Basic Information

Insect: Tricholauxania praeusta
Gene Symbol: ham
Assembly: GCA_949775025.1
Location: OX459030.1:2938954-2969497[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.16 20 7.1 0.0 2 21 407 426 406 429 0.86

2 9 0.004 0.52 12.1 4.1 1 23 436 459 436 459 0.93

3 9 1.7e-07 2.2e-05 25.9 2.4 1 23 465 487 465 488 0.96

4 9 3.3e-05 0.0043 18.7 2.6 1 23 494 516 494 516 0.95

5 9 5.6e-05 0.0073 17.9 5.0 1 23 522 544 522 544 0.99

6 9 0.00026 0.034 15.8 1.1 2 21 552 571 551 572 0.95

7 9 8.8e-09 1.2e-06 29.9 1.3 1 23 1055 1077 1055 1077 0.99

8 9 4.7e-07 6.1e-05 24.5 0.9 1 23 1083 1106 1083 1106 0.97

9 9 8e-05 0.01 17.4 6.6 1 23 1112 1134 1112 1134 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.16	20	7.1	0.0	2	21	407	426	406	429	0.86
2	9	0.004	0.52	12.1	4.1	1	23	436	459	436	459	0.93
3	9	1.7e-07	2.2e-05	25.9	2.4	1	23	465	487	465	488	0.96
4	9	3.3e-05	0.0043	18.7	2.6	1	23	494	516	494	516	0.95
5	9	5.6e-05	0.0073	17.9	5.0	1	23	522	544	522	544	0.99
6	9	0.00026	0.034	15.8	1.1	2	21	552	571	551	572	0.95
7	9	8.8e-09	1.2e-06	29.9	1.3	1	23	1055	1077	1055	1077	0.99
8	9	4.7e-07	6.1e-05	24.5	0.9	1	23	1083	1106	1083	1106	0.97
9	9	8e-05	0.01	17.4	6.6	1	23	1112	1134	1112	1134	0.98

Sequence Information

Coding Sequence: ATGTCACGATCCCATCGCGATCGTCAATCGCTTGTTGTAGATAGTGAAATACGATTTGTTGTCTCTCATCGCATCGCTGCTGTCAATCACTGTGTCACTGATAGTTGCGGGCAGCACGTCGCGTCTGTAGCTCCTTCATATGGCAAGCCACCAACGCAGGCCAGCCCACAGTTGAAAGCGATGATACCAGCCAACGGTGACGAATACGATTCCAGCGCACATCATCACAACCTTGTAAATTTTCATCACAACGAATTGCATCCACAACTGGTGGCAACGGGTGTTCCGCCCTATGCCAAGGAGGCTTTTGAGTTTAAACATCATCTAGCAACAACACTGCAACACAACGGTCATAATTTACCCCTGCAAACTCCTCACAATCACCACAGCAATAACAGCCGTATTGGGGCTGTTGGCGGACCTCAGAACTATTCACTGAGTCCGAATAACTCCGGTGATTCAACAACCTCGCCAGCGCCGTTACGTTCTCCAACAAGAACGACAACACCAACACCGTTGCATGTTTTGCAAACAGCAACGCCTGGTGAATTGTCGCGTCACCCGCCACCGCATTTGCACTCTGCAGCCCCTGCGAACCCACTGCAGCCCAATATGGATCAACTGTTTAATAGTAAAATGCATGCGGAGCGATTTCTTTCAGAAATGGCACGCCTGCAGGAACCCATCTGTGATTTGAATATCAGCGATAGGGGCGTCTTTGCTAAGGTGCCGCTGCATCGTAGCACACGTTACGGTCCGTTTGCGGTTAAGTTGTGCAGTGACCCAACGGATCGGAAGCTCGCATGGGAGgtcATAGCGAGTCCGCATTTTCGTGGTTGGTTAGAACCAATGCCTGAAATCTCAACGTGGCTGCGAAAAATACGTGCTGTACTTACATCGAAGGAGgcgaatttgaaaaactttctaGTAGCAGGATATCTTTGGTATGAAACGAGTCGCGATATTGCGGCCGGCGAAGAAATCACCATCGATGGACGTCCCAAGACACCGttacatttgaatgaaaattttttaaattcaagtgGAAATGCTGGTTCTGTGCATGGTGATGACAAAAGCGAACGTGAAAATGgATCTCAATATAGCGGTAATACTACTGGAGACGACGAAATCAATACATCGACTAACGAAAACGAAAAGCAGTACCCAGAACAAACAGATTTGCATTTTTCGGATGATGAGCACGGATTTGATATACGTTGCGAAGTTTGTGATAAAACCTATGGTGATCTAGAACGCTTGGATGATCATTTGGTAGCGGCGCACCATTTTCGTAAGGACGAATTCTCTTGTGAGTTGTGTTCGAAACGTTTCTGTCATCGACCATCGCTGTTGAAGCATCGTGCATTAGTTCATAACGATATACGGAAATATCCTTGTGAGAATTGCACAAAGGTCTTTTGTGATCCATCGAATCTACAGCGACATATTCGTGCCCATCACGTTGGTGCCAGAAGTCACGCGTGTTCCGAGTGCGGCAAAACATTTGGCACTTCATCGGGTCTCAAACAACATACGCACATACATTCGTCAGTGAAACCATTCCAGTGTGAGGTCTGTTTCAAGGCATACACACAATTTTCCAATTTGTGTCGCCACAAGCGGATGCATGCTGATTGTCGCATGCAAATCAAATGCAACAAGTGCGGTCAGAGCTTCAGCACGGTCACATCCCTGTCGAAACATAAGCGCTTCTGTGATTCTACAACTGTTGCACCACCAGGAGTACCACCAGGTTTAGTGCCACCACCATCTCATTTGTCGCCACACCATCACCAGCACTCAGCACAATCCCGTGCCTTACAATCTGTTGCAGCCGCTGCAGGTACCGCTGGCTTAACACAAGCCGCTGCCAATATGACAACACCACCAAATCCGTTTTTCATGTTCCGCACGCCAACGTCATTCTTTCCAGGATTCCCTGCTGCCTATGGCTTACAAGGTATGTTCCCTCAAGGTCCAGCACAGGCGGCGAACTTTCCACTGCTATTTCCTAAGCATAACTTGGATATGCGGATGCCACTGTTACGCTCAATGTCGATGGAGAAGCCGCCATTGCATAAGCATAGCTTATCACCACCACATGCGATGCTACAACATCCGGCGGATTATAGTGAAGAGCAAAATATGCGGCGTACGACATCGCTGGAGTCCAAGCATTTGCTCGGTGCTCATGTTGAGAATCAGAATTCATTTGGCACACTGGATATATCGCAGCCTCTGCCTTTTTCAATGGAAACGTACAGTAAAACCTTTGCCACTAGCTCTCCTGCACCGAAGAATAATAATTTCCATGACTCCTTTGTTTCGGATGAAGAGACAAATAGTTCTATAGAATTGAAAATTGAGCCTGATGATGAAAATTTAGAAGCAGAAGATAACAACAACAAGGATTCAGAAGAGGATAAGAAGCCGATTGATATTGTCAGCACTCCACCACCCAATGATTCTTGCTCGAAAGAATCACAAAATGTAGAGCAGCCTTTAGATCTTACAATGACGCGTAAACGTTCAAATACGGATAACAATAATGCAACCGGTGAAGACAAGTCCTTACAACAGCAGGTGCTGGATAACGGCAAATCCAAAGACGAGGACCAAATAGCAGCAAAACGTTTGCGCATTACCACTGAACAACCACTTAGCTTTGCAATGAATCGCAAGCGACAGCGCACCGAAAGCAACAGCACTACCGCAGAAATCAAATCGAACAACAGCCAAGATATGGACACTGAAGAGCATAAGGTTGTGGGTAAATGCAAAAATCGCGAGCCAGAAAGACCGCAAGAATCAAAGCAACTGCGTTCTGCATCGCATTCGTCGCGCACATCATTTCAAGATACCAGCAGCCCTAGACCTTCAGTTTCACCGGTACCAACACCATCGCCTTCACCACCGAACTGCCAAGGAAAAATCCCGATGCCATGTCCACGTCCCATACATCCAATGATACTCGAAGAAATTTATCGTACACGTGCTTTGGCATTTCAACAGCCACGTGCTTTAGCGTTTCCTTTTTTAGGAGCAATGGGCGGACGGCCAGCCTTTGAACACTTGGTGCGTCCTCGAAATGGACTGTTTCCGCCCGAGCCCGCATATCCCGATGCCGCACTAATGACGGCGGGCAAAATAAAGGATCGTTACACCTGTAAATTCTGTGGCAAAGTGTTTCCACGCTCTGCCAACTTAACGCGTCACTTGCGCACGCACACCGGTGAGCAGCCATACACATGCAAGTATTGCGATAGAGCATTTAGCATTTCCTCGAATCTTCAACGTCATGTGCGCAACATACACAATAAAGAGCGTCCTTTCCGCTGTCATCTTTGCGATCGTTGCTTTGGTCAACAAACAAATCTCGATCGGCATCTTAAGAAGCATGAAGCTGATACCACAGGACTTGGTATTGGTCTTGGCGATTCGCCATCATCTAACGAGGCAGATCGTGAAGATTCTTACTTTGATGAAATACGTTCCTTCATGGGTCAAGTGACTTATAATGAGGAGTTATATACACCGACCAGCTTAGGAGGCGGAGAAAATGACACCGATTACGCTGCAAGCGATGCTGAAAATGAGCTGTCCGTGTCGAGAGCATCATCAGCGGAAGAACAGGCGAAAGGCGCTCTTAATAACAACGAAGCTATTGAGGTTAATACGTAG
Protein Sequence: MSRSHRDRQSLVVDSEIRFVVSHRIAAVNHCVTDSCGQHVASVAPSYGKPPTQASPQLKAMIPANGDEYDSSAHHHNLVNFHHNELHPQLVATGVPPYAKEAFEFKHHLATTLQHNGHNLPLQTPHNHHSNNSRIGAVGGPQNYSLSPNNSGDSTTSPAPLRSPTRTTTPTPLHVLQTATPGELSRHPPPHLHSAAPANPLQPNMDQLFNSKMHAERFLSEMARLQEPICDLNISDRGVFAKVPLHRSTRYGPFAVKLCSDPTDRKLAWEVIASPHFRGWLEPMPEISTWLRKIRAVLTSKEANLKNFLVAGYLWYETSRDIAAGEEITIDGRPKTPLHLNENFLNSSGNAGSVHGDDKSERENGSQYSGNTTGDDEINTSTNENEKQYPEQTDLHFSDDEHGFDIRCEVCDKTYGDLERLDDHLVAAHHFRKDEFSCELCSKRFCHRPSLLKHRALVHNDIRKYPCENCTKVFCDPSNLQRHIRAHHVGARSHACSECGKTFGTSSGLKQHTHIHSSVKPFQCEVCFKAYTQFSNLCRHKRMHADCRMQIKCNKCGQSFSTVTSLSKHKRFCDSTTVAPPGVPPGLVPPPSHLSPHHHQHSAQSRALQSVAAAAGTAGLTQAAANMTTPPNPFFMFRTPTSFFPGFPAAYGLQGMFPQGPAQAANFPLLFPKHNLDMRMPLLRSMSMEKPPLHKHSLSPPHAMLQHPADYSEEQNMRRTTSLESKHLLGAHVENQNSFGTLDISQPLPFSMETYSKTFATSSPAPKNNNFHDSFVSDEETNSSIELKIEPDDENLEAEDNNNKDSEEDKKPIDIVSTPPPNDSCSKESQNVEQPLDLTMTRKRSNTDNNNATGEDKSLQQQVLDNGKSKDEDQIAAKRLRITTEQPLSFAMNRKRQRTESNSTTAEIKSNNSQDMDTEEHKVVGKCKNREPERPQESKQLRSASHSSRTSFQDTSSPRPSVSPVPTPSPSPPNCQGKIPMPCPRPIHPMILEEIYRTRALAFQQPRALAFPFLGAMGGRPAFEHLVRPRNGLFPPEPAYPDAALMTAGKIKDRYTCKFCGKVFPRSANLTRHLRTHTGEQPYTCKYCDRAFSISSNLQRHVRNIHNKERPFRCHLCDRCFGQQTNLDRHLKKHEADTTGLGIGLGDSPSSNEADREDSYFDEIRSFMGQVTYNEELYTPTSLGGGENDTDYAASDAENELSVSRASSAEEQAKGALNNNEAIEVNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00972429;
90% Identity: iTF_00972429;
80% Identity: -