Basic Information

Insect: Tricholauxania praeusta
Gene Symbol: RREB1
Assembly: GCA_949775025.1
Location: OX459028.1:166921233-166928114[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.011 1.5 10.7 0.7 1 21 296 316 296 318 0.95

2 13 0.00074 0.097 14.4 0.2 1 23 328 350 328 350 0.97

3 13 3.3e-05 0.0043 18.7 7.5 1 23 356 378 356 378 0.98

4 13 1.5 1.9e+02 4.0 3.9 2 19 645 662 645 662 0.97

5 13 0.23 30 6.6 0.2 1 21 708 728 708 729 0.94

6 13 0.012 1.6 10.6 0.1 1 23 902 924 902 924 0.97

7 13 2.7e-05 0.0036 18.9 1.2 1 23 934 956 934 956 0.99

8 13 0.0012 0.15 13.8 2.0 1 23 962 985 962 985 0.97

9 13 0.0042 0.55 12.0 2.0 1 23 1341 1364 1341 1364 0.95

10 13 0.00012 0.016 16.9 0.3 2 23 1685 1706 1684 1706 0.97

11 13 0.2 27 6.7 6.3 1 23 1712 1735 1712 1735 0.97

12 13 0.012 1.5 10.6 0.5 3 23 1923 1943 1921 1943 0.96

13 13 0.002 0.26 13.1 4.8 1 23 1949 1971 1949 1971 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.011	1.5	10.7	0.7	1	21	296	316	296	318	0.95
2	13	0.00074	0.097	14.4	0.2	1	23	328	350	328	350	0.97
3	13	3.3e-05	0.0043	18.7	7.5	1	23	356	378	356	378	0.98
4	13	1.5	1.9e+02	4.0	3.9	2	19	645	662	645	662	0.97
5	13	0.23	30	6.6	0.2	1	21	708	728	708	729	0.94
6	13	0.012	1.6	10.6	0.1	1	23	902	924	902	924	0.97
7	13	2.7e-05	0.0036	18.9	1.2	1	23	934	956	934	956	0.99
8	13	0.0012	0.15	13.8	2.0	1	23	962	985	962	985	0.97
9	13	0.0042	0.55	12.0	2.0	1	23	1341	1364	1341	1364	0.95
10	13	0.00012	0.016	16.9	0.3	2	23	1685	1706	1684	1706	0.97
11	13	0.2	27	6.7	6.3	1	23	1712	1735	1712	1735	0.97
12	13	0.012	1.5	10.6	0.5	3	23	1923	1943	1921	1943	0.96
13	13	0.002	0.26	13.1	4.8	1	23	1949	1971	1949	1971	0.99

Sequence Information

Coding Sequence: ATGCTTAAGACAGCAGCACCagcgccaccaccaccaccgcctACAATACCACAAAggaatgcaacaacaacagtggcTACACAACTGACTACTACTGCAATAAAGTCAcagcaacaaccacaacaacaatacaCAGAAACTACTTCCATTAAAATGGAACGCCGTGAATCAACCACATCCGAATCCTCCTTAGAACATTTAGATCTGGGACACACACCAAAGAAGCTCAATACGCACTCATCGGCCACATCAACACCACACGTGGTGGGTGCGAGCGGCAAAggcagcatcagcagcagcaacaacaacatcaacagtaCAACGCCATCAGAAGCACAACCACCACGCCGCCATTCTGCACGCCAGCAGCCAGAACAACCCATGTTGCCACATGACTCTGATGAGACAAATGACTATGATGACGATGAGTCAGCGGATGAGAAGCGTCACCACAGCAGTAACGCCCACAATTCAACACGTTCACTGCATCGACATCACCATCATAAGCGACGTAGTAGTGGACGCTTGGATAAACGTAGTGTTCAACTGGTCGATTACAATTCAGAGAACCCAAATTCACTACgtaagaaatttcgttttaatcgCAGCACTGCCGTTGCTGAGGTGACAAACAATGAATCGGGCTTTGTTGATGGTAGCAGTAGCAGTCAACTGTTGAACTCCAGTGTGATATCAACGATAACCAGCGCTGCTGCAGCTCAATCATCACATCTATCGCATCCGCATCATTCGCCGCCTGCAACTTCTGCTACTGGTGGTTCTCAAAGTTCATCGGCCTCATCTTCACCACATGGCGGTGCTGGTGCATCAGCGTCAGCATCATCAAGTCCAGAATCAGGCATTGGTGAACGTGATGACATGAAGTTTGTATGCCCCATATGTGAGGTTGTGTCTGCGACACCACATGAGTTTACCAACCATATACGATGTCACAACTATTCATCTGGTGATACAGAAAATTTTAGCTGTCGCATTTGCTCAAAGgttCTATCATCTGCATCCTCTCTCGATCGACATGTCCTCGTACATACGGGTGAGCGTCCCTTCAATTGCAAATATTGTCATCTCACGTTCACCACCAACGGTAACATGCATCGGCACATGCGCACTCATAAACAGCATCAACATAATCATCATCATCGCCGGAATTCAAATGGAACAGCAGCGAAGCAATCgagtggcagcagcagcaacaaccacAACGCAACAGCTGTGGCTGGTACAACGCAACTTACACCTGTTACCTCCGCAAACGCAGCCACATCCGCATCTGTTAGCACGCAATTAACCAATGGCAGTGAAGGTGTTAAAACAGCAGCATCActcacaacaacagcaacaaacataAGCATGGCGCCCACGACAATTGtaacagcagtagcagcagcagcagccaacGGTACAGGTGCTAATGTTAGACGCTTaaacggcaacaacaacaacaacacaaacagcagcaacaacaatggcGTAGAAAGTTACGAAAGCGATGGTGGTTGCTCAACAGATTCATCAAGTGCCATCAGCCAGCAGAGCTCAAATAATCATAAtcacaataataacaataataatactaactccaacaacaataacaacataaaagctcacaacaataacaatttcaaACGTAAAAACAGCGATAACATAGACGAAGAGATTACGTTGATGAAACGACGCGTGAAGACCACAATTAACAACAACACTATAATCGATGTTGGCGATGAAAATCAACGACGTCAGTTCGATGTGGTGTCAGCTTCAGCCTCAGCTGCCGTAGCTGATGATCACACGcacttacaacaacaacaacaacagcatcttTTCGTTTGCCCCGTTTGCAATGCGAGCGAATTTGATTCAATGCTTTCGCTCAGCGCTCATATTGATAGCGAACATTGCGATATACCCGCCAAGTGCCGTCACTGTGATGTTGTCTTCCATACGCATCGACAGTTGAACTTACATCCGTGCACTGgcaaattgaaaattacatCTGGCTTTAAGGATCTCACCTTTGCCGATTTCTCTAGTGAAAAATTCCCGCTTATTGCCAAATCACTCTGTGAACAGAATCTACGTGCTGCAGCTGTAAGTCAGAAGTTTGAATGTGCGCGGTGTAATCGCGCTTTTTCCTGTGCCAGTGCTTTGGAAATGCATGCAAGAGAATGTGAGCAGTCGTTGCGACTCTACAGCAGTCAAACGGATTTGAATATCACATCAAATCATATGAAACGCACAACAAAAGTTCGTAGTGTCAGCGAAAGTTCTGCTGgtattgatgatgatgatgatgcagaAGCTGAGAACGAGGCTGAAGAAGAGGAGCAAAACCGACGTGAGCAGTTCTTTAAGCATTTGTATTTGAAGAATAGATCTAATCACCACCAATCACTTTGCGAATCCCCTCAGCATTCTACGGACGGTGATGAGCAACTTGATAGAGATATTAAATACGAGACCGATTGCGAGAAGTTGGCTCAACAGTCACACGACTCCTCCAAAGATCTTGCCGATATTCAATCCATACTCAATATGACTTCTTCATCGTCCACATCGAATTTTCTGAAGAACTTTGAGCAAACAGTTAATACACCATCCAGTAATTATGGACTGGACAAAGATGAAGAGGAAGCCCAAGACGCTTTTACTTCTGAGTTCCGCAAAATGAAGCTACGTGGAGAGTTTCCTTGCAAACTTTGCACTGCTGTTTTTCCGAATTTGCGTGCGCTTAAGGGTCATAACCGCATTCATCTGAGCGCTGCTGGTCCCTCAGGACCTTTTCGTTGCAACATGTGTCCATACTCTATATGCGACAAGGCAGCCCTTGTTCGCCACATGCGCACTCATAATGGCGATCGTCCGTATGAGTGCGCTGTTTGCAATTACGCATTCACAACAAAGGCGAATTGCGAGCGGCACTTACGCAATCGCCATGCAAAGACAACACGCGATGAAGTCAAACGTGCCATTATTTATCATCCTTCGGAAGATTCATCTTGTGATGATCCAACCAAAAAATTGCATCTTTTCTCATCTCCAGAATTTGATGATGATGTCGACTTGCATTACCAACATCATCAACCCAAAGATCGCTCCACACCTGTGTCGCATTTAAAAGAAATGCTGACTAGTGATATTGGTGATCCATGCAGCAAGGCTATGAAAATTCAAGTGAAAAGCCTGGAACAACTTCTTGACAAGACTACTGCTTCATCCAGTTATAATGAAACTTACGAAGAGCGACAAATACAAACAAACCATCATCTCGCAGAATCTTCACCAATTGACTTGAGTATGGATGTTTTGGACTTGAGTAAAAAGCCATCAAAACCAGTCTCTGTCAGTGAAGAGCCAATACGTTCCGTTTCATCTGCGTCAACCGTTATGTCAGAGCCGCAAACGTTGCCATTACAATCCCTCGAAGGAGCAGATAGTTCTAAGTTTGATATatctattttagaaaaaaaccaacaataTTTAATGGCACAACAACAGCTCATTAACGATGCCCTACCGAAAATTGTTGATCCGGCCCATTACTTTCAACAGCTCTACCGGAATTTGGTATTTCCACCTATCAATCCATTGAATCCATTCTTTTTGCAAAACTCATTTCTGCCGAATAATTTGGGAGACTTGCAAAAATATGCCCCTTTAATGAGTCGCATGTTTGGTTCTCCACCAGTAGTACCTAGTCCGCAAGACACTTCAAAGACAAATGCAAACGTTCCATTAAATCAAACTTCAACTCTTTTGCCGCAAATTAGCCCTCTCATGTCGGAAAAGTCAAGCATTTCTTCTTTGAGTTCAGCATCTCCAGTGAATTccaatcaaattttatcaaaaacacTTGGCTCTTCTTCTTCTGCGACGCTTAATATTCCGCGGCATCCACACATTCCACAGACAGTTCTACCAGGTGGACCAGTAAAAATGGTAATTAAAAATGGTGTCCTAATGCCGAAACAAAAGCAAAGACGTTATCGCACTGAGCGTCCATTTGCATGTGAACACTGCTCAGCACGTTTTACTTTGCGTTCCAATATGGAACGTCATGTGAAGCAACAGCATCCACAGTTTTACGCACAACGTCAACGCAGTGGGCATCACATAATGCGAGGCCGTGGTGCCAGCAGTGCAGTTGCAATGAATAGCATATCTCATTTACAGGCTGCTATTGCAGCACACAATGGTGGAGCTAATGTTGGTCCAGCATCTATTTCGGAGCAAGTGAAGTATGCCATTTTAGCACAGCAGTTAAAAGCACGCAAGGACACAGATTTGCTGCAGCAGGCACTAGCACATGGCTCCAGTAGCGTAGCACCTAGTCATTTACTTTTGGGTTCAGCTGGAAGTTTACCTCAAGTTTCTCACGATCATCAACTTAATTTGAGTCACTTAAACCACTCAAATGCTAATGGATCCATGGAGGATGATGACCCCAAGCTTGTTATTGATGAAGACGATGATATCGAAGAAATTCCTGATGACGAAAATGATGAAGATCAATTTCAAGATCAGGAAGATGAGTTGAATGAGAGCTTCTACGATGAAGAACCACTACTTTCTACTATTGAAGCAAACACAATCAAAGTTGAAACAACAAAAGAAGCAAATGAATCTGCAAAAAAAGTAGCTGAAACAATACTTGAACAGGCAATCAAAGCTTCAGGTACCACAAGCTCCAAGCCAGATACGACTGCACCAGCTGCCACAACAATGAAATCTATGATTGCTCAAGCAGAATCAGTTGGGAAATTTCTCAAAGAAGTTGCTAGTTCTCCATTCAAAGATGAATCTCAAGACTTAGTTCCTGTCTCGAAATTAGTAGACAATGCAACCACCAATTCAATGTCATTCAATAACTATTTCCGCCCCAGCGACGTTGCCAACCACATGGAACAAAGTGATGAAGAAGGCTTAGTAGCCTCCGGCAGTGCATCTGAAAGCAATAATTCAGGTACAGAAGACATATCAACGTCTGCTGAACCAAAAAAGAAATCTGCTTATAGTCTTGCACCAAACCGTGTATCATGTCCATATTGTCAACGAATGTTTCCTTGGTCCAGTTCGCTGAGACGTCATATACTGACACATACTGGTCAGAAACCATTTAAATGTTCCCACTGCCCGTTGCTCTTCACAACCAAAAGCAATTGCGATCGACATTTACTGCGCAAGCATGGAAATGTTGAATCAGCTGTTTCTGTCTACGTGCCGACAGAAGATGTAAATGAACCAATACCAGTTCCTAAGTCAGTTGAAGAAATTGAGCAGCAACAGCGACAACGTGAAGAAGAAGAACGTAAACGAAAAGCACTAGAAGCAGCTCACTTGGAGAAAGAACGACGAGAGAAAGAGCAGCGCCAACAGCATGAActtgaacaacaacaacttctCAAACaacttgctgctgctgcacaaTTTAGTCAATTGTCTCAGACGCAAACTACTGCACAAGCCAATAGTCCTAAAATCGATATTAACTCAGTTCAATCCTCATCGGAACTTCCTTTCAAATGTCACCTCTGCGATTGTTCCTTTGGTGAACGTTTTCAATGCTTAGACCACATTAAAATCCAACACGCCCATGACTTTGCATTATTGTTAGCCAAAGGTGCGATCGACACTGATCCAGAGCCCAGTCAAGTTCCGTGCACAGAAGATGAAGAAAAACGTCCCGGAGATGAGGGCAATAACGGTCGGATAGGAAAGTATCCCGATTACAGCAATCGTAAAGTTATATGCGCTTTTTGCGTGCGCCGTTTTTGGTCAACCGAAGATTTGCGACGTCACATGCGTACACATTCAGGCGAACGACCATTCCAATGTGATATCTGTTTACGAAAGTTTACGCTGAAGCATAGTATGCTGCGACACATGAAAAAGCACAATGGTCGCCATCACAGTGGCCTCAGTTCAAGTGATCTCTCGAATGCGGCAAACAGTGGCTCTGATCTATCCGATGATGAACGTGAAATGCCAATGCCAGCAGCTAACTCTCTAATGACAGCCAATTCTTTAACtatgaaaactcaaaaaattcaaGAGTTGCTTACCAAAGCGAATGAGTGGCGGCAGAATCACATGACGATGGcagaacaaaaagaaaatatagctGAGGAGCAGCACAACAATCAAACGGATCTCATAGCGAACCTTTTGGGCATAAGCGATCAGAGCATATTGAATAAATTGCTCTCATCTCCTGATGAAGCAGCCAAATTTTTAGGTGTAGATAAATAA
Protein Sequence: MLKTAAPAPPPPPPTIPQRNATTTVATQLTTTAIKSQQQPQQQYTETTSIKMERRESTTSESSLEHLDLGHTPKKLNTHSSATSTPHVVGASGKGSISSSNNNINSTTPSEAQPPRRHSARQQPEQPMLPHDSDETNDYDDDESADEKRHHSSNAHNSTRSLHRHHHHKRRSSGRLDKRSVQLVDYNSENPNSLRKKFRFNRSTAVAEVTNNESGFVDGSSSSQLLNSSVISTITSAAAAQSSHLSHPHHSPPATSATGGSQSSSASSSPHGGAGASASASSSPESGIGERDDMKFVCPICEVVSATPHEFTNHIRCHNYSSGDTENFSCRICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHNHHHRRNSNGTAAKQSSGSSSNNHNATAVAGTTQLTPVTSANAATSASVSTQLTNGSEGVKTAASLTTTATNISMAPTTIVTAVAAAAANGTGANVRRLNGNNNNNTNSSNNNGVESYESDGGCSTDSSSAISQQSSNNHNHNNNNNNTNSNNNNNIKAHNNNNFKRKNSDNIDEEITLMKRRVKTTINNNTIIDVGDENQRRQFDVVSASASAAVADDHTHLQQQQQQHLFVCPVCNASEFDSMLSLSAHIDSEHCDIPAKCRHCDVVFHTHRQLNLHPCTGKLKITSGFKDLTFADFSSEKFPLIAKSLCEQNLRAAAVSQKFECARCNRAFSCASALEMHARECEQSLRLYSSQTDLNITSNHMKRTTKVRSVSESSAGIDDDDDAEAENEAEEEEQNRREQFFKHLYLKNRSNHHQSLCESPQHSTDGDEQLDRDIKYETDCEKLAQQSHDSSKDLADIQSILNMTSSSSTSNFLKNFEQTVNTPSSNYGLDKDEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRIHLSAAGPSGPFRCNMCPYSICDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSSCDDPTKKLHLFSSPEFDDDVDLHYQHHQPKDRSTPVSHLKEMLTSDIGDPCSKAMKIQVKSLEQLLDKTTASSSYNETYEERQIQTNHHLAESSPIDLSMDVLDLSKKPSKPVSVSEEPIRSVSSASTVMSEPQTLPLQSLEGADSSKFDISILEKNQQYLMAQQQLINDALPKIVDPAHYFQQLYRNLVFPPINPLNPFFLQNSFLPNNLGDLQKYAPLMSRMFGSPPVVPSPQDTSKTNANVPLNQTSTLLPQISPLMSEKSSISSLSSASPVNSNQILSKTLGSSSSATLNIPRHPHIPQTVLPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHIMRGRGASSAVAMNSISHLQAAIAAHNGGANVGPASISEQVKYAILAQQLKARKDTDLLQQALAHGSSSVAPSHLLLGSAGSLPQVSHDHQLNLSHLNHSNANGSMEDDDPKLVIDEDDDIEEIPDDENDEDQFQDQEDELNESFYDEEPLLSTIEANTIKVETTKEANESAKKVAETILEQAIKASGTTSSKPDTTAPAATTMKSMIAQAESVGKFLKEVASSPFKDESQDLVPVSKLVDNATTNSMSFNNYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDISTSAEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSVYVPTEDVNEPIPVPKSVEEIEQQQRQREEEERKRKALEAAHLEKERREKEQRQQHELEQQQLLKQLAAAAQFSQLSQTQTTAQANSPKIDINSVQSSSELPFKCHLCDCSFGERFQCLDHIKIQHAHDFALLLAKGAIDTDPEPSQVPCTEDEEKRPGDEGNNGRIGKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHNGRHHSGLSSSDLSNAANSGSDLSDDEREMPMPAANSLMTANSLTMKTQKIQELLTKANEWRQNHMTMAEQKENIAEEQHNNQTDLIANLLGISDQSILNKLLSSPDEAAKFLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00972467;
90% Identity: iTF_00972467;
80% Identity: -