Basic Information

Gene Symbol
Arid2
Assembly
GCA_002249905.1
Location
NNAY01000053.1:74567-106623[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.9e-25 1.8e-21 76.1 0.0 2 89 52 137 51 137 0.95
2 2 0.55 1.4e+03 -0.5 0.1 34 71 588 626 578 640 0.71

Sequence Information

Coding Sequence
ATGTCGGCCGAGTCCGGCGCTGTCGCGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNCAGCAGCCCCCTGCACCCGAGAAAGAACATGGCCCTGCAGCAGAGCCCCGCTAATCAGCAGCAGGCCGCCAAGGACCCCGTCAGCTACGAGCGGCTGCGCGAGGCCTTTATTAGGGACCTGCATCACTTCCACGACACAAGAGGgACACCGTTCAAAAAATGTCCAAGGATAGACGGAAAGGAGGTGGATCTCTACAAGCTCTACACAGTTGTTACAGCTCGAGGTGGATGGATACAGGTGAACAACAAGAATGAGTGGGTGTGGCTCTGCGAGGAGTTCCATCTGCCCAGCGGCTGCGTCAATAGCGGCGTCGGCCTCAAACAAATTTATCTTCGATACCTGGACAGATACGAGAAGGTACACTTCCTGGGCGAAGACGGTCACCAAgccgacgacgatgacgaggacTCGAGGCATAGAAAGTGGAATGCCAGGTCCCTTCATTCCGTACCGCTGACCTACAATCATCACCAGCACAACGTTGCAGAATCGCTTCGAGAGTACAACGGACTGTCGTCGGATCTCTACAAGCCGTCCAACTACGACAAGCTCGCGCTCTCGTTGCTTTCGCCTCTGCCAAACGAGCAGGACTTCGCCATCAACGTCTGCACCTTCCTATCGAACGAGGGAAAGCACGCATTGAGGCTAGACAAGTATCCGCGACTCATCAACCACCTGCTCGCTCACGCGGGTATTTTCGACTCACCCGGTACGAGGCAGCTCTTCATTGAGGTCTACTCCCGGGTACGCAACTACTCCATCAACTCGTTCTGGCCGGATGTGCTCGACGGCCAGGATGTCCTGGATCTCACCGACGAGAGGATCTTTATCAAGAAGCCCATCACCGCCAACAGCCAGAGGTTTATCAGGAGGAGGCAGGAGAAGGAGAGACAGAGGAATCAACAGAGTGACGTTGTCACGTTGGACGATGCATCCTGTCCCATGGATATCGATAATGGCTCGCTCGAGTGCGACAGGCTAGAGAACGGTATCGAGATCCTGGAGGAACGACTCAACCCGCACCTCATCGACGAGAACTCGACCTCGTCCAACACCTCTTCCACGTTCAAGGATCAGAATCAAAATTCGATAAAGTTCGAGGACGACGATAAGGACCTGTTCTGTGTGGGTAGGACCCTTGGCACCCAAGACCCCTACGGCCAGCGCGTCCTCCAGATCGCCTCGATACTACGCAACCTCAGCTTCACGCCCGAGAACGCTGCGGTGCTGGGCAGGTCGCGCTCTTTCCTCAGATTCGTTCTGCTCTGCGTGCGTGCTAGGTGGTGTAATCTTCACCAGCTCGGATTCGACATCCTTGGCAACATTGCCAATGAGATAATCCTCAAGGATGCCGGTGAGAGGCTGACCAGCGTTATACTATCGAGCGTCGCGAAAGGCATCGACTCGCCCGACAGATTCATCGTAATCAGTTGCCTGGAGATACTCAACAAAGTCAGCCAGCAGGATCTCAACGAAGAGACGCTAACCTTCGGTTTAGATGACAGCGTCTACGAACTCATTTGCAGATTCCTAGCTCTGAGTGACATAGCATTGCTTGTCTACACCCTCGAGTGTCTCTACGCGCTCACGTCTCTGGGAGAGCGCCCCTGTACGAGTGTGGCGCGAGTGCGCGGCGCCATCGATACCCTTGTGGCTCTCGTGACCGTCGAAGCCCAGAGCTACGGTCCAAAGGCCTGCATACTTATGCGCGTCGTTGAAACCGTCTCCTCAGTACCTgccagccagcagcagcagcagcagcagcagagtccACAAGTGGCTCAGCAATCGTCGCCGTCCCAACAGCAGCAATCGCAAACCATAAGCgcagccgcggcagcagctgctTCGAGTTCGGTGCACCATCACGTGAGCACTGCCCCATCGCAAGGCGCACCCATGGCCACGAGTGTTAGTGAACCCACTGGTCCCGATGGACAGGTTAGTAGTACTGGCAGTCCCAGTGGTAGTGGCCAAGTGACGGAAGTTGTGGCAGTAAGATTGGCGCCGCACCAGATGCAACAGGTCAAACAGCAACAAACAGTGCAGACTGTACAGGCAGCCCAGGTGGCTCAGGTGCAGGCACAGTCGCACACGCAACAAGCACAAGCACAGTCGGCCCAACCGATACAGGCGACGCCGACGAAAGCGATTGCCGCCGGTGGATCGTCCAGACCAAGTACTCCcaaagctgctgcagcaaAAGCAGCTGCAAATTCGTTGCAACAGCAACACACTCATCAGCAGATTATCCAGGAAAACGAGCAGTTCGCTCTTGGTTGGCTAAAGGCCACCTTTGAACTCTCTCCTGGCGTGAGAATAGAGCAAGAAGAGTTGTACAAAAAATACCTTGGTTGTTGCACAAAGATTGGTAGAAGAGGTGTGATTGCTCCCCTACATTTTCCTCGATGTGTCAGGTCCGTTTTTGGAGGAACGATCGGACCAAATCCTATCAAAGGCGAAAACACTGGCACATTGTACTACGAAGGTATTCGAGTACGTGCAAATCCCGGTCAAGTGACATATCCACTTAAAGGTGTGACCCGTCCCAACGTAACAGGGGCCCAAGCAGCTGAGAACGCGTCCGGCAACGTCGTTACTATCGTAGGCGGCACTAGCAACGTCAATTCAGCAAAGGTGCAGCAACAGCGTAACGATAGCACGCCGATACAAGTCACGCCGTCCTCCCCAATCCTTAAAGCTCAACTATCCGCTCCACCGAAACCTTCAGTGCATCCTGATAGTCCATTATCTATAGCCCCAAGCTCCGCCGCAACTGGCAATATTTTCCCAATCGAGCCCAGAAGTCAGGTCTCTGTTGCACATCCTCATCTCAGCCAGGCACTTTTGGCAAGTGGAGCTCAGCAACAGGCAGGCCAGCAGCAACAACCTCAGCAAGTGCAGGTGATCGTAAAGGATGACGGCCGGGGAGGCACCACTTCAAGTTCCATCATCAAAAGCCTACTGGCTACCAAGGTAACGGTCGCTGGCGAGTGCATGCAAGCCGTCGCCGTCGCGACTTCTTCCTCTTGTGTGTCCGCTGTGCCGGCAATAACAAACGCCACAGGCGTAGTATCCAGCATCAGTGCCAACCAGCTAATAACAAGCAACCAGGTTGCTCAACgtcaacaacagcaacagcagcagcgtcaaCAGCAAATGCAACAGACACCAGGTGCGATTATTGGAACGAAAACAATTATCAATGCCAAAGGCAAACCTACCATCGTTGCTGTCAAGAAAATACAGAGGCTCAATGGCGCCAAAGTCATCGTTGCCAACAATGGCGAAAAGccCGAAGCAATGGACACAGATAATGGTCTACACGCGACAACAAATCAGCAAACACAGTTGGCAATAGCAAGTATTGTTCCACCCACCAGCATAGACTCATCGAACCATGTAACCGGAGTTATGCGCGTATATCGAGGTCCGGCCACTCAACAAGTATCGTTGACCACTGCTAGTTCCACAACAGGAACTGGCAAACAATCGAACCAACAATTGCGAAACGTGTGCACACCGATAGTCGAAGACTCGGATTCAACTAACAATTCGTTGGCTTCGTCGAGCGGAATTGGTGGCAGTCGCGATTGTTCTGGTGTGGGAGCCGAGGAAGAAAACTCCCTCACCAGTTTCGAAGGTATTCTGCTGAATGGTGCGCCAAGTAACCTCGATATCGATGCGCAAGACGACGGTTCATCAAAGGACTCGTCAAGCATTGGCTCAAAGGAGAAACCCTCGCAAAGTATGATGCTGGCTGATCTGCTTGAGCGAAAGGTTGAGAAGGAACCGATCATGAATGGTGTTTTAGGGAAAAAGGATCTCGTCGAGAATCATATTAAGAAGgTACTAAAAGAATCTCCGGGAGATGTGAAGATCAAAGCTGAGGTGTCTGAAGACGCATTGATTGAGGCACCAGCTCGCTTAGGTATTAAACGAAGTGGAAGTACAGTAACTAACGAAGCTGATGAATCATGTGATGCCAAGAAACCCAAGTATTCGAATGGCACAACATCGCCCGATCCCGCCGTAGTCGACTCGACTACGATATCAAGCATCAAATCTGAAGAACAAGAtgatgaaaaagaagagaaggtTACAGTTTCATCAACCGCAGCAAATTTATATGCAGCGCTTGCTGCAGATATTATTGATGACGAAACGGATTTGGAAGAACCCTCAGTGAAAGAGGAAATAAAACCTGTAGtcaaagaagaaataaaagcgGAACCATCGACACCTGttGCAGTAAAACAAGTCGCTGTAAGTCAAGAACAACTACAGCCCGTTCAGCAGCAAGTTCAAGTCCAGACCCAAGTACAGCCAGTCCAGGTTCAAACAGTAGCTCAAGCACAACCGCAGCAGCACCACCCAACACATCAAACTATTGCAATCACGCAACAGCAGCTTCAGCAGCAACTACAACAGGGTCTGATAGTTGCTGCAGCACCGCGTCAAATTGTAGTACAACAGACCATCCAATCTAATAATCAAATCGTTACGATTCCGGCAATGAAAAGCCGGCCACAACACCAGATTCAACCTCAAGTTCTACAGGTGCAACAAGGTCCTGGTGGCCAAACACATTACGTGATCTCGGGTGGCGTACCGGGACAAAATTATGTGTTGGCGCAGCCGCAGACAGCGCTAGTCCAGGGTCAGGCGCAGACGGTGCTCGTAGCACAGCAGCAAGGCACAAATGCCAAgacgataattattttacaaccACAAGCAGCTGCGCAACCGCAAGCTCAAAAAATGGTTGCTGTTACACCACAAGGCCAACAAGTCGTTGTAACACAAGTACCAAGACCACTTATGCAAAGCCCAGCGATGGGCAACATACCACCACCTCTAGTACCTACGTCTGGAGCCATCAGTCAAGCTTCCATTGTAATGAACAGCGCCGTTGCACAACAGATACAGCAGCAACAAGATCAAATTGTATCACAGCAGCAAACGATAACACAACAAAAAATCACTCAAGTTCAAGCGCAAATACAACCCGCTGCAAACACGGTAACGGTAGTACAAACTCAGCAAGCAGCTGCAGTGGCCACAACTGCTGGAAATTCTGTGCCCTCTCGTGTGGTTACACCTACTCCAGCATCAACGCCACCACCTACCAGACCCACAACTCCTCGTCAAGCTGCAGCAACAAATCAGGCGCCAGTGACTGCACCGACAAAACCTCAGCCACAGCTTATAGCCCCTTCGCCTCGTACGTCGACTGAGACAAAGGAAGTCGTAATGGTAACCGCTGCAACTTCAACAGAACCAGAGAACACGGAAAGTACTGAGGGTAATAATACAAAGAAATCACTGACAAGTCAAGAAACATCGACATCTAGACCGCAGTCACCAGCAACTCCTATGAAAACTATTACAGTCACTTTAGAACGCAATGCATTTCTCTGTGAATGGAGAGGCTGTTTCAAgcaatttaaaaatccacgAAAAGTGTATCTGCACGTTGTTGAAGCACACTGTCCAACTGGAAACGAAGAAACTCTTTGTCAGTGGGCTAGTTGCGACGGTTTAAAAAGACGAAGATTTTCGTTGATGACTCACTTATTCGACAGACACTGTTGTGATGAGATAATGTTGATGAGAAGGAAACAGTTTGATCAGTCGGGTAAAACGGAATATCTGACTAGCAAGCCAGTTGCCTCGCCAACACATCACCCCGGCTATGCTCCAAACGCCGCGTTACATGCTATTAAAAGGCACGCTTTAGAATTTGTCAATCCTAAAGAATTAATGCAAAGGCCATCGAAGCCCGCTGCGGCCAACACTAGCTCCTCTTCCCCCAGACCCGGGCAAAATCCTCCGCCGGAACAGgaTGATAATGAAGGACCTGTAACAAAAAGTATTCGCTTGACGGCAGCTCTTATTCTCAGAAACCTAGTCATATATTCCGCGCATGGCAGAAGACATCTTCGAGCGTATGAACCGCACTTGGCAGGTGTAGCGTTAAGCAACGTCGAATCATCGCGGACGATCGCACAAGTCCTGTATGACATGAATGACCAGAGTAGCAGCGGTCACAGGTGA
Protein Sequence
MSAESGAVARXXXXXXXXXSSPLHPRKNMALQQSPANQQQAAKDPVSYERLREAFIRDLHHFHDTRGTPFKKCPRIDGKEVDLYKLYTVVTARGGWIQVNNKNEWVWLCEEFHLPSGCVNSGVGLKQIYLRYLDRYEKVHFLGEDGHQADDDDEDSRHRKWNARSLHSVPLTYNHHQHNVAESLREYNGLSSDLYKPSNYDKLALSLLSPLPNEQDFAINVCTFLSNEGKHALRLDKYPRLINHLLAHAGIFDSPGTRQLFIEVYSRVRNYSINSFWPDVLDGQDVLDLTDERIFIKKPITANSQRFIRRRQEKERQRNQQSDVVTLDDASCPMDIDNGSLECDRLENGIEILEERLNPHLIDENSTSSNTSSTFKDQNQNSIKFEDDDKDLFCVGRTLGTQDPYGQRVLQIASILRNLSFTPENAAVLGRSRSFLRFVLLCVRARWCNLHQLGFDILGNIANEIILKDAGERLTSVILSSVAKGIDSPDRFIVISCLEILNKVSQQDLNEETLTFGLDDSVYELICRFLALSDIALLVYTLECLYALTSLGERPCTSVARVRGAIDTLVALVTVEAQSYGPKACILMRVVETVSSVPASQQQQQQQQSPQVAQQSSPSQQQQSQTISAAAAAAASSSVHHHVSTAPSQGAPMATSVSEPTGPDGQVSSTGSPSGSGQVTEVVAVRLAPHQMQQVKQQQTVQTVQAAQVAQVQAQSHTQQAQAQSAQPIQATPTKAIAAGGSSRPSTPKAAAAKAAANSLQQQHTHQQIIQENEQFALGWLKATFELSPGVRIEQEELYKKYLGCCTKIGRRGVIAPLHFPRCVRSVFGGTIGPNPIKGENTGTLYYEGIRVRANPGQVTYPLKGVTRPNVTGAQAAENASGNVVTIVGGTSNVNSAKVQQQRNDSTPIQVTPSSPILKAQLSAPPKPSVHPDSPLSIAPSSAATGNIFPIEPRSQVSVAHPHLSQALLASGAQQQAGQQQQPQQVQVIVKDDGRGGTTSSSIIKSLLATKVTVAGECMQAVAVATSSSCVSAVPAITNATGVVSSISANQLITSNQVAQRQQQQQQQRQQQMQQTPGAIIGTKTIINAKGKPTIVAVKKIQRLNGAKVIVANNGEKPEAMDTDNGLHATTNQQTQLAIASIVPPTSIDSSNHVTGVMRVYRGPATQQVSLTTASSTTGTGKQSNQQLRNVCTPIVEDSDSTNNSLASSSGIGGSRDCSGVGAEEENSLTSFEGILLNGAPSNLDIDAQDDGSSKDSSSIGSKEKPSQSMMLADLLERKVEKEPIMNGVLGKKDLVENHIKKVLKESPGDVKIKAEVSEDALIEAPARLGIKRSGSTVTNEADESCDAKKPKYSNGTTSPDPAVVDSTTISSIKSEEQDDEKEEKVTVSSTAANLYAALAADIIDDETDLEEPSVKEEIKPVVKEEIKAEPSTPVAVKQVAVSQEQLQPVQQQVQVQTQVQPVQVQTVAQAQPQQHHPTHQTIAITQQQLQQQLQQGLIVAAAPRQIVVQQTIQSNNQIVTIPAMKSRPQHQIQPQVLQVQQGPGGQTHYVISGGVPGQNYVLAQPQTALVQGQAQTVLVAQQQGTNAKTIIILQPQAAAQPQAQKMVAVTPQGQQVVVTQVPRPLMQSPAMGNIPPPLVPTSGAISQASIVMNSAVAQQIQQQQDQIVSQQQTITQQKITQVQAQIQPAANTVTVVQTQQAAAVATTAGNSVPSRVVTPTPASTPPPTRPTTPRQAAATNQAPVTAPTKPQPQLIAPSPRTSTETKEVVMVTAATSTEPENTESTEGNNTKKSLTSQETSTSRPQSPATPMKTITVTLERNAFLCEWRGCFKQFKNPRKVYLHVVEAHCPTGNEETLCQWASCDGLKRRRFSLMTHLFDRHCCDEIMLMRRKQFDQSGKTEYLTSKPVASPTHHPGYAPNAALHAIKRHALEFVNPKELMQRPSKPAAANTSSSSPRPGQNPPPEQDDNEGPVTKSIRLTAALILRNLVIYSAHGRRHLRAYEPHLAGVALSNVESSRTIAQVLYDMNDQSSSGHR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01274265;
90% Identity
iTF_01274265;
80% Identity
-