Basic Information

Insect: Tricholauxania praeusta
Gene Symbol: -
Assembly: GCA_949775025.1
Location: OX459029.1:141554454-141564985[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.088 12 7.9 4.5 1 23 182 205 182 205 0.95

2 18 0.00013 0.017 16.8 2.9 1 22 213 234 213 234 0.96

3 18 7e-05 0.0091 17.6 3.5 1 23 243 265 243 265 0.98

4 18 0.0041 0.53 12.1 2.7 1 23 271 294 271 294 0.95

5 18 0.013 1.7 10.5 0.8 1 23 299 323 299 323 0.91

6 18 1.3 1.7e+02 4.2 4.4 1 18 329 346 329 352 0.85

7 18 0.00084 0.11 14.2 3.8 1 23 531 553 531 553 0.98

8 18 1.3 1.6e+02 4.2 0.2 1 23 559 583 559 583 0.90

9 18 5.1e-05 0.0067 18.1 2.4 3 23 594 614 592 614 0.96

10 18 3.1e-07 4e-05 25.1 1.2 1 23 620 643 620 643 0.97

11 18 0.0013 0.17 13.6 0.4 1 23 648 672 648 672 0.94

12 18 2.8 3.6e+02 3.2 0.2 1 9 678 686 678 693 0.81

13 18 0.00084 0.11 14.2 3.8 1 23 745 767 745 767 0.98

14 18 0.00054 0.071 14.8 1.0 2 23 870 891 869 891 0.96

15 18 8.1e-05 0.011 17.4 0.1 2 23 929 950 928 950 0.96

16 18 2.1e-06 0.00028 22.4 1.7 1 23 956 979 956 979 0.97

17 18 0.0059 0.77 11.6 0.5 1 23 984 1008 984 1008 0.96

18 18 4.5e-05 0.0058 18.3 0.6 1 23 1013 1036 1013 1036 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.088	12	7.9	4.5	1	23	182	205	182	205	0.95
2	18	0.00013	0.017	16.8	2.9	1	22	213	234	213	234	0.96
3	18	7e-05	0.0091	17.6	3.5	1	23	243	265	243	265	0.98
4	18	0.0041	0.53	12.1	2.7	1	23	271	294	271	294	0.95
5	18	0.013	1.7	10.5	0.8	1	23	299	323	299	323	0.91
6	18	1.3	1.7e+02	4.2	4.4	1	18	329	346	329	352	0.85
7	18	0.00084	0.11	14.2	3.8	1	23	531	553	531	553	0.98
8	18	1.3	1.6e+02	4.2	0.2	1	23	559	583	559	583	0.90
9	18	5.1e-05	0.0067	18.1	2.4	3	23	594	614	592	614	0.96
10	18	3.1e-07	4e-05	25.1	1.2	1	23	620	643	620	643	0.97
11	18	0.0013	0.17	13.6	0.4	1	23	648	672	648	672	0.94
12	18	2.8	3.6e+02	3.2	0.2	1	9	678	686	678	693	0.81
13	18	0.00084	0.11	14.2	3.8	1	23	745	767	745	767	0.98
14	18	0.00054	0.071	14.8	1.0	2	23	870	891	869	891	0.96
15	18	8.1e-05	0.011	17.4	0.1	2	23	929	950	928	950	0.96
16	18	2.1e-06	0.00028	22.4	1.7	1	23	956	979	956	979	0.97
17	18	0.0059	0.77	11.6	0.5	1	23	984	1008	984	1008	0.96
18	18	4.5e-05	0.0058	18.3	0.6	1	23	1013	1036	1013	1036	0.96

Sequence Information

Coding Sequence: atggTTTCTCAATCGTTGCCACAATTTACAGAATTGGACTACAAAACCGATCTTTGTattaaagaagaagaactaGAAACTGAAGAAGATGATGAAAATTATGAGGGCTTAACATTTGACAATAATGCAGCTAAGAGTCAAATCAAAACTAATGAAGACCatgatatcaaaaaagaaattctAGAAAAACTATCGGATTCAGAAAATGAAATcgatgaaaatttcaattttgatgaTTTATATGACAAAGTTTTCGAAGATATTAACAGCGATCAGCAGGAAACAGatacatcaaaaataaaaataatcaaattaaaaCGCCGACGTGGACGACCACGTCACAATCACCTTGACGAAGAAGATGATCCTGATATTTTGTATGATGAAGTAGTATTTTGCGAAAACAAACCATCATCAAAGAAAAGGCAACAGGATGAACAACAAGGGTCAACTTCAACAACTGAAGGGCTTGAAtcaaatacaaatgaaaaaccTCAACGTAAAAGAGGTCCACCCGTTAAGTATGCAGTGCAAGGACCACCATTTGAATGTGAAATTTGCCATGTCGTTTGTAAAAATCGTTTACTTCTCAATTCACATCGATTTCGGAAACATCGTCCTCAAGAAGCCCCACAATATCCTTGTACGAAATGTGACCGCAAGTTTCATACAAAACAATCCATGGAGCGTCATATGCGTCGTCCAACATGTGAGGCCTACCCACATTTTGAGTGTGAACATTGTGGAAAGACATGCATCGGTCTCAGCAACTATAATATTCATATGCGTTTCCATAAGCGACAATATCCATTTGTTTGTCATTTGTGTGGTAAAAAATTCATGATGCGCGTGCATATGAATGAACATGTGCTGGTGAAGCATGAAAACAAGCGATACCCCTGTGAATTTCCAGGATGTGGAAAGCAGTTTCAAACACGTAATTCACTGTATAATCATAGTTATCAGCATGCGGGTGTAATGCCATACGAGTGTGAATACTGTAAGCGAGGATATGCTTCGAAGTCTAGacTACGTTTTCACTGCAAAAAGTCACATTCCATTGACCATACAATTGACGAACTGGATCGCATGCAAGTTACTGAAAAGCTACCAAATGTCGTAGTGAAGCCACAGCAGACCAAGAACTTACAGAGAACATCAACATCTACAACTGATGAGGCTTTAATCGAaaacttttctttcaaaaaagagTACTTTGACGACGTAGATAAACGTGAACACAATGgtgaaattaaaatcatttcagCACCCACGGTCATAGGGCagcaattgaaaattgaatGCGTAGTAAAAAATGAACTAGAAGTAGCCAATAGTTTTATTGATGTGATTGACAACGAAATTGAAGTAACAAGTGAGGAATTTTTTCCAATACAACAAATTGAAAATCATAAAACTAATGAAACCCAAAGAAATGAACTCATATGGGAAGCAGAAGAAGCGCACTGTATACCCTCACTTGAGAATAAAACGCAAAGAGAAGAACTGGAACATGGAACTGAACTTATCACTCCAGAAGTTTCGTGCACCTCCGATGTGAATATCATACAATTGGAAACACGTCCACAGTATGTGTGCGCTGTGTGTGGCAAACATTTTGTGATGTTCCGTCATTACAATGTGCACTTGCGCAAACACAATATCAATAGTCTGTATAAAtgtgaaatttgtgaaaatgtagCATTTCTTCGCTTGCGTGCCCTACAGCGTCATATCGTAAGAAGGCACACTGGCGTAGCGCAAGAGAACACGCAACATTGTGCTGTCTGTGATAAGTATTTCCGTTCGAAATATGCTCTCAAAATACACATGCGTTTTCATACCGGCATTTTGCCATTCGTCTGTGCAACCTGCGGTAAACGTTTCTCGGATAATGGTCATTTGCAACAGCACATTCGTGTGAAGCATGAACAATTTCGTTTTAAATGTGATCGCCCTGAATGTGGCAGAACTTTTGAATCCGATCGATCTTTAAGAAATCATGTCTATGGACATGACAACAGCTGGCCTTATGTGTGTGCGCACTGTGGCAAAGGCATTGGCACAAAATATGAAAATGAACTCGTGTGGGAAGCAGAAGAAGCGCACTGTATACCCTCACTTGAGAATGAAACGCAAAGAGAAGAACTGGAACATGGAACTGAACTTATCACTCCAGAAGTTTCACGCACCTCCGATGTGAATATCATACAATTGGAAACACGTCCACAGTATGTGTGCGCTGTGTGTGGCAAACATTTTGTGATGTTCCGTCATTACAATGTGCACTTGCGCAAACACAATATCAATAaaaatgttgaatatagCATAATGGAAAAATCGCCGGAACATCAGACTTACTACGAATTTGAACCTGAAACTGCAAGTCAGGTGCCATCCAGAAGTAACAATAAAGAaatgcagcagcaacagttaaaaatagcaaatataaCGCACAACGATCATCTCATCACAGAAAGTAGCAATGCTGCAACTACTACACGgccagaaaaagaaaaacttattgcTCCAATAAAAACAgctacagcaacagcagcagcttcATCACCACAACATTACAGTAAATGCTATGTTAAGCCCCAAATTGTCTGTGATATTTGTAGAAAAACTTTTACGACTAAAACTCGAATGCTATGGCATCGAAAAATACACGATAAAAACCGTGTGAAATTTCCGTGTCCTGACGTGTCCTGTAGACGCGTATACTCAACAAAACAGGCCTGTGATGTACATTTTAAGCAGAATCATCTGGTCGAAGGACTCGTGTGTCCGGTGTGCTCAAAAGTTTTTATCGTACGACAAAGTCTGGAGGTACACTTGCGATACCATACTGGTGAATATCCATATGTCTGTAATATATGTGACAAACGTTATGGCCAAAAAGGACATCTGACAACGCACATGCAAGTGAAGCATAATAATTTGCGCTACTATTGCCCAGAACCAGGTtgtatgaaaatattcaaaaatagcaTGTCACTGCGCAACCATCGATTTATTCATACGGAAATGCCGTTCAAGTGCGCATATTGTGAAAAAGGTTATCCACAGAAGTCAAAgcTTAAAgttcatataaatggcaaacACAACTTGGATGTTTCATTCGAAGATTTGGAATTAATGCGTAGATTTCAGGATTCACGTACGCACTACTCTTTTCTAAAAGTTGAAATTGAAGATGAAGACGATGCGATGAAAGAAGATGTAGCAGCAATGGAGGAAATTGTTGTTACTGAACCAACGGAGAGAATTCTAAGTTAA
Protein Sequence: MVSQSLPQFTELDYKTDLCIKEEELETEEDDENYEGLTFDNNAAKSQIKTNEDHDIKKEILEKLSDSENEIDENFNFDDLYDKVFEDINSDQQETDTSKIKIIKLKRRRGRPRHNHLDEEDDPDILYDEVVFCENKPSSKKRQQDEQQGSTSTTEGLESNTNEKPQRKRGPPVKYAVQGPPFECEICHVVCKNRLLLNSHRFRKHRPQEAPQYPCTKCDRKFHTKQSMERHMRRPTCEAYPHFECEHCGKTCIGLSNYNIHMRFHKRQYPFVCHLCGKKFMMRVHMNEHVLVKHENKRYPCEFPGCGKQFQTRNSLYNHSYQHAGVMPYECEYCKRGYASKSRLRFHCKKSHSIDHTIDELDRMQVTEKLPNVVVKPQQTKNLQRTSTSTTDEALIENFSFKKEYFDDVDKREHNGEIKIISAPTVIGQQLKIECVVKNELEVANSFIDVIDNEIEVTSEEFFPIQQIENHKTNETQRNELIWEAEEAHCIPSLENKTQREELEHGTELITPEVSCTSDVNIIQLETRPQYVCAVCGKHFVMFRHYNVHLRKHNINSLYKCEICENVAFLRLRALQRHIVRRHTGVAQENTQHCAVCDKYFRSKYALKIHMRFHTGILPFVCATCGKRFSDNGHLQQHIRVKHEQFRFKCDRPECGRTFESDRSLRNHVYGHDNSWPYVCAHCGKGIGTKYENELVWEAEEAHCIPSLENETQREELEHGTELITPEVSRTSDVNIIQLETRPQYVCAVCGKHFVMFRHYNVHLRKHNINKNVEYSIMEKSPEHQTYYEFEPETASQVPSRSNNKEMQQQQLKIANITHNDHLITESSNAATTTRPEKEKLIAPIKTATATAAASSPQHYSKCYVKPQIVCDICRKTFTTKTRMLWHRKIHDKNRVKFPCPDVSCRRVYSTKQACDVHFKQNHLVEGLVCPVCSKVFIVRQSLEVHLRYHTGEYPYVCNICDKRYGQKGHLTTHMQVKHNNLRYYCPEPGCMKIFKNSMSLRNHRFIHTEMPFKCAYCEKGYPQKSKLKVHINGKHNLDVSFEDLELMRRFQDSRTHYSFLKVEIEDEDDAMKEDVAAMEEIVVTEPTERILS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -