Basic Information

Insect: Tricholauxania praeusta
Gene Symbol: -
Assembly: GCA_949775025.1
Location: OX459028.1:160774792-160779043[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 4e-05 0.0052 18.4 0.1 1 23 250 272 250 272 0.98

2 7 0.00081 0.11 14.3 1.9 1 23 338 360 338 360 0.97

3 7 1.4e-06 0.00018 23.0 1.3 1 23 366 388 366 388 0.96

4 7 5.3e-06 0.00069 21.2 2.3 1 23 394 416 394 416 0.99

5 7 1.8e-05 0.0023 19.5 1.7 3 23 424 445 422 445 0.96

6 7 3.1e-06 0.00041 21.9 0.8 2 23 451 472 450 472 0.96

7 7 1.9e-05 0.0024 19.4 2.3 1 23 478 500 478 501 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	4e-05	0.0052	18.4	0.1	1	23	250	272	250	272	0.98
2	7	0.00081	0.11	14.3	1.9	1	23	338	360	338	360	0.97
3	7	1.4e-06	0.00018	23.0	1.3	1	23	366	388	366	388	0.96
4	7	5.3e-06	0.00069	21.2	2.3	1	23	394	416	394	416	0.99
5	7	1.8e-05	0.0023	19.5	1.7	3	23	424	445	422	445	0.96
6	7	3.1e-06	0.00041	21.9	0.8	2	23	451	472	450	472	0.96
7	7	1.9e-05	0.0024	19.4	2.3	1	23	478	500	478	501	0.95

Sequence Information

Coding Sequence: ATGGGCAAGGAATACCAATCGTGCCGTGTGTgcttaaataaaacgaaaagttCAATACCTTTGAATACCAGCAGTAAAAAGTCGTCAGAGTTAATTTATATCTGTATGTTTAACATGTGTACTCAATTGAAAGCTGCGACAGATGATGCACTACCACAACACTTATGCACATCCTgcaacaataatttaattattgccTTTGATTTCCTACAATTGGCGCAAGACTCTGATTGTAAACTAAAACAATTATATGAGGGCAGTAGACAAACACGTTCCGGCAAAAATAACCAGCCGCTAGCCAAGACTGACTTGCTTCAAATTCATGAAGTCGATAAGAGTTGCGTTGAAAAAAACAGCGCTATGGTTATGGGGAGCAATGCTAATGTAGAATTCATAACCAGTGCAAGAGATCCATTAGAAGAAACTGATGAGGAAATTGATGTGGAACGCAACATTACAGGTAAAAACTCGCAAAAACACATCTCGAAAGAAGACATTTGGAGTGAAAGCGATAgtgcaaataaaataacaagCGATGTTGAAGATGAAGACAATAAGCCTTTAGGGGAACTAATAAAAAGtgctaAAACGCTGCAAATGAAGAAAAGGAAAATTTCAATAGATAGCAACTTAAGTAATGAGCTTTTGTACAATTTTAATGCCGATGAAGATCAATACAATAGTCCATCCGAATCCTTACCCGACTTAAATGCATCTCCTGAAGAACAACTCTTTCCGCAAGGTCGTTATAAATGCCAAATATGTGACAAAACATATTTTACAATTGCCGGCCTCAAAGTACACATTGCTATACATTTACCAAAAAAggctaaaataaaaactaaattgcgTGGTCCTAACAAAAGACGTAATAAAGTCCCAACACTAGAAGAAGTTGTTTCACAAGACTTAAAAGACAATCTTACGAAATGCAACAACATTGACATTGATGAAGGTACCAATAATAAAGGCAATGTGCGAAAGAGAAAACTTCCAAAacccaaaaaaatgtttccttgtCATGTTTGTGGGAAGCATATGATATCAGCCTCAAAATTGCGATACCACATGGTAATGCATACTGGAGAAAAGGATTATTTATGCACAATATGCCCTAAGGCCTACTCAACAATTTATGCACTCAAACATCATATGCGCACCCACACCGGTGAACGTCCATACGAATGTAAATTCTGCGGTGATAAATTTACACGGCCGACAACACTCAAAAGTCATATGCGCCGACATACCGGCGAGCGACCATATGGGTGCGATATATGTGGTAAACGATTCATACAGCACTCATCAATGACGACTCACATGAAACTCAATCATATGGCGAAAACGATACCATGTCCACATTGCGATAAAAAATATGCGCGTCAAACAGATTTGACAACACATTTACTTAGCCATACTGGTGATAAGCCATTTTCATGTCAGCTATGTCCAAGCCGTTTTATACGTCAAGCAAATCTTAATAAACATATGAACCAACATCATACGAATAAAGGCGTTGCATCGTCATCATcgtcaaaagaaacaaaaaagttgcaaaaaatagGGAAAAACATGGTTATGGTTGAGAAGTATCCAGTTTCTCAAAATGAAGAATCTATTGCCAAATACTCTGCTACCTCCACTGAAGATACTTTGCCCGGCACAGCACCTTTCAATCCGCTTTCTGAATCCATTCCTTCCATTATAGGTCGTGTCGCGGTTTCGATTGATCAACCAATATCTACTCCTCTTTTGCCTTCTATATTTAGTTCAAATAACCGGTAA
Protein Sequence: MGKEYQSCRVCLNKTKSSIPLNTSSKKSSELIYICMFNMCTQLKAATDDALPQHLCTSCNNNLIIAFDFLQLAQDSDCKLKQLYEGSRQTRSGKNNQPLAKTDLLQIHEVDKSCVEKNSAMVMGSNANVEFITSARDPLEETDEEIDVERNITGKNSQKHISKEDIWSESDSANKITSDVEDEDNKPLGELIKSAKTLQMKKRKISIDSNLSNELLYNFNADEDQYNSPSESLPDLNASPEEQLFPQGRYKCQICDKTYFTIAGLKVHIAIHLPKKAKIKTKLRGPNKRRNKVPTLEEVVSQDLKDNLTKCNNIDIDEGTNNKGNVRKRKLPKPKKMFPCHVCGKHMISASKLRYHMVMHTGEKDYLCTICPKAYSTIYALKHHMRTHTGERPYECKFCGDKFTRPTTLKSHMRRHTGERPYGCDICGKRFIQHSSMTTHMKLNHMAKTIPCPHCDKKYARQTDLTTHLLSHTGDKPFSCQLCPSRFIRQANLNKHMNQHHTNKGVASSSSSKETKKLQKIGKNMVMVEKYPVSQNEESIAKYSATSTEDTLPGTAPFNPLSESIPSIIGRVAVSIDQPISTPLLPSIFSSNNR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00972451;
90% Identity: -
80% Identity: -