Basic Information

Insect: Tricholauxania praeusta
Gene Symbol: Gyc89Db
Assembly: GCA_949775025.1
Location: OX459029.1:141314560-141327434[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.014 1.9 10.4 0.0 4 23 659 679 659 679 0.92

2 7 0.0051 0.67 11.8 2.1 2 23 1039 1061 1038 1061 0.95

3 7 0.019 2.5 10.0 1.5 1 23 1097 1119 1097 1119 0.97

4 7 0.00022 0.029 16.1 0.3 1 23 1125 1148 1125 1148 0.96

5 7 9.4e-06 0.0012 20.4 0.1 1 23 1154 1176 1154 1176 0.97

6 7 9.5e-05 0.012 17.2 2.7 3 23 1184 1204 1183 1204 0.97

7 7 0.0087 1.1 11.0 1.1 1 23 1210 1233 1210 1233 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.014	1.9	10.4	0.0	4	23	659	679	659	679	0.92
2	7	0.0051	0.67	11.8	2.1	2	23	1039	1061	1038	1061	0.95
3	7	0.019	2.5	10.0	1.5	1	23	1097	1119	1097	1119	0.97
4	7	0.00022	0.029	16.1	0.3	1	23	1125	1148	1125	1148	0.96
5	7	9.4e-06	0.0012	20.4	0.1	1	23	1154	1176	1154	1176	0.97
6	7	9.5e-05	0.012	17.2	2.7	3	23	1184	1204	1183	1204	0.97
7	7	0.0087	1.1	11.0	1.1	1	23	1210	1233	1210	1233	0.96

Sequence Information

Coding Sequence: ATGTATGGCATGATATATGAGAGTGTTCAACATTACGTACAAAGGGAGTATGGTGCTCATGTATGGAAACAAGTGTGCCAGATCATTGATTGCAAACataatacatttaaaacacATCAAATTTATCCGGATAAATTAATGCCTGATTTCGCTGCAGCCTTGTCCGCATGTACCGGtgaatcttttgatttttttatgaactttttcggACGTTGTTTTGTAAGGTTCTTCAGTCATTATGGTTACGATAAAATGATACGTTCGACTGGTCGTTACTTTTGTGATTTCCTACAATCTATCGATAATATACATGTCCAAATGCGTTTTACATATCCGAAGATGAAAAGTCCATCCATGCAGTTGACTCACATGGATGATGCAGGCGCGGTTATTGTATATCGTAGCGGACGAACTGGTATGTCTAAATATTTAATCGGACAAATGACGGAAGTGGCTGAAGAATTTTATGGCTTAAAAATTAAGGCATATGTAATTGATAGTCAAAATGATATTTGTGGCGGGACCTCAGGTCCAATCAAAATGACTGATGTCCCATTGACGGTTATTGTTAAATATCGCCTGGACTTCGATAATCGTGAGTATATGGCAAAACGTGTAAATGTCGTAGCGCATTTATCACAATTGAAATTGCCTCCCGTTAATATGAATGTGTTTCTGGAGCTATTCCCTTTCACTTTGGTGCTAAATCATGATATGAATATCATGCATGCcggtgaaaaaattgtcgaGACATGGATATTGCATAATCCGGGAAAGAACCCTAAGGGTTTTATTGGTGCTCATATAATGGAGCACTTCAAATGCCGTCGCCCAAAAGACATTCAAATCGAATGGAATGTTATAACTCAAATGCGTAcggttttatttgaatttgaactaCTGCGCACCGGAAGAAATCGCGCTGTTTATGATGCAGCTGCGTTGAATTTGGATTTCGAAAACTATGATGAGATGTCTTTTAATGAAGCGagaaattttgctgctgcttgTGCTAAGGCGGATGCTTCAACCGAAGGTAACGATGAAGATGAACTAGATCTAGCAACTGGTCAACGCAGAGAGCCACAAGGCAAATCCATTTTGCTCAAAGGACAAATGTTTTATATTAAAGATGTGGACTCTTTAATATTTCTGTGCAGTCCCTTAATTGAAAATCTTGACGAACTGTATGGTATTGGACTATATTTGAATGATCTCAACCCGCATGGGCTAAGTAGAGAACTTGTAATGGCGGGTTGGCAACATTGTTCAAAGTTGGAAATAATGTTTGAAAAGGAAGAACAACGTTCTGATGAGTTGGAAAAGTCATTAGACCTAGCTGATTCGTGGAAACGTCAAGGAGATGAACTGCTTTATTCAATGATTCCTCGTCCGGTAGCGGAACGGATGCGCAATGGTCAGGAAGCCTCATGCCAGAGTTTCGAAGAGGTTTCTATTATATTTATTGAGGTAATGAATGTCTACGCTGGTGATTCTAACAACATTCAGGATGCAATGACTGCAGTCAATACTTTAAATACAGTATTTACCGCATTCGATGAGGAAATCATTTCGCCACTTGTCTACAAAGTTGAAACTGTAGGTATGGTATATATGGCTGTGTCAGGCGCACCGGATGTTAATCCTCTGCATGCTGAACACGCAAGTGACTTAGCTCTGCGTATAGTTAAGAAAGTTAAAGCTCTCAAGATTCCCGATCTTGCGATTAAAATTGGCATTCATTCTGGTCCAGTAGTGGCTGGAGTTGTTGGGCTAAAAGTTCCACGTTACTGTTTATTCGGTGATACTGTTAATACCGCATCGCGTATGGAAAGCAGCGGCGAACCATACAAAATACAGCTATCAAATTATACAGCAAAGAAAGTACAGGATGCTGGCTACAAAATGGAATCCCGTGGCTTTGTCAAAGTCAAGGGTAAGGGTGAAATGGAAACATTTTGGTTACTGGAAGGGCCAATATGTGGTACATCATTTGGCCAGTGGACTTCATTTCTGCGTCATTTGGAAGAAGATCATAAAAGTTCGGAAATTGAAGAAttggaagagaaaaaaattaaggatgATGTAGACGATATAGATGACATAGAATTTAAACAAGAAGAAGTGCTCATTGAAATTGATCACAGACTTCCAGCAGAGGAACTGCATTCCGTATTTTTAAACACAAAGAATGAAATAGAAATTGCAAATGATGAACCGATGTTTGAAATTTTGGATGAGATTGAAAAACCCGTCCATAAGCTATTGGacaagcaaattaaattttctcatgGAGTGTTTGACGATAATATCGATTCGAATGGTTCAAATAACAATGCTGAAGAAAGTGAAACAGAATTCAAAAAGttcaAATTTAGTCTCAGTGATAAAAAATACCGTTCCATATCACTGGAATTCCTTAAAATCCTACGTAACAACAGATCTTTATGGGATACCCAACATAATGATTATCGAAAGCCACGTAAGCGATCGGCAGCGCAAAACCgaattaaatcatttttcaaCAGTAGAAATGTCGACATGAGCAACGAAGCGTTGCAAAATTTGATTACcagtattttagaaaaatatcaaaaggcACAGCAGGAAGAAGAAAATGAAGATATTAGCATAGAATcagcttttcttttaaaaaggtGCTCATTTTTGGAATTGTATGAAAACCCTGTTGATCGTATGGATCAAGACGAAGATAATGACAAAGAAACTGAATCTGAAAATAACATTGAAGATGAGCAAATTGAAACCAAAACAAAGATAAAAAACCGtataaaattttctgaatcGCATCCAATTGTTGAAGAATTTATCGATctttataaagaaaacaaagttcTGTGGGACACCACTTTGCATAATTACAACAATAGAATAGATCGTAAGCATATTTTTTCCGACTgggcagaaaaattcaaaacaaaatatgaaattgaatttaCCTATGATGAAATTGCATATGCTGCACTAGAATTTCGCCGCATTTATTACAAAGTAGTAAAACGGCGTGATGAAAATGATGAACTGGATAAGTATGCTAAATTCATTTTAGAAAAGGGCAGTTTTCTTCCACCTAAGCCACTGAAGCGGTATATTAAATGTCAACATTGCGTCAAAAATTTCCAACAGGACTACACACTTAAACGACATATATATGTGGATCACGGCATTGGTGAAATGCCATTTGCATGCTCATTTTGTGACCAGCGTTTTGAAGATTACTTTGTACATCGCAGGCATGAGTTGCGTTATCATTACAAAGACTACCAATATGTTTGTGAATActgtaaaaaacttttctttacaCGTGAAGAGCGGGATAGGCATTTGGCAAAACATACTGGTCAAAAAAGGTTCGTTTGTGAACTGTGTGGCAatccatttactaaaaaaataaatctgcgTAATCATGTCACACGAGTGCATATGCGACAACGCAATTTTCCTTGCACTTTGTGTCCGAAAGCTTTTTACACTAAGGCTCTACTTCAAGATCACATGAATGCTCATTTTAATATACGcgataaaatatgtaaaacatGTGGCAAAGGCTTTACATCTTATCATTCTCTCATGCGACATAAACAAATTCATTCGGAGGTGAAGCGTTACGCATGTAAATTGTGCGAGGCAAGGTTTCATCAACTCGTCGGTCTCAATTCGCATATGAAAAATACGCATAAATTTGTTAAGAACAAAAATGAAACAGCATCGGATGAAGAATTAAATTTAGTAGATTATAATGgttaa
Protein Sequence: MYGMIYESVQHYVQREYGAHVWKQVCQIIDCKHNTFKTHQIYPDKLMPDFAAALSACTGESFDFFMNFFGRCFVRFFSHYGYDKMIRSTGRYFCDFLQSIDNIHVQMRFTYPKMKSPSMQLTHMDDAGAVIVYRSGRTGMSKYLIGQMTEVAEEFYGLKIKAYVIDSQNDICGGTSGPIKMTDVPLTVIVKYRLDFDNREYMAKRVNVVAHLSQLKLPPVNMNVFLELFPFTLVLNHDMNIMHAGEKIVETWILHNPGKNPKGFIGAHIMEHFKCRRPKDIQIEWNVITQMRTVLFEFELLRTGRNRAVYDAAALNLDFENYDEMSFNEARNFAAACAKADASTEGNDEDELDLATGQRREPQGKSILLKGQMFYIKDVDSLIFLCSPLIENLDELYGIGLYLNDLNPHGLSRELVMAGWQHCSKLEIMFEKEEQRSDELEKSLDLADSWKRQGDELLYSMIPRPVAERMRNGQEASCQSFEEVSIIFIEVMNVYAGDSNNIQDAMTAVNTLNTVFTAFDEEIISPLVYKVETVGMVYMAVSGAPDVNPLHAEHASDLALRIVKKVKALKIPDLAIKIGIHSGPVVAGVVGLKVPRYCLFGDTVNTASRMESSGEPYKIQLSNYTAKKVQDAGYKMESRGFVKVKGKGEMETFWLLEGPICGTSFGQWTSFLRHLEEDHKSSEIEELEEKKIKDDVDDIDDIEFKQEEVLIEIDHRLPAEELHSVFLNTKNEIEIANDEPMFEILDEIEKPVHKLLDKQIKFSHGVFDDNIDSNGSNNNAEESETEFKKFKFSLSDKKYRSISLEFLKILRNNRSLWDTQHNDYRKPRKRSAAQNRIKSFFNSRNVDMSNEALQNLITSILEKYQKAQQEEENEDISIESAFLLKRCSFLELYENPVDRMDQDEDNDKETESENNIEDEQIETKTKIKNRIKFSESHPIVEEFIDLYKENKVLWDTTLHNYNNRIDRKHIFSDWAEKFKTKYEIEFTYDEIAYAALEFRRIYYKVVKRRDENDELDKYAKFILEKGSFLPPKPLKRYIKCQHCVKNFQQDYTLKRHIYVDHGIGEMPFACSFCDQRFEDYFVHRRHELRYHYKDYQYVCEYCKKLFFTREERDRHLAKHTGQKRFVCELCGNPFTKKINLRNHVTRVHMRQRNFPCTLCPKAFYTKALLQDHMNAHFNIRDKICKTCGKGFTSYHSLMRHKQIHSEVKRYACKLCEARFHQLVGLNSHMKNTHKFVKNKNETASDEELNLVDYNG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00258419;
90% Identity: -
80% Identity: -