACTTCAAATAATGGACAACAATAATGCTCCTGAATCGAATTCTACGTTATCCCAAAATATACACGTATCGTGTCAGCAAGAAAAGAATATATCCGTAGTAGAAAACTCTAACATAGGTTCGACCCAAACATTGCATGCCGACGAGACCGGCACTATTACCCTATCTAACTATACGGGTGACCCGACACTTACACCtGAGAGTATTAGAGTAATAGAAGAGACTCTGAACCAACAATTATCTAATATCGGACTAAACATGGCACTTAACAGCAGCGTTAGGCAGATCGAGGAACATAATAATACTTCTACAGTTAACAGGGATCAACCAACGTTGAGCATTATTTACGACAAAACTGTGGCATCACCTATGAATACGAATACCATGAGTGCAAATGTTTTTTCTCCACAATTTGAAGGTTTTGATATCAATCAAATAACTCTACAgGGTGACAATGAAATTGATCTGGGAATAATACAAAACAATTCGTCACAGACGACGAATATTTTACCAAATAtacatcaaaatcaaaattacagTTTGCAATTTCTCAATAATGAACTTTACGTGAATACAATTCTTAAACAAAGCCAAGTGAATCAGTTAAAAGACAATAATCATTTGAATGAATCGATGACAGTCGTAACCAGTGATCAAGTTTGTAGTGACGCTAATAAAGCTTCggacaaagaaaataatttacaatgtCATTTGTGCAACATGCAAGAATTAAGTATTGACGACTTAAAGGAACATCTTAAAACTCACCAAGAGCCTAAAGAATTTGAATGCATCCAATGTCTTACGAAATTTCGTACTACTGCAGGCCTCAAGAGGCATATGAAGACTCACGAGACACAGGAGACTCATAAATGTTACGAATGCAATCAAGAATTTTCTACGACGTTGCAGCTTAGAGAACATATAAAAGAGCATGTCAAACACGaattaaaactgaaaaatgtaGTAGATGCTGATTGTATGcctaataatattaaaaaaggaaaaaaagacAATACTGCCAATAAGGATAACAAATGTCAATACTGCCCAAAGACCTTTCGAAAACCCAGTGATCTCATAAGGCATATTAGAACGCATACCGGTGAGCGACCATATCAGTGCCAATATTGCGATAAGAGTTTTGCTGTTAAGTGCACATTGGATTCTCATTTGAAAGTGCATAAAGGCGATAAATTGTTCGGTTGCAACGTGTGCAATACCATGTTTACAACAAAGAGCAGTCTCAAAGTTCATTTACGACTCCATACAGgagCTAAACCATTTAAGTGTTCGATTTGTGACATGCAGTTTCGCACCTCCGGCCACCGTAAAGTTCACGAGATGTCCCACATGCGGGAAAGTAAACCCATAGACCAGCCAACTTTGATCGACGGAAGTTTAGACTCGGTAAATACCGTAGAATCTGCAGAATCACCTGGTGACACCCGAATTGTGCAAATAGTACACACAGTGCCTGTTCATCAACAATTAGAACAGCAAAACGCGaatcttttcaatttcaattctAACAACATTACGATAAATCCACAACAAGTAAGCTTCAGCATGGATGATGGATCGAGCCTGTTGAGTTTGAACGAAAACAATCAGTTAGTGGCGAATCTAGACTTTTTACTGGCTAACGGCTTGGTCAATATATCATCTGAAGGTCTGCAGTTGACTGACGATTATGTCGCGCAGAAGATGCAAGAAGAGCCAAATGATGCTCATGCACAAGTGATCTTTGCGACTGAATTGCCGGTCACGGATGTACAAATAGCACAAGGGATGCATCCAGATCCGAGTGGCATCGATATGGAAAACTGCATGGTTCTGCCTTTAGAAAACTTCGATTCTTTTTTGGAAGGGAAAAACGATGAGGATGAACTAAAAGAGGATGATAGCCCGAGtacCACAGGACCACGCTACGACTGTGAAATTTGCGGTAAATCGTTCTCCAAACCTTGTCAGGTCGAGCGGCACATCCGCGTACACACGGGTGAACGTCCATTTAAGTGTGAAACTTGCAACAAATCGTTCTCCCAGAAATCATCATTACAATTGCATCAAAAAAGTCACACCGGCGAACGGCCTTACGCCTGTCCACATTGCGATCAATCGTTTACTCAAAACGGTAACCTTCAGACCCATGTGCGTCGTAAGCACAAGCTTGAGTCTGGAAAACGCCAACAGTTTGTcaatgttaattattttgatccGAATAAAATTCTAACGTCGGAACAGCAGCAATTTATGTTTGATAAATCGATCGGGTTTGAGGATATGTCGATCGTTGAGTTGCTTAATTGA
Protein Sequence
MEDMGFMNMLTDDGTTLVSVHQRDDGSLELISTPVTIIQDPCNGPVQELNTTNAEFIFNQIKINNASINPPEIIQQPNITSIDVINLNSQIVQVASDPQCCIAKTSNNLLPDNVQEISNVENSTAVSTVDVEREEEEVQDESPEILQESTSPEKDSSSSKQHNHKNLGRPKKHSKNANGVTVYFKCDICGLGFRKQYLMQKHMQEHAQEKPHHCPKCPASFNVPTNFTLHMATHNIGEPKCPQCGRRFARMASLKAHMVVHEVDENHYCTECESVFETKAQLEAHLKLHSEKWSTDDYKRCKLCRKQFTQPVLYRQHLRDHYKMQTKCPKQTKRGVTIGTIYKCRLCLKSFEKPSQLARHIRVHTGEKPYKCNLCSRSFSQKGSVRIHMWQHNGIRPYSCSLCKAKFSQKGNLNAHVLRVHKIQGGAPIYRCTRCPCVFKKLGSLNGHMRRAHAGAEDGTTEETAEEVQESQETTVDPTENVVDTPSEAEPSAETTELPKDVEDGFILTDDKEQTAVVTLLDKVANDAKGKYVKLKQRFVNNCIQYECDFCDKTCKKPSDLMRHLRVHTRERPFKCKTCDRSFTLKSTLMTHEKLHENAGKYKCQNCDMAFNTENALRAHDKTHNKVHKCMICVKTFSSFERLREHSMTLHMGRKVQSSRQKTQLPSEVQNLAPKVVLKEPLVLTELSSGLLHAQPKFARTSKLAHIKGRPHKCQTCPAAFTKLSHLKQHVRMHTGERPFICPICDRSFTTNGALKAHRRTHDMLKPYQCTICSMNFSTLSSMKRHHVTHSNKRPFMCPYCNKTFKTTVNCKKHMKLHKQEIAQQQIESQEKQQQQSSNSDAIETIPATEPTTTINQQITFKPIATDITQNLNEQLQIMDNNNAPESNSTLSQNIHVSCQQEKNISVVENSNIGSTQTLHADETGTITLSNYTGDPTLTPESIRVIEETLNQQLSNIGLNMALNSSVRQIEEHNNTSTVNRDQPTLSIIYDKTVASPMNTNTMSANVFSPQFEGFDINQITLQGDNEIDLGIIQNNSSQTTNILPNIHQNQNYSLQFLNNELYVNTILKQSQVNQLKDNNHLNESMTVVTSDQVCSDANKASDKENNLQCHLCNMQELSIDDLKEHLKTHQEPKEFECIQCLTKFRTTAGLKRHMKTHETQETHKCYECNQEFSTTLQLREHIKEHVKHELKLKNVVDADCMPNNIKKGKKDNTANKDNKCQYCPKTFRKPSDLIRHIRTHTGERPYQCQYCDKSFAVKCTLDSHLKVHKGDKLFGCNVCNTMFTTKSSLKVHLRLHTGAKPFKCSICDMQFRTSGHRKVHEMSHMRESKPIDQPTLIDGSLDSVNTVESAESPGDTRIVQIVHTVPVHQQLEQQNANLFNFNSNNITINPQQVSFSMDDGSSLLSLNENNQLVANLDFLLANGLVNISSEGLQLTDDYVAQKMQEEPNDAHAQVIFATELPVTDVQIAQGMHPDPSGIDMENCMVLPLENFDSFLEGKNDEDELKEDDSPSTTGPRYDCEICGKSFSKPCQVERHIRVHTGERPFKCETCNKSFSQKSSLQLHQKSHTGERPYACPHCDQSFTQNGNLQTHVRRKHKLESGKRQQFVNVNYFDPNKILTSEQQQFMFDKSIGFEDMSIVELLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00286637;
90% Identity
iTF_01036451;
80% Identity
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