Basic Information

Insect: Tricholauxania praeusta
Gene Symbol: salm
Assembly: GCA_949775025.1
Location: OX459030.1:18238717-18246975[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 6.3e-06 0.00083 20.9 0.9 1 23 510 532 510 532 0.98

2 7 1.3e-05 0.0016 20.0 2.1 1 23 538 560 538 560 0.98

3 7 0.021 2.8 9.8 1.5 2 23 918 939 917 939 0.98

4 7 9e-08 1.2e-05 26.7 0.5 1 23 945 967 945 967 0.98

5 7 0.00028 0.036 15.8 2.3 1 23 977 999 977 999 0.98

6 7 0.046 6 8.8 3.1 2 23 1426 1447 1425 1447 0.97

7 7 4.7e-08 6.2e-06 27.6 1.4 1 23 1453 1475 1453 1475 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	6.3e-06	0.00083	20.9	0.9	1	23	510	532	510	532	0.98
2	7	1.3e-05	0.0016	20.0	2.1	1	23	538	560	538	560	0.98
3	7	0.021	2.8	9.8	1.5	2	23	918	939	917	939	0.98
4	7	9e-08	1.2e-05	26.7	0.5	1	23	945	967	945	967	0.98
5	7	0.00028	0.036	15.8	2.3	1	23	977	999	977	999	0.98
6	7	0.046	6	8.8	3.1	2	23	1426	1447	1425	1447	0.97
7	7	4.7e-08	6.2e-06	27.6	1.4	1	23	1453	1475	1453	1475	0.99

Sequence Information

Coding Sequence: ATGCGAAGAAGAAAACCAATAGacaCCAATAGTGACCAAGAGGAGAACGGTTCATGTTCTCCCATTGCTACCACTGCCGCTAGTCCCAGTAGCGCCATTGGTGAAGATTTACACGAGAAGGATAATCTAATTGAAgagaatttaaataaagaaattgagACACATaattatgaacaaaatgacGAAGATCACAATCACAATAACAACATTGTAATGGCACAGCAGCAAATGCTGCAATTaaagtcaacaacaacaacaactagcgTAGCTAACGAATCAACAACGTTATCTACAAAACCAGCAACATATCAACAAGATATCGATAGTATAAATAGTAAATTTCCATCACCGACGCCACCCGATTTGGCGGAGAATAAGCAACCACCTACAAGATCACGCGAAGGATCACAAGAGCGTAACTATAAAAAATTGCTAGGGGTAACTGAAAGCAGTGCCATCGAACACACAATAGATAAAGAGAATGCGGAAGAGTGTAGAACTGAAGAATCAGCAGCTGTGCATAAGCCTTTGGAGGATATTGAAATGGAAGCAACAGAGGAGGAAGTTGCTGAGGCAGAAGATGAGGAAGATACAAATGAAGCATTAAAATCTTTATCTGCTGGCGCTGCTACTGAACCTGAAGCGGAGATTTCTTCTCCCACTGCTTCTCATTTGGTGATGCCATCTATTGCATCCGCCATAGTCGGCGGTCTACCAACAGCACTTGAGATGCCTCCACAATTTAGCGCAGGCCCAGTTACACTGGAAGCTATACAAAATATGCAAATGGCCATTGCTCAATTTGCCGCTAAAACAATCGCTAATGGTTCCACAGGAACGGATAATGAAGCTGCTATGAAACAATTGGCTTTCCTACAGCAGACGCTATTCAAtttgcaacagcagcagttgTTCCAAATACAACTCATACAGCAGTTACAATCACAGCTAGCGCTGAATCAAGCAAAGAGTAGCGAAGATGGCGATGATTTGGACGAAGAGCGTGAAGATGGCGAAGAAGATACCTATGAAGAGGAGGAACGCATCGCTGAGATGGAACTCCGCCAGAAAGCGGAGGCACGCATGGCTGAGGCAAAAGCCAGACAACATCTACTCAACGCTGGTGTACGCATGGATAGTGAATCGGTGGCGGCAGCAATGACGGAATCACTAAAACGTAAGCGAGAGGATGATACCGAGACGCCGTCGGATAGTCGACGTATGAGCATAGACGCTAGGCTGTCAAGTGCAGCTAAGTTGACAGCAGAATGCAGTGGTGTGGATTCGTTGTCAAAACTCaaagaaatggaaaatatgCCGCTACCTTTTGGCAACGACTTATCTTCCCGAATCATAACCAATCATGATGACCTGCCTGAACCCAATTCATTGGAAATGCTGCAAAAACGCGCCCAGGAAGTTTTAGATTCCGCGTCGCAAGGAATTTTGGCCAACAATCTCGCCGATGACTTTGCATTTAGGGATAGAAATGGCGAAGGCAAAAATCGTAATGAACCCTTTTTCAAGCATCGTTGTCGCTATTGTGGCAAAGTGTTTGGTTCCGATTCCGCACTACAAATTCATATCAGATCTCATACGGGTGAACGTCCATTCAAGTGCAATGTATGCGGCAGTCGTTTCACCACAAAAGGCAACTTGAAGGTGCATTTTCAACGTCATGCCCATAAGTTTCCGCACATACCAATGAATGCCACGCCCATTCCAGAGCATTTGGATAAATTTCATCCACCATTGCTGGATCAAATGTCACCGGATAGTTCGCCAACGCATACGCCGGCAGCAATGCCACACCATATGCCACCGGTTTCAATGGCGCTACAATTCCCACCAAGTGCCGCTTTCCCTGGGCTGCCAGGTTTGTACAGACCACCCATGGAAATTCTGAAATCGCTGGGAGCGGGTGCACCCGGCTTCCCAAGTTCACTATTTCCACAATTGTCAGCCATGTCTGATGGTGGTGCTGTTGCTGCAGCTGCTGTGCAAGCGCAGGCCGCAGCACAGGCGGCATTAAAACGTGATCAGGAAATGCCAACAGACTTACGTAAACCATCACCAACGCCAGACACCCCCGAACCTCCAACAGAAAGAACAACAGTGAAACAGCGCCAGAAAGAAGATGTGAACGAGAAAGCAACGACTGAACCAGCAACTGTTTTACCCTTAGACGTTAAAATCAAAGAGGAATGTATCGATACCGAGTCACAGAATGGTGATGACGATGATAAGCCACCACAATCGCCTCACACAGAAAATGCAAAATATCCTGCGGTGGTCAATTGTTCGGAGAATAAGCCAACACAAATGCCACAACCACCTTCGTTAATCAGCCTACCCCCCAAACCCATTGCGCTACCTCCAGTTGTGCAACCAGCACAGCCACCACACGGTATCATGCATCAACTGCCTTCACCAGGCTCCCACAATCATTTCGAATATATGCCCACACCTGGTCAGCTGCCTCCATCAATGCATCATCGTGAAGAATACTTTGCCGAACGCTTTCCGCTGAATTTCACCAAAACGCTCTCTCCCGAGCACCACTCTCCCATATGTTCTCCCGCCAACATTCCACGCTCGCCCTTCTTCAACCCGCTGAAACACGAAATGGCATTATTGCCACGTCCCCACAGCAACGACAACTCTtgggaaaatttcattgaagtaTCCAACACCTCAGAGACACTCAAGCTCAAAGAGTTAatgaaaaacaagaaaatcacCGATCCCAATCAATGTGTTGTCTGCGATCGTGTGCTGTCGTGCAAGAGCGCCTTGCAAATGCATTACCGCACGCATACAGGCGAACGGCCCTTCAAGTGTCGCATCTGTGGTCGCGCATTCACCACCAAAGGCAACTTGAAAACACACATGGCTGTGCACAAAATACGCCCACCTATGCGAAACTTCCATCAGTGTCCTGTCTGCCACAAAAAGTACTCCAATGCGCTCGTCTTGCAGCAGCACATACGCCTGCACACCGGCGAACCAACCGACCTCACACCAGAGCAAATACAAGCTGCCGAGATACGTGATCCACCGCCATCAATGATGCCAGGAGCATTCATGAACCCATTCGCCGCTGCAGCAGCCTTTCATTTTGGTGCAATGCCAGGTGGCGCCGCTGGCGGCCCCATACCTTTAGGACCACACAACGGCACATTGGGTTCAGAGTCATCGCAGGGCGATATCGACGACAACATGGATTGCAGCGATGATTTCGATGATGATGTCTCGTCTGATCATATGTCCAGCTCTCACGAACTTGATCTCATCGATCGACCCAAATCAGTTGACCACGACAGTTTCAAGGGTATGCTGTTCGAGCAGAAGTTGCGCATTGATTCGAAGGGCGTAGTCAATACAACACCACGCCCGCAATCTGCAGCTAGCAATGCAAATTCGGTCAATTCATCTGCACCAACCAGTCCGAATTGTAAACCAAAGACAACAACAACCGCGTCGTCGATGAGTCTAAGCTCGCCTGCACCTTCAGCATCGGAGGCCTCACAAGGTGCACTAGATTTGACACCACGTTCAGCGGCGGCGACGACGGCGCCTAATCAAGCAGCTTCGTCGCAATCACCCGCCCCTGGTAGAAAATCATCAACACCACCACTTTCAATAGCGTCGGCAACGACAACGACGCTGGCGACAGCTATGACAACAACTGCTGCTGCAATTAGCCCAAATCTTAATCCAATACATCAGCATCAACATCCTTCACAATTGAGCCCCGCTGCCAGTGCGCTTCCTTCGCCACTAACAGCAGCTGAACGCTTCCCCACCAGCCTGCATCATCAtttacaacagcaacatcaacatctAATGCATCAACAAGCAGCAGTGGCTGCGGCAGCGCATGCGCAGGCTCAAGCACAACATCATCATGCTGTGGCAATGCACCACGAGCAAATGCGACGTGAACAACAGCATCtgcatcagcagcaacaacagcagcaacatcattCTCCTTCTGCATCCGGCGCATCCTCATCACAATCTCAGTCACCGCGACAGCAGCATCAGTCGGTAACGGCGCCACCACCACCAACACTACCACCATCACAACAAGGACCACAGCTACCGAATCCATTGGTGGCGGCGCGTCCACCATTCGGCATGTTCCCCAATCTCCCGCTGTTTCCACCGGCTACTGCGCAAAACATGTGCAGCGCCATGAACACGATCGCACAGTCGGTGATGCCGGCGGCACCATTTAATCCACTAGCACTATCGGgCGTCAGAGGGAGCACAACCTGCGGCATCTGCTTCAAAACATTCCCTTGCCATTCGGCTTTAGAAATCCACTACCGAAGCCATACTAAGGAGCGTCCATTTAAGTGCACGATCTGTGATCGCGGTTTTACAACAAAGGGTAATCTTAAACAACACATGTTGACGCataaaattcgagatatggaaCAAGAGACCTTCAGGAATAGAGCAGTCAAGTATaTGAGTGGATGGAAGGAAGAATACGAATGA
Protein Sequence: MRRRKPIDTNSDQEENGSCSPIATTAASPSSAIGEDLHEKDNLIEENLNKEIETHNYEQNDEDHNHNNNIVMAQQQMLQLKSTTTTTSVANESTTLSTKPATYQQDIDSINSKFPSPTPPDLAENKQPPTRSREGSQERNYKKLLGVTESSAIEHTIDKENAEECRTEESAAVHKPLEDIEMEATEEEVAEAEDEEDTNEALKSLSAGAATEPEAEISSPTASHLVMPSIASAIVGGLPTALEMPPQFSAGPVTLEAIQNMQMAIAQFAAKTIANGSTGTDNEAAMKQLAFLQQTLFNLQQQQLFQIQLIQQLQSQLALNQAKSSEDGDDLDEEREDGEEDTYEEEERIAEMELRQKAEARMAEAKARQHLLNAGVRMDSESVAAAMTESLKRKREDDTETPSDSRRMSIDARLSSAAKLTAECSGVDSLSKLKEMENMPLPFGNDLSSRIITNHDDLPEPNSLEMLQKRAQEVLDSASQGILANNLADDFAFRDRNGEGKNRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAHKFPHIPMNATPIPEHLDKFHPPLLDQMSPDSSPTHTPAAMPHHMPPVSMALQFPPSAAFPGLPGLYRPPMEILKSLGAGAPGFPSSLFPQLSAMSDGGAVAAAAVQAQAAAQAALKRDQEMPTDLRKPSPTPDTPEPPTERTTVKQRQKEDVNEKATTEPATVLPLDVKIKEECIDTESQNGDDDDKPPQSPHTENAKYPAVVNCSENKPTQMPQPPSLISLPPKPIALPPVVQPAQPPHGIMHQLPSPGSHNHFEYMPTPGQLPPSMHHREEYFAERFPLNFTKTLSPEHHSPICSPANIPRSPFFNPLKHEMALLPRPHSNDNSWENFIEVSNTSETLKLKELMKNKKITDPNQCVVCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSNALVLQQHIRLHTGEPTDLTPEQIQAAEIRDPPPSMMPGAFMNPFAAAAAFHFGAMPGGAAGGPIPLGPHNGTLGSESSQGDIDDNMDCSDDFDDDVSSDHMSSSHELDLIDRPKSVDHDSFKGMLFEQKLRIDSKGVVNTTPRPQSAASNANSVNSSAPTSPNCKPKTTTTASSMSLSSPAPSASEASQGALDLTPRSAAATTAPNQAASSQSPAPGRKSSTPPLSIASATTTTLATAMTTTAAAISPNLNPIHQHQHPSQLSPAASALPSPLTAAERFPTSLHHHLQQQHQHLMHQQAAVAAAAHAQAQAQHHHAVAMHHEQMRREQQHLHQQQQQQQHHSPSASGASSSQSQSPRQQHQSVTAPPPPTLPPSQQGPQLPNPLVAARPPFGMFPNLPLFPPATAQNMCSAMNTIAQSVMPAAPFNPLALSGVRGSTTCGICFKTFPCHSALEIHYRSHTKERPFKCTICDRGFTTKGNLKQHMLTHKIRDMEQETFRNRAVKYMSGWKEEYE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00258298;
90% Identity: iTF_00972499;
80% Identity: -